FFCP PHASE1:Hg19::chr11:30608248..30608277,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:30608248..30608277,- to FFCP PHASE1:Hg19::chr11:30608248..30608277,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=744 | |EntrezGene=744 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1180 | |HGNC=1180 | ||
|TSSclassifier=strong | |||
|UniProt=E9PB10,Q59GE6 | |UniProt=E9PB10,Q59GE6 | ||
|association_with_transcript=-318bp_to_NM_001145399,uc001msq.3_5end | |||
|cluster_id=chr11:30608248..30608277,- | |||
|coexpression_cluster_id=C3138 | |||
|description=CAGE_peak_3_at_MPPED2_5end | |||
|id=chr11:30608248..30608277,- | |||
|ontology_enrichment_celltype=CL:0002319!5.61e-08!25;CL:0000047!5.00e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002319;5.45e-07;25!CL:0000123;8.83e-07;2!CL:0000242;8.83e-07;2!CL:0000047;9.47e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.37e-09,8;CL:0002319,6.27e-07,25;CL:0000242,7.47e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.26e-14;82!UBERON:0010122;9.08e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.49e-58!82;UBERON:0005743!8.45e-57!86;UBERON:0001049!1.97e-55!57;UBERON:0005068!1.97e-55!57;UBERON:0006241!1.97e-55!57;UBERON:0007135!1.97e-55!57;UBERON:0007023!2.73e-55!115;UBERON:0000073!1.76e-51!94;UBERON:0001016!1.76e-51!94;UBERON:0002780!2.27e-47!41;UBERON:0001890!2.27e-47!41;UBERON:0006240!2.27e-47!41;UBERON:0000955!7.47e-47!69;UBERON:0006238!7.47e-47!69;UBERON:0002616!2.49e-46!59;UBERON:0003080!6.13e-46!42;UBERON:0001893!8.63e-45!34;UBERON:0002020!1.97e-44!34;UBERON:0003528!1.97e-44!34;UBERON:0002791!1.88e-43!33;UBERON:0001869!4.35e-43!32;UBERON:0003075!5.43e-39!86;UBERON:0007284!5.43e-39!86;UBERON:0002346!1.86e-36!90;UBERON:0000153!3.82e-34!129;UBERON:0007811!3.82e-34!129;UBERON:0000956!2.04e-33!25;UBERON:0000203!2.04e-33!25;UBERON:0004121!2.27e-33!169;UBERON:0000924!4.66e-32!173;UBERON:0006601!4.66e-32!173;UBERON:0000033!1.62e-31!123;UBERON:0003056!7.09e-31!61;UBERON:0002619!3.62e-30!22;UBERON:0001950!1.89e-27!20;UBERON:0004111!5.72e-14!241;UBERON:0002420!4.26e-13!9;UBERON:0007245!4.26e-13!9;UBERON:0010009!4.26e-13!9;UBERON:0010011!4.26e-13!9;UBERON:0000454!4.26e-13!9;UBERON:0000477!2.11e-12!286;UBERON:0002308!2.81e-12!9;UBERON:0000125!2.81e-12!9;UBERON:0000062!5.21e-12!511;UBERON:0000475!1.00e-11!365;UBERON:0000025!1.68e-11!194;UBERON:0003076!9.70e-11!15;UBERON:0003057!9.70e-11!15;UBERON:0009663!1.89e-10!7;UBERON:0000922!2.27e-10!612;UBERON:0000064!2.47e-10!219;UBERON:0000481!6.05e-10!347;UBERON:0001871!1.18e-09!7;UBERON:0000200!1.43e-09!6;UBERON:0002050!2.48e-09!605;UBERON:0005423!2.48e-09!605;UBERON:0000468!3.70e-09!659;UBERON:0000467!6.02e-09!625;UBERON:0000923!6.11e-09!604;UBERON:0005291!6.11e-09!604;UBERON:0006598!6.11e-09!604;UBERON:0002532!6.11e-09!604;UBERON:0000480!7.02e-09!626;UBERON:0001872!1.15e-08!5;UBERON:0002021!2.16e-08!5;UBERON:0000349!2.59e-08!5;UBERON:0004733!7.80e-08!12;UBERON:0002028!7.80e-08!12;UBERON:0007277!7.80e-08!12;UBERON:0002298!1.40e-07!8;UBERON:0000369!1.86e-07!4;UBERON:0002435!1.86e-07!4;UBERON:0000204!1.86e-07!4;UBERON:0010082!1.86e-07!4;UBERON:0000483!2.72e-07!309;UBERON:0004732!4.36e-