FFCP PHASE1:Hg19::chr8:32504622..32504647,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:32504622..32504647,+
|short_description=p7@NRG1
|description=CAGE_peak_7_at_NRG1_5end
|association_with_transcript=371bp_to_NM_013959,uc003xiy.2,uc010lvt.2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3084 | |EntrezGene=3084 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7997 | |HGNC=7997 | ||
|TSSclassifier=strong | |||
|UniProt=Q02297 | |UniProt=Q02297 | ||
|association_with_transcript=371bp_to_NM_013959,uc003xiy.2,uc010lvt.2_5end | |||
|cluster_id=chr8:32504622..32504647,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_7_at_NRG1_5end | |||
|id=chr8:32504622..32504647,+ | |||
|ontology_enrichment_celltype=CL:0002620!6.93e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002605;7.23e-12;3!CL:0000047;1.76e-08;2!CL:0000333;2.41e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.26e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.32e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.16e-40!82;UBERON:0005743!1.59e-39!86;UBERON:0000073!3.23e-39!94;UBERON:0001016!3.23e-39!94;UBERON:0001049!2.83e-37!57;UBERON:0005068!2.83e-37!57;UBERON:0006241!2.83e-37!57;UBERON:0007135!2.83e-37!57;UBERON:0002616!2.06e-31!59;UBERON:0000955!1.16e-30!69;UBERON:0006238!1.16e-30!69;UBERON:0003075!3.89e-30!86;UBERON:0007284!3.89e-30!86;UBERON:0002346!4.86e-28!90;UBERON:0007023!6.45e-27!115;UBERON:0002780!1.56e-26!41;UBERON:0001890!1.56e-26!41;UBERON:0006240!1.56e-26!41;UBERON:0003080!1.17e-25!42;UBERON:0002020!1.90e-25!34;UBERON:0003528!1.90e-25!34;UBERON:0001869!4.00e-25!32;UBERON:0001893!6.56e-25!34;UBERON:0002791!1.20e-23!33;UBERON:0004121!1.60e-23!169;UBERON:0000924!1.77e-22!173;UBERON:0006601!1.77e-22!173;UBERON:0000033!1.75e-18!123;UBERON:0003056!2.72e-18!61;UBERON:0000956!5.67e-18!25;UBERON:0000203!5.67e-18!25;UBERON:0000153!1.07e-17!129;UBERON:0007811!1.07e-17!129;UBERON:0002619!2.15e-14!22;UBERON:0001950!2.57e-14!20;UBERON:0003076!1.08e-12!15;UBERON:0003057!1.08e-12!15;UBERON:0004733!1.87e-09!12;UBERON:0002028!1.87e-09!12;UBERON:0007277!1.87e-09!12;UBERON:0002308!5.43e-09!9;UBERON:0000125!5.43e-09!9;UBERON:0004732!1.53e-08!13;UBERON:0000025!2.77e-08!194;UBERON:0000467!6.75e-08!625;UBERON:0000480!7.87e-08!626;UBERON:0000475!1.23e-07!365;UBERON:0004111!1.56e-07!241;UBERON:0000062!3.00e-07!511;UBERON:0002298!5.51e-07!8;UBERON:0000468!6.54e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;8.89e-24;34!UBERON:0002020;8.89e-24;34!UBERON:0001869;2.36e-22;32!UBERON:0002298;3.68e-22;6!UBERON:0000073;5.79e-21;53!UBERON:0002616;5.79e-21;53!UBERON:0000956;1.19e-20;25!UBERON:0000203;1.19e-20;25!UBERON:0001893;1.97e-20;34!UBERON:0002791;7.55e-20;32!UBERON:0004733;9.56e-19;12!UBERON:0002028;9.56e-19;12!UBERON:0000955;2.08e-17;68!UBERON:0004732;3.38e-17;13!UBERON:0002780;3.95e-17;41!UBERON:0001890;3.95e-17;41!UBERON:0001016;1.29e-15;83!UBERON:0001950;3.33e-15;20!UBERON:0001017;1.82e-14;75!UBERON:0002619;1.04e-13;22!UBERON:0000988;1.95e-12;3!UBERON:0001872;7.77e-12;5!UBERON:0001896;1.77e-11;3!UBERON:0005290;1.77e-11;3!UBERON:0002680;1.89e-10;9!UBERON:0001895;1.89e-10;9!UBERON:0001905;3.70e-09;2!UBERON:0002757;3.70e-09;2!UBERON:0010134;3.70e-09;2!UBERON:0005408;3.70e-09;2!UBERON:0001899;3.70e-09;2!UBERON:0002148;9.13e-09;2!UBERON:0006331;9.13e-09;2!UBERON:0009662;9.13e-09;2!UBERON:0000013;2.41e-07;5!UBERON:0002410;2.41e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.04e-40,89;UBERON:0001049,7.77e-40,56;UBERON:0005068,7.77e-40,56;UBERON:0006241,7.77e-40,56;UBERON:0007135,7.77e-40,56;UBERON:0000073,3.33e-39,53;UBERON:0002616,3.33e-39,53;UBERON:0001017,4.50e-37,81;UBERON:0000955,8.51e-34,68;UBERON:0006238,8.51e-34,68;UBERON:0003075,2.43e-27,82;UBERON:0007284,2.43e-27,82;UBERON:0002346,9.32e-26,86;UBERON:0003528,1.30e-25,34;UBERON:0002020,1.30e-25,34;UBERON:0001869,6.10e-24,32;UBERON:0002780,1.47e-23,41;UBERON:0001890,1.47e-23,41;UBERON:0003080,1.47e-23,41;UBERON:0006240,1.47e-23,41;UBERON:0001893,2.37e-22,34;UBERON:0002298,6.81e-22,6;UBERON:0004121,3.87e-21,171;UBERON:0000924,3.87e-21,171;UBERON:0006601,3.87e-21,171;UBERON:0002791,8.06e-21,32;UBERON:0000956,1.54e-20,25;UBERON:0000203,1.54e-20,25;UBERON:0010371,3.92e-20,104;UBERON:0004733,1.19e-18,12;UBERON:0002028,1.19e-18,12;UBERON:0007277,1.19e-18,12;UBERON:0003076,2.43e-18,15;UBERON:0003057,2.43e-18,15;UBERON:0011216,1.16e-17,223;UBERON:0004732,4.15e-17,13;UBERON:0003056,2.20e-16,61;UBERON:0010314,9.97e-16,132;UBERON:0001950,3.33e-15,20;UBERON:0002619,1.04e-13,22;UBERON:0000988,2.12e-12,3;UBERON:0001872,4.80e-12,5;UBERON:0001896,3.00e-11,3;UBERON:0005290,3.00e-11,3;UBERON:0010096,3.00e-11,3;UBERON:0002680,1.70e-10,9;UBERON:0001895,1.70e-10,9;UBERON:0010092,1.70e-10,9;UBERON:0000025,1.88e-10,192;UBERON:0004111,3.39e-09,240;UBERON:0001905,3.79e-09,2;UBERON:0002757,3.79e-09,2;UBERON:0010134,3.79e-09,2;UBERON:0005408,3.79e-09,2;UBERON:0001899,3.79e-09,2;UBERON:0002148,9.89e-09,2;UBERON:0006331,9.89e-09,2;UBERON:0009662,9.89e-09,2;UBERON:0007023,6.90e-08,114;UBERON:0000013,2.12e-07,5;UBERON:0002410,2.12e-07,5 | |||
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| ||
|short_description=p7@NRG1 | |||
}} | }} |
Latest revision as of 00:39, 18 September 2015
Short description: | p7@NRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NRG1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 371bp_to_NM_013959, uc003xiy.2, uc010lvt.2_5end |
EntrezGene: | NRG1 |
HGNC: | 7997 |
UniProt: | Q02297 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.26e-11 | 3 |