FFCP PHASE1:Hg19::chr5:87969130..87969153,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=645323 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42810 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000505030,NR_024384_5end | |||
|cluster_id=chr5:87969130..87969153,- | |||
|coexpression_cluster_id=C561 | |||
|description=CAGE_peak_1_at_LINC00461_5end | |||
|id=chr5:87969130..87969153,- | |||
|ontology_enrichment_celltype=CL:0002319!2.35e-13!25;CL:0000128!2.04e-09!7;CL:0000126!2.04e-09!7;CL:0000127!2.04e-09!7;CL:0002453!2.04e-09!7;CL:0000133!1.75e-08!59;CL:0000095!4.99e-08!17;CL:0000123!4.99e-08!17;CL:0000243!5.60e-08!15;CL:0000125!5.60e-08!15;CL:0000030!5.60e-08!15;CL:0000339!5.60e-08!15;CL:0000047!3.09e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000128;2.29e-13;7!CL:0000126;2.29e-13;7!CL:0000127;2.29e-13;7!CL:0002319;1.11e-12;25!CL:0000095;6.90e-08;17!CL:0000243;1.64e-07;15!CL:0000125;1.64e-07;15!CL:0002605;3.07e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.38e-13,7;CL:0000126,2.38e-13,7;CL:0000127,2.38e-13,7;CL:0002453,2.38e-13,7;CL:0002319,1.15e-12,25;CL:0000095,7.05e-08,17;CL:0000123,7.05e-08,17;CL:0000243,1.66e-07,15;CL:0000125,1.66e-07,15;CL:0000030,1.66e-07,15;CL:0000339,1.66e-07,15;CL:0002605,3.04e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.12e-14;82!CL:0000339;1.64e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.92e-67!82;UBERON:0005743!4.39e-65!86;UBERON:0000073!4.71e-65!94;UBERON:0001016!4.71e-65!94;UBERON:0000955!9.90e-56!69;UBERON:0006238!9.90e-56!69;UBERON:0001049!4.73e-55!57;UBERON:0005068!4.73e-55!57;UBERON:0006241!4.73e-55!57;UBERON:0007135!4.73e-55!57;UBERON:0002616!4.41e-53!59;UBERON:0002346!3.16e-45!90;UBERON:0003075!4.47e-42!86;UBERON:0007284!4.47e-42!86;UBERON:0002780!1.67e-39!41;UBERON:0001890!1.67e-39!41;UBERON:0006240!1.67e-39!41;UBERON:0007023!1.01e-38!115;UBERON:0003080!3.22e-38!42;UBERON:0001893!2.55e-37!34;UBERON:0002020!3.69e-37!34;UBERON:0003528!3.69e-37!34;UBERON:0002791!3.93e-36!33;UBERON:0001869!3.24e-35!32;UBERON:0000924!4.42e-33!173;UBERON:0006601!4.42e-33!173;UBERON:0004121!1.63e-30!169;UBERON:0003056!5.82e-30!61;UBERON:0000033!6.98e-29!123;UBERON:0000956!1.50e-27!25;UBERON:0000203!1.50e-27!25;UBERON:0000153!2.34e-27!129;UBERON:0007811!2.34e-27!129;UBERON:0002619!8.14e-24!22;UBERON:0001950!1.32e-21!20;UBERON:0003076!1.64e-17!15;UBERON:0003057!1.64e-17!15;UBERON:0004732!3.89e-15!13;UBERON:0004733!2.92e-14!12;UBERON:0002028!2.92e-14!12;UBERON:0007277!2.92e-14!12;UBERON:0002680!3.24e-11!9;UBERON:0001895!3.24e-11!9;UBERON:0010092!3.24e-11!9;UBERON:0002308!6.05e-11!9;UBERON:0000125!6.05e-11!9;UBERON:0002420!7.15e-11!9;UBERON:0007245!7.15e-11!9;UBERON:0010009!7.15e-11!9;UBERON:0010011!7.15e-11!9;UBERON:0000454!7.15e-11!9;UBERON:0000025!1.66e-09!194;UBERON:0009663!7.32e-09!7;UBERON:0002037!3.37e-08!6;UBERON:0006215!3.37e-08!6;UBERON:0000200!7.44e-08!6;UBERON:0001871!1.07e-07!7;UBERON:0002298!2.45e-07!8;UBERON:0002021!3.87e-07!5;UBERON:0000349!5.54e-07!5;UBERON:0001872!5.96e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.46e-48;34!UBERON:0001869;1.93e-47;32!UBERON:0003528;2.07e-47;34!UBERON:0002020;2.07e-47;34!UBERON:0002791;3.18e-47;32!UBERON:0000073;3.86e-44;53!UBERON:0002616;3.86e-44;53!UBERON:0002780;2.44e-42;41!UBERON:0001890;2.44e-42;41!UBERON:0000956;6.08e-41;25!UBERON:0000203;6.08e-41;25!UBERON:0002619;2.60e-35;22!UBERON:0000955;3.62e-33;68!UBERON:0001017;7.60e-33;75!UBERON:0001950;5.83e-32;20!UBERON:0001016;1.49e-28;83!UBERON:0004732;6.79e-22;13!UBERON:0004733;1.39e-20;12!UBERON:0002028;1.39e-20;12!UBERON:0002680;4.89e-16;9!UBERON