FFCP PHASE1:Hg19::chr1:33896680..33896704,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1912 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3183 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-27bp_to_ENST00000484692_5end | |||
|cluster_id=chr1:33896680..33896704,- | |||
|description=CAGE_peak_3_at_PHC2_5end | |||
|id=chr1:33896680..33896704,- | |||
|ontology_enrichment_celltype=CL:0000055!2.39e-13!180;CL:0002057!7.10e-09!42;CL:0000057!1.45e-07!75;CL:0000860!3.00e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.32e-09;33!CL:0002057;1.32e-09;33!CL:0000473;3.47e-09;39!CL:0000234;3.47e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.52e-09,48;CL:0000234,3.52e-09,48;CL:0000860,2.28e-08,42;CL:0002057,2.28e-08,42;CL:0002194,4.35e-07,59;CL:0000576,4.35e-07,59;CL:0000040,4.35e-07,59;CL:0000559,4.35e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;8.81e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.52e-20!57;UBERON:0005068!2.52e-20!57;UBERON:0006241!2.52e-20!57;UBERON:0007135!2.52e-20!57;UBERON:0002346!2.75e-20!90;UBERON:0000073!4.89e-20!94;UBERON:0001016!4.89e-20!94;UBERON:0003075!1.14e-19!86;UBERON:0007284!1.14e-19!86;UBERON:0005743!1.39e-19!86;UBERON:0001017!1.74e-19!82;UBERON:0002616!1.49e-18!59;UBERON:0000955!1.88e-18!69;UBERON:0006238!1.88e-18!69;UBERON:0000468!3.68e-17!659;UBERON:0002050!8.04e-17!605;UBERON:0005423!8.04e-17!605;UBERON:0000923!1.66e-16!604;UBERON:0005291!1.66e-16!604;UBERON:0006598!1.66e-16!604;UBERON:0002532!1.66e-16!604;UBERON:0000922!1.74e-16!612;UBERON:0000467!3.08e-16!625;UBERON:0000480!6.09e-16!626;UBERON:0001893!1.13e-14!34;UBERON:0002020!1.27e-14!34;UBERON:0003528!1.27e-14!34;UBERON:0002780!1.43e-14!41;UBERON:0001890!1.43e-14!41;UBERON:0006240!1.43e-14!41;UBERON:0003080!2.57e-14!42;UBERON:0003056!3.15e-14!61;UBERON:0002791!3.59e-14!33;UBERON:0001869!1.64e-13!32;UBERON:0000924!1.87e-13!173;UBERON:0006601!1.87e-13!173;UBERON:0004121!7.58e-13!169;UBERON:0000033!9.59e-13!123;UBERON:0000475!1.58e-12!365;UBERON:0000479!4.24e-11!787;UBERON:0000062!6.25e-11!511;UBERON:0000153!6.39e-11!129;UBERON:0007811!6.39e-11!129;UBERON:0000119!7.13e-11!312;UBERON:0002619!7.37e-11!22;UBERON:0007023!2.40e-10!115;UBERON:0000483!3.32e-10!309;UBERON:0001950!8.84e-10!20;UBERON:0000956!1.78e-09!25;UBERON:0000203!1.78e-09!25;UBERON:0002204!7.90e-09!167;UBERON:0000025!1.65e-07!194;UBERON:0000481!2.03e-07!347;UBERON:0003076!2.47e-07!15;UBERON:0003057!2.47e-07!15;UBERON:0000914!2.99e-07!83;UBERON:0002329!2.99e-07!83;UBERON:0003077!2.99e-07!83;UBERON:0003059!2.99e-07!83;UBERON:0007282!2.99e-07!83;UBERON:0009618!2.99e-07!83;UBERON:0007285!2.99e-07!83;UBERON:0004290!4.85e-07!70;UBERON:0002308!5.70e-07!9;UBERON:0000125!5.70e-07!9;UBERON:0002420!9.86e-07!9;UBERON:0007245!9.86e-07!9;UBERON:0010009!9.86e-07!9;UBERON:0010011!9.86e-07!9;UBERON:0000454!9.86e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.88e-14;34!UBERON:0003528;2.73e-14;34!UBERON:0002020;2.73e-14;34!UBERON:0002791;7.32e-14;32!UBERON:0001869;8.28