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FFCP PHASE1:Mm9::chr17:34768037..34768092,+: Difference between revisions

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(Created page with "{{FFCP |id=chr17:34768037..34768092,+ |short_description=p3@Prrt1 |description=CAGE_peak_3_at_Prrt1_5end |association_with_transcript=-256bp_to_ENSMUST00000172945_5end |E...")
 
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{{FFCP
{{FFCP
|id=chr17:34768037..34768092,+
|DHSsupport=NA
|short_description=p3@Prrt1
|DPIdataset=NA
|description=CAGE_peak_3_at_Prrt1_5end
|association_with_transcript=-256bp_to_ENSMUST00000172945_5end
|EntrezGene=260297
|EntrezGene=260297
|HGNC=
|HGNC=
|MCL_coexpression_id=113
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-256bp_to_ENSMUST00000172945_5end
|cluster_id=chr17:34768037..34768092,+
|description=CAGE_peak_3_at_Prrt1_5end
|id=chr17:34768037..34768092,+
|ontology_enrichment_celltype=CL:0000117!1.51e-07!23;CL:0000337!1.51e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,6.17e-10,23;CL:0000337,6.17e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!4.91e-20!86;UBERON:0000153!1.51e-18!94;UBERON:0001049!2.53e-17!52;UBERON:0005068!2.53e-17!52;UBERON:0006241!2.53e-17!52;UBERON:0007135!2.53e-17!52;UBERON:0002346!9.03e-17!71;UBERON:0003075!9.03e-17!71;UBERON:0007284!9.03e-17!71;UBERON:0000955!1.68e-16!50;UBERON:0006238!1.68e-16!50;UBERON:0002616!7.24e-16!49;UBERON:0000033!8.19e-16!63;UBERON:0002020!1.68e-14!34;UBERON:0004121!1.34e-13!102;UBERON:0000924!1.34e-13!102;UBERON:0006601!1.34e-13!102;UBERON:0003056!2.77e-13!49;UBERON:0001017!6.62e-13!73;UBERON:0005743!6.62e-13!73;UBERON:0003080!8.95e-13!40;UBERON:0002780!3.28e-12!39;UBERON:0001890!3.28e-12!39;UBERON:0006240!3.28e-12!39;UBERON:0002791!5.66e-12!29;UBERON:0003528!5.66e-12!29;UBERON:0001893!5.66e-12!29;UBERON:0000073!6.06e-12!75;UBERON:0001016!6.06e-12!75;UBERON:0000956!2.57e-08!21;UBERON:0001869!2.57e-08!21;UBERON:0000203!2.57e-08!21;UBERON:0002021!2.72e-08!10;UBERON:0000411!2.72e-08!10;UBERON:0001950!2.72e-08!10;UBERON:0000064!1.26e-07!99;UBERON:0002619!1.32e-07!17;UBERON:0000475!7.14e-07!200
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.81e-23,54;UBERON:0001049,2.91e-21,52;UBERON:0005068,2.91e-21,52;UBERON:0006241,2.91e-21,52;UBERON:0007135,2.91e-21,52;UBERON:0002020,8.53e-20,34;UBERON:0001017,2.90e-19,73;UBERON:0001016,1.88e-18,75;UBERON:0002346,1.01e-17,64;UBERON:0003075,1.01e-17,64;UBERON:0007284,1.01e-17,64;UBERON:0010371,1.32e-17,73;UBERON:0000955,5.62e-17,47;UBERON:0006238,5.62e-17,47;UBERON:0004121,6.20e-17,95;UBERON:0000924,6.20e-17,95;UBERON:0006601,6.20e-17,95;UBERON:0002616,5.85e-16,46;UBERON:0003528,3.44e-15,29;UBERON:0002791,3.44e-15,29;UBERON:0001893,3.44e-15,29;UBERON:0002021,9.45e-15,10;UBERON:0000411,9.45e-15,10;UBERON:0001950,9.45e-15,10;UBERON:0003080,2.28e-13,40;UBERON:0002780,1.83e-12,39;UBERON:0001890,1.83e-12,39;UBERON:0006240,1.83e-12,39;UBERON:0003056,1.10e-11,49;UBERON:0002619,5.23e-11,17;UBERON:0000483,7.65e-11,174;UBERON:0000119,1.47e-10,176;UBERON:0010314,4.38e-10,92;UBERON:0002370,6.62e-10,23;UBERON:0000974,6.62e-10,23;UBERON:0004807,6.62e-10,23;UBERON:0005058,6.62e-10,23;UBERON:0003351,6.62e-10,23;UBERON:0009113,6.62e-10,23;UBERON:0003295,6.62e-10,23;UBERON:0009722,6.62e-10,23;UBERON:0005562,6.62e-10,23;UBERON:0007690,6.62e-10,23;UBERON:0000956,6.76e-10,21;UBERON:0001869,6.76e-10,21;UBERON:0000203,6.76e-10,21;UBERON:0006562,2.49e-09,24;UBERON:0003408,2.49e-09,24;UBERON:0001557,2.49e-09,24;UBERON:0001042,2.49e-09,24;UBERON:0008814,2.49e-09,24;UBERON:0009145,2.49e-09,24;UBERON:0003076,3.93e-09,12;UBERON:0003057,3.93e-09,12;UBERON:0000072,7.19e-08,27;UBERON:0011216,8.55e-08,194;UBERON:0002240,3.63e-07,6;UBERON:0005174,3.63e-07,6;UBERON:0001137,3.63e-07,6;UBERON:0004177,4.51e-07,29;UBERON:0005057,4.51e-07,29;UBERON:0002420,9.80e-07,8;UBERON:0007245,9.80e-07,8;UBERON:0010009,9.80e-07,8;UBERON:0010011,9.80e-07,8;UBERON:0000454,9.80e-07,8