:0001895;4.89e-16;9!UBERON:0000125;1.15e-15;9!UBERON:0002308;1.15e-15;9!UBERON:0002420;1.52e-15;9!UBERON:0007245;1.52e-15;9!UBERON:0010009;1.52e-15;9!UBERON:0010011;1.52e-15;9!UBERON:0000454;1.52e-15;9!UBERON:0009663;1.55e-12;7!UBERON:0011216;1.39e-11;132!UBERON:0002037;1.62e-11;6!UBERON:0000200;5.59e-11;6!UBERON:0002298;9.56e-11;6!UBERON:0002021;5.96e-10;5!UBERON:0000349;1.00e-09;5!UBERON:0001872;1.15e-09;5!UBERON:0001871;1.72e-09;6!UBERON:0007023;5.54e-09;114!UBERON:0000369;3.87e-08;4!UBERON:0002435;3.87e-08;4!UBERON:0000204;3.87e-08;4!UBERON:0002784;6.13e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.30e-88,81;UBERON:0001049,4.52e-85,56;UBERON:0005068,4.52e-85,56;UBERON:0006241,4.52e-85,56;UBERON:0007135,4.52e-85,56;UBERON:0001016,6.81e-85,89;UBERON:0000073,8.80e-80,53;UBERON:0002616,8.80e-80,53;UBERON:0000955,3.67e-77,68;UBERON:0006238,3.67e-77,68;UBERON:0002346,1.65e-60,86;UBERON:0003075,1.01e-59,82;UBERON:0007284,1.01e-59,82;UBERON:0002780,1.60e-59,41;UBERON:0001890,1.60e-59,41;UBERON:0003080,1.60e-59,41;UBERON:0006240,1.60e-59,41;UBERON:0001893,1.12e-55,34;UBERON:0003528,1.96e-55,34;UBERON:0002020,1.96e-55,34;UBERON:0001869,1.68e-52,32;UBERON:0002791,3.63e-52,32;UBERON:0010371,4.10e-45,104;UBERON:0003056,1.38e-42,61;UBERON:0004121,1.31e-41,171;UBERON:0000924,1.31e-41,171;UBERON:0006601,1.31e-41,171;UBERON:0000956,6.21e-41,25;UBERON:0000203,6.21e-41,25;UBERON:0002619,2.68e-35,22;UBERON:0010314,3.65e-32,132;UBERON:0001950,5.75e-32,20;UBERON:0011216,3.48e-30,223;UBERON:0007023,7.89e-28,114;UBERON:0003076,1.63e-25,15;UBERON:0003057,1.63e-25,15;UBERON:0004732,6.11e-22,13;UBERON:0004733,1.27e-20,12;UBERON:0002028,1.27e-20,12;UBERON:0007277,1.27e-20,12;UBERON:0002680,4.76e-16,9;UBERON:0001895,4.76e-16,9;UBERON:0010092,4.76e-16,9;UBERON:0000125,1.22e-15,9;UBERON:0002308,1.22e-15,9;UBERON:0002420,1.56e-15,9;UBERON:0007245,1.56e-15,9;UBERON:0010009,1.56e-15,9;UBERON:0010011,1.56e-15,9;UBERON:0000454,1.56e-15,9;UBERON:0000025,1.22e-13,192;UBERON:0009663,1.62e-12,7;UBERON:0002037,1.59e-11,6;UBERON:0006215,1.59e-11,6;UBERON:0000200,5.21e-11,6;UBERON:0002298,8.91e-11,6;UBERON:0002021,6.13e-10,5;UBERON:0000349,1.05e-09,5;UBERON:0001872,1.17e-09,5;UBERON:0001871,1.75e-09,6;UBERON:0004111,3.45e-08,240;UBERON:0000369,3.94e-08,4;UBERON:0002435,3.94e-08,4;UBERON:0000204,3.94e-08,4;UBERON:0010082,3.94e-08,4;UBERON:0002784,6.29e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,20.5612166988236,8.16002764977012,29.1512890974622,63.8306251302256,29.8386246658888,56.7452730968509,0,0.0821005894499457,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945348171640679,0.221729397462564,0.263504357079378,3.92937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813357600086629,0.932949495138334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,59.1560553215632,0,0.171567810298526,0,0,0,0,0,0,0,15.3028134567101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.6878968693739,44.2475503115914,44.8507511411063,27.1376349841645,75.9147114467264,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,2.38080608527693,1.98022799809411,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0.37064843820784,0,0,3.48017367190598,0.190630193923825,0,0,0.95460974377781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.2681510275473,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,1.99843180798692,1.4098700508785,0,0,0,0.445773537109913,0,0,0,0,7.95318118213038,19.6937182974718,0,9.3938208309253,0.63337622438398,0.398495976502139,0.552567831062295,0,4.49982203009481,0.492339221844278,0,0,0,0,0.0986434056369336,0,0,31.9879806211422