e-14;32!UBERON:0002619;2.42e-13;22!UBERON:0000073;1.64e-12;53!UBERON:0002616;1.64e-12;53!UBERON:0002780;3.56e-12;41!UBERON:0001890;3.56e-12;41!UBERON:0001950;5.18e-12;20!UBERON:0000956;1.25e-10;25!UBERON:0000203;1.25e-10;25!UBERON:0001017;2.36e-10;75!UBERON:0001016;3.18e-09;83!UBERON:0000955;9.74e-09;68!UBERON:0000125;3.34e-08;9!UBERON:0002308;3.34e-08;9!UBERON:0002420;7.73e-08;9!UBERON:0007245;7.73e-08;9!UBERON:0010009;7.73e-08;9!UBERON:0010011;7.73e-08;9!UBERON:0000454;7.73e-08;9!UBERON:0009663;7.30e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.03e-23,56;UBERON:0005068,2.03e-23,56;UBERON:0006241,2.03e-23,56;UBERON:0007135,2.03e-23,56;UBERON:0000073,2.21e-21,53;UBERON:0002616,2.21e-21,53;UBERON:0002346,1.32e-20,86;UBERON:0001016,1.66e-20,89;UBERON:0001017,1.80e-20,81;UBERON:0003075,3.10e-20,82;UBERON:0007284,3.10e-20,82;UBERON:0000955,5.42e-19,68;UBERON:0006238,5.42e-19,68;UBERON:0001893,1.02e-16,34;UBERON:0003528,1.17e-16,34;UBERON:0002020,1.17e-16,34;UBERON:0002780,3.53e-16,41;UBERON:0001890,3.53e-16,41;UBERON:0003080,3.53e-16,41;UBERON:0006240,3.53e-16,41;UBERON:0002791,2.27e-15,32;UBERON:0001869,2.52e-15,32;UBERON:0010371,1.03e-14,104;UBERON:0003056,1.05e-14,61;UBERON:0010314,8.32e-14,132;UBERON:0002619,3.47e-13,22;UBERON:0000923,7.69e-13,560;UBERON:0010316,7.69e-13,560;UBERON:0005291,7.69e-13,560;UBERON:0006598,7.69e-13,560;UBERON:0010317,7.69e-13,560;UBERON:0002532,7.69e-13,560;UBERON:0002050,1.24e-12,564;UBERON:0004121,3.39e-12,171;UBERON:0000924,3.39e-12,171;UBERON:0006601,3.39e-12,171;UBERON:0001950,7.07e-12,20;UBERON:0000922,1.18e-11,592;UBERON:0005423,1.52e-11,581;UBERON:0002204,1.63e-10,167;UBERON:0000956,1.67e-10,25;UBERON:0000203,1.67e-10,25;UBERON:0007023,4.23e-10,114;UBERON:0000479,8.38e-09,773;UBERON:0003076,1.50e-08,15;UBERON:0003057,1.50e-08,15;UBERON:0000119,2.95e-08,309;UBERON:0007503,3.00e-08,78;UBERON:0000125,4.13e-08,9;UBERON:0002308,4.13e-08,9;UBERON:0002420,8.00e-08,9;UBERON:0007245,8.00e-08,9;UBERON:0010009,8.00e-08,9;UBERON:0010011,8.00e-08,9;UBERON:0000454,8.00e-08,9;UBERON:0003077,8.24e-08,72;UBERON:0007285,8.24e-08,72;UBERON:0000483,1.27e-07,306;UBERON:0007524,1.67e-07,73;UBERON:0002329,2.29e-07,71;UBERON:0003059,2.29e-07,71;UBERON:0007282,2.29e-07,71;UBERON:0004290,2.29e-07,71;UBERON:0009618,2.29e-07,71;UBERON:0004732,7.07e-07,13;UBERON:0009663,8.32e-07,7 | |||
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| |||
|short_description=p3@PHC2 | |||
}} |
Latest revision as of 17:25, 17 September 2015
Short description: | p3@PHC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PHC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_ENST00000484692_5end |
EntrezGene: | PHC2 |
HGNC: | 3183 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.52e-09 | 48 |
phagocyte | 3.52e-09 | 48 |
classical monocyte | 2.28e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.28e-08 | 42 |
monopoietic cell | 4.35e-07 | 59 |
monocyte | 4.35e-07 | 59 |
monoblast | 4.35e-07 | 59 |
promonocyte | 4.35e-07 | 59 |