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0,0.274228867211478,0,2.12608225377674,0.496454756004426,0,0,0,0,0,0,0.380046838912748,0,0,0,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.659058548203415,0.194429899074283,0,0,0,0,0.336093799142464,0,0,0,0.202316460859598,2.11596391708813,1.26766280701236,0,0,0,0,1.4209602298922,0,0,0.414758449233911,0.405017814995072,0.210324961351382,1.71390590642282,4.19650227808066,0.122490799214954,0.191690942036473,0,3.30347642998166,5.36286819957788,4.76180253094355,1.05509030184155,1.00636407962651,1.56274011167028,3.35019598801657,3.37657566019008,3.81995619442025,3.83017161115768,3.70166370077668,1.1183966749518,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,1.03575153458869,1.03909497345377,0.346970653532272,0.608930956624282,0.230615497256059,0,0.352766121407114,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0,0,0,9.9545470983926,7.33063473847093,0,0.11981512450592,0,0.254140454146129,6.14141621559773,9.15001205637253,0.753926112677186,9.90798625095976,11.5071955798649,6.2336413367868,9.08551073179443,0.305518091550949,3.6078021476927,10.108910337347,1.05220927943237,0.130120442962704,0,0,0.452114453507145,0.612328492361951,0.768682321709099,0.937017245597288,1.81092359517311,0,0,0.351902248327898,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0.219550115291051,0.402619256281115,15.1408762966172,1.74937841044784,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0.379335801906163,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0.739012760666419,0,0,0,0,0.670025029767263,0.476087281772027,0,0.630540576424764,0,0.318909537314974,0.163863314715738,0.172684981865896,0.578596234326046,0,0,0,0,2.88991061978026,2.34423373184406,0,0,0,0,0.215423397732799,0,0,0,0,0,0,8.35435422696698,0.567760340833074,0.35613120733451,0.488660878060728,0.329940245945071,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0,0,0.886701168211368,0.178368817602071,0.493647061806363,0.304464949114599,0,0.21183207086382,0.661585194164886,2.63818004706368,0.161464426695906,0.542816324353403,1.43246812803764,3.28281799490123,0.291480836629851,3.70850604021019,0.170870880797853,0,0,0,0,0,0.169978429993855,0.419854356970974,0.414599921413271,0,0,0.203319467126849,0,0,0,0,0.330613822901344,0,0.129614973291793,0,0,0,0,0.972255941720238,0.645799117388655,0.675824501963113,0.352071715937262,0.911430693907651,1.67774951081137,0.724752362478018,0,17.696622755178,1.01362607645082,1.33524244314275,4.67714962720062,6.62398773969681,11.1261558677508,7.57231331975804,10.9290250109187,10.7024436945036,11.354814191595,13.1074040677893,12.6695244961678,13.2772341463655,13.4408437508804,0,0,0,0,0,0.563047426353546,0,0,0,16.3778034358949,14.2700823317225,17.7597609166213,9.79563139359019,4.7955776383945,16.6186657425734,8.10027000278167,10.3573876741571,7.25027854374727,8.28416498802912,0,0.798049746802062,0,0.243106717068294,0.209613162627982,0.735374033800057,0.666740183404846,0.412070114477788,0.320919209591815,0.252697211763798,0.760437899670719,0.565879024158229,0.468207537349412,0.448176066834085,0.287177344778066,0,0.231768651889711,0.38581844092741,0,0.441596760403192,0,0.354951612318675,0,0.436039249896986,0.282328141245992,0.25384382367503,0.548783918618318,1.31534855718921,0.271608227691724,0.561142271657738,0.118635018124174,0,1.63692417267876,0.77468420592983,0,0.249810577937946,0.701794825336225,0.429742108096597,0,0.441182838239031,0.463735671240843