,15.3067361967055,93.8184850605613,0,0,0,0,0,0,6.89486746482929,100.603591617223,20.6613743970618,11.5146380155799,20.3807981276939,21.3614430843917,18.5773156684457,16.5506666613987,12.2855822406225,0,0,1.30815439456455,0,0,0,0,0,0,0,0,0,1.49590513710141,0,0,0,0,1.90723894776454,0,0,0,3.67860687561555,0.995261931078505,0.0884575645033392,1.83309043480088,23.7216902944498,20.2644859872265,27.2541288209239,18.8049161016089,0,34.4368735216249,0.182454789215666,0,0,0.394584402849391,0,58.1538247097931,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,10.8351200457118,0,0,0,1.06687918137261,0,15.3666903730762,0,0,20.8292518694841,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,12.1377878987223,0,13.2092463516154,14.1012540258753,0,0,13.1443677139657,0.558564802544508,0,0,0.399358000997982,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,15.1093641063768,21.1115279472942,0.160753148465019,0.137539436597234,0,0,0,18.3463661107234,0,0.315222829196793,0.472091293214983,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,1.01980882368113,0,0,18.3581798033402,13.223260174269,0,0,0,0,0,0,0,12.4228450348514,0,0,0,0,0,0,8.86068179966986,12.0806002252944,15.523675407606,12.6150023051816,11.4256923082958,19.8708489412427,0.691743174681154,2.74956897516635,0,0,0,0,1.44921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.4849448489938,0,0,0,0.327609848846413,0,0,14.399092501555,0,0,0,0,0,1.24415452006595,0,0,1.72992536041486,0,0.509197589862076,3.18862380152524,0.495743057036009,1.11728983594649,0,0,0.80057074828547,0,0,21.0671858316387,11.3357261060468,14.6863150332579,33.4339673712431,88.4771653738231,16.182797076627,27.4508597574147,5.71077681036618,0,0,0,0,0,0.690359926060101,0.795664888465099,0.526472298444801,0,0,0,0,0,20.6665008932288,5.46754669029693,13.2279549760758,16.2344474096401,102.284289286407,0,0,4.92439484206938,0,1.60710550763486,3.02655349996942,0,0,0,6.56833729067942,0,10.9431270092699,19.3371954274776,0,0,0.235479278551542,16.3400213512642,0,5.47895232305697,3.45484145949794,0,3.4308741204795,0,7.09072694745564,1.39086617842064,0,0,0,0,0,0.236664001461131,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.617393264863557,1.74847648403166,0,0.735444965261716,0,17.86407050746,8.31729920915841,70.5835065064278,0,0,0.193373663920732,0,0,0,0,0.730336388246517,0,9.89043123745014,0,19.3095832142198,109.087672585094,2.645134202577,0,0,0,0,1.96678029534652,0,0,0.534434810531121,0.0918948995348449,0,0.151557396436479,0.803892390468535,10.7792027129641,13.7565884496321,0.213233981900981,0,0,0,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0.244482888365733,3.66206560484165,0.665756774185513,0,0.641136984606466 | |||
|short_description=p1@LINC00461 | |||
}} |
Latest revision as of 03:05, 19 September 2015
Short description: | p1@LINC00461 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LINC00461_5end |
Coexpression cluster: | C561_brain_Neural_spinal_Neurons_parietal_temporal_occipital |
Association with transcript: | 0bp_to_ENST00000505030, NR_024384_5end |
EntrezGene: | LINC00461 |
HGNC: | 42810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.38e-13 | 7 |
macroglial cell | 2.38e-13 | 7 |
astrocyte | 2.38e-13 | 7 |
oligodendrocyte precursor cell | 2.38e-13 | 7 |
neural cell | 1.15e-12 | 25 |
neuron associated cell | 7.05e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 7.05e-08 | 17 |
glial cell (sensu Vertebrata) | 1.66e-07 | 15 |
glial cell | 1.66e-07 | 15 |
glioblast | 1.66e-07 | 15 |
glioblast (sensu Vertebrata) | 1.66e-07 | 15 |
astrocyte of the cerebral cortex | 3.04e-07 | 3 |