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0,0.274228867211478,0,2.12608225377674,0.496454756004426,0,0,0,0,0,0,0.380046838912748,0,0,0,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.659058548203415,0.194429899074283,0,0,0,0,0.336093799142464,0,0,0,0.202316460859598,2.11596391708813,1.26766280701236,0,0,0,0,1.4209602298922,0,0,0.414758449233911,0.405017814995072,0.210324961351382,1.71390590642282,4.19650227808066,0.122490799214954,0.191690942036473,0,3.30347642998166,5.36286819957788,4.76180253094355,1.05509030184155,1.00636407962651,1.56274011167028,3.35019598801657,3.37657566019008,3.81995619442025,3.83017161115768,3.70166370077668,1.1183966749518,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,1.03575153458869,1.03909497345377,0.346970653532272,0.608930956624282,0.230615497256059,0,0.352766121407114,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0,0,0,9.9545470983926,7.33063473847093,0,0.11981512450592,0,0.254140454146129,6.14141621559773,9.15001205637253,0.753926112677186,9.90798625095976,11.5071955798649,6.2336413367868,9.08551073179443,0.305518091550949,3.6078021476927,10.108910337347,1.05220927943237,0.130120442962704,0,0,0.452114453507145,0.612328492361951,0.768682321709099,0.937017245597288,1.81092359517311,0,0,0.351902248327898,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0.219550115291051,0.402619256281115,15.1408762966172,1.74937841044784,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0.379335801906163,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0.739012760666419,0,0,0,0,0.670025029767263,0.476087281772027,0,0.630540576424764,0,0.318909537314974,0.163863314715738,0.172684981865896,0.578596234326046,0,0,0,0,2.88991061978026,2.34423373184406,0,0,0,0,0.215423397732799,0,0,0,0,0,0,8.35435422696698,0.567760340833074,0.35613120733451,0.488660878060728,0.329940245945071,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0,0,0.886701168211368,0.178368817602071,0.493647061806363,0.304464949114599,0,0.21183207086382,0.661585194164886,2.63818004706368,0.161464426695906,0.542816324353403,1.43246812803764,3.28281799490123,0.291480836629851,3.70850604021019,0.170870880797853,0,0,0,0,0,0.169978429993855,0.419854356970974,0.414599921413271,0,0,0.203319467126849,0,0,0,0,0.330613822901344,0,0.129614973291793,0,0,0,0,0.972255941720238,0.645799117388655,0.675824501963113,0.352071715937262,0.911430693907651,1.67774951081137,0.724752362478018,0,17.696622755178,1.01362607645082,1.33524244314275,4.67714962720062,6.62398773969681,11.1261558677508,7.57231331975804,10.9290250109187,10.7024436945036,11.354814191595,13.1074040677893,12.6695244961678,13.2772341463655,13.4408437508804,0,0,0,0,0,0.563047426353546,0,0,0,16.3778034358949,14.2700823317225,17.7597609166213,9.79563139359019,4.7955776383945,16.6186657425734,8.10027000278167,10.3573876741571,7.25027854374727,8.28416498802912,0,0.798049746802062,0,0.243106717068294,0.209613162627982,0.735374033800057,0.666740183404846,0.412070114477788,0.320919209591815,0.252697211763798,0.760437899670719,0.565879024158229,0.468207537349412,0.448176066834085,0.287177344778066,0,0.231768651889711,0.38581844092741,0,0.441596760403192,0,0.354951612318675,0,0.436039249896986,0.282328141245992,0.25384382367503,0.548783918618318,1.31534855718921,0.271608227691724,0.561142271657738,0.118635018124174,0,1.63692417267876,0.77468420592983,0,0.249810577937946,0.701794825336225,0.429742108096597,0,0.441182838239031,0.463735671240843
|short_description=p3@Prrt1
}}
}}

Latest revision as of 08:36, 26 September 2015

Short description:p3@Prrt1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Prrt1_5end
Coexpression cluster:MCL_coexpression_mm9:113
Association with transcript: -256bp_to_ENSMUST00000172945_5end
EntrezGene:Prrt1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Prrt1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B29.95
cerebellum, neonate N30.CNhs11135.1395-42I27.33
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A46.14
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D59.91
cortex, neonate N30.CNhs11107.1392-42F211.51
diencephalon, adult.CNhs10482.20-12F26.23
diencephalon, neonate N30.CNhs11201.1388-42B29.09
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.61
epididymis, adult.CNhs10490.58-23B210.11
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E815.14
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A32.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I98.35
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C43.28
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D91.68
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B517.70
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C54.68
thymus, embryo E17.CNhs10581.478-18C16.62
thymus, embryo E18.CNhs10595.1273-19G411.13
thymus, neonate N02.CNhs11181.1541-43F87.57
thymus, neonate N03.CNhs11137.2104-43C710.93
thymus, neonate N06.CNhs11197.681-26C410.70
thymus, neonate N07.CNhs11211.713-19D311.35
thymus, neonate N10.CNhs11194.748-24E413.11
thymus, neonate N20.CNhs11186.820-7A212.67
thymus, neonate N25.CNhs11125.1362-25G713.28
thymus, neonate N30.CNhs11132.1393-42G213.44
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.38
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.76
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.80
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A516.62
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.17e-1023
neuroblast (sensu Vertebrata)6.17e-1023

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.81e-2354
neural tube2.91e-2152
neural rod2.91e-2152
future spinal cord2.91e-2152
neural keel2.91e-2152
gray matter8.53e-2034
central nervous system2.90e-1973
nervous system1.88e-1875
neurectoderm1.01e-1764
neural plate1.01e-1764
presumptive neural plate1.01e-1764
ecto-epithelium1.32e-1773
brain5.62e-1747
future brain5.62e-1747
ectoderm-derived structure6.20e-1795
ectoderm6.20e-1795
presumptive ectoderm6.20e-1795
regional part of brain5.85e-1646
brain grey matter3.44e-1529
regional part of telencephalon3.44e-1529
telencephalon3.44e-1529
occipital lobe9.45e-1510
visual cortex9.45e-1510
neocortex9.45e-1510
anterior neural tube2.28e-1340
regional part of forebrain1.83e-1239
forebrain1.83e-1239
future forebrain1.83e-1239
pre-chordal neural plate1.10e-1149
regional part of cerebral cortex5.23e-1117
epithelium7.65e-11174
cell layer1.47e-10176
structure with developmental contribution from neural crest4.38e-1092
thymus6.62e-1023
neck6.62e-1023
respiratory system epithelium6.62e-1023
hemolymphoid system gland6.62e-1023
pharyngeal epithelium6.62e-1023
thymic region6.62e-1023
pharyngeal gland6.62e-1023
entire pharyngeal arch endoderm6.62e-1023
thymus primordium6.62e-1023
early pharyngeal endoderm6.62e-1023
cerebral cortex6.76e-1021
cerebral hemisphere6.76e-1021
pallium6.76e-1021
pharynx2.49e-0924
gland of gut2.49e-0924
upper respiratory tract2.49e-0924
chordate pharynx2.49e-0924
pharyngeal arch system2.49e-0924
pharyngeal region of foregut2.49e-0924
posterior neural tube3.93e-0912
chordal neural plate3.93e-0912
segment of respiratory tract7.19e-0827
organ system subdivision8.55e-08194
spinal cord3.63e-076
dorsal region element3.63e-076
dorsum3.63e-076
hemopoietic organ4.51e-0729
immune organ4.51e-0729
basal ganglion9.80e-078
nuclear complex of neuraxis9.80e-078
aggregate regional part of brain9.80e-078
collection of basal ganglia9.80e-078
cerebral subcortex9.80e-078
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