07!13;UBERON:0000119!4.66e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.50e-55;32!UBERON:0002619;3.29e-52;22!UBERON:0002791;4.64e-52;32!UBERON:0001893;2.28e-50;34!UBERON:0000956;6.92e-50;25!UBERON:0000203;6.92e-50;25!UBERON:0003528;3.09e-48;34!UBERON:0002020;3.09e-48;34!UBERON:0001950;2.01e-47;20!UBERON:0002780;2.87e-36;41!UBERON:0001890;2.87e-36;41!UBERON:0000073;6.43e-28;53!UBERON:0002616;6.43e-28;53!UBERON:0000955;2.32e-23;68!UBERON:0001017;9.95e-23;75!UBERON:0001016;1.36e-16;83!UBERON:0000200;1.16e-15;6!UBERON:0002420;4.03e-14;9!UBERON:0007245;4.03e-14;9!UBERON:0010009;4.03e-14;9!UBERON:0010011;4.03e-14;9!UBERON:0000454;4.03e-14;9!UBERON:0001872;4.63e-14;5!UBERON:0001871;1.46e-13;6!UBERON:0002021;1.47e-13;5!UBERON:0000349;2.50e-13;5!UBERON:0000369;7.62e-12;4!UBERON:0002435;7.62e-12;4!UBERON:0000204;7.62e-12;4!UBERON:0007023;6.03e-11;114!UBERON:0009663;8.34e-10;7!UBERON:0005383;1.66e-09;3!UBERON:0005382;1.66e-09;3!UBERON:0011216;6.55e-09;132!UBERON:0001870;7.74e-09;3!UBERON:0006947;3.70e-08;3!UBERON:0004054;3.70e-08;3!UBERON:0000125;1.56e-07;9!UBERON:0002308;1.56e-07;9!UBERON:0001873;9.08e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.12e-62,32;UBERON:0001893,2.41e-58,34;UBERON:0002791,5.18e-58,32;UBERON:0001017,2.44e-55,81;UBERON:0003528,3.18e-54,34;UBERON:0002020,3.18e-54,34;UBERON:0002619,3.41e-52,22;UBERON:0001016,3.26e-51,89;UBERON:0002780,7.35e-51,41;UBERON:0001890,7.35e-51,41;UBERON:0003080,7.35e-51,41;UBERON:0006240,7.35e-51,41;UBERON:0000956,9.27e-50,25;UBERON:0000203,9.27e-50,25;UBERON:0000073,1.95e-49,53;UBERON:0002616,1.95e-49,53;UBERON:0001049,3.71e-49,56;UBERON:0005068,3.71e-49,56;UBERON:0006241,3.71e-49,56;UBERON:0007135,3.71e-49,56;UBERON:0001950,2.11e-47,20;UBERON:0000955,3.07e-46,68;UBERON:0006238,3.07e-46,68;UBERON:0007023,2.11e-35,114;UBERON:0003075,1.37e-32,82;UBERON:0007284,1.37e-32,82;UBERON:0003056,1.20e-31,61;UBERON:0004121,8.63e-31,171;UBERON:0000924,8.63e-31,171;UBERON:0006601,8.63e-31,171;UBERON:0002346,1.25e-30,86;UBERON:0010371,3.58e-27,104;UBERON:0011216,5.45e-25,223;UBERON:0010314,6.18e-22,132;UBERON:0000200,1.41e-15,6;UBERON:0002420,2.86e-14,9;UBERON:0007245,2.86e-14,9;UBERON:0010009,2.86e-14,9;UBERON:0010011,2.86e-14,9;UBERON:0000454,2.86e-14,9;UBERON:0001872,5.40e-14,5;UBERON:0001871,1.31e-13,6;UBERON:0002021,1.62e-13,5;UBERON:0000349,2.23e-13,5;UBERON:0000369,6.95e-12,4;UBERON:0002435,6.95e-12,4;UBERON:0000204,6.95e-12,4;UBERON:0010082,6.95e-12,4;UBERON:0004111,8.97e-12,240;UBERON:0000025,3.89e-10,192;UBERON:0009663,6.55e-10,7;UBERON:0005383,1.51e-09,3;UBERON:0005382,1.51e-09,3;UBERON:0001870,6.17e-09,3;UBERON:0006947,2.86e-08,3;UBERON:0004054,2.86e-08,3;UBERON:0000922,1.11e-07,592;UBERON:0000125,1.30e-07,9;UBERON:0002308,1.30e-07,9;UBERON:0005423,1.62e-07,581;UBERON:0000923,2.64e-07,560;UBERON:0010316,2.64e-07,560;UBERON:0005291,2.64e-07,560;UBERON:0006598,2.64e-07,560;UBERON:0010317,2.64e-07,560;UBERON:0002532,2.64e-07,560;UBERON:0002050,3.83e-07,564;UBERON:0001873,8.13e-07,2;UBERON:0010122,8.13e-07,2 | |||
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|short_description=p3@MPPED2 | |||
}} | }} |
Latest revision as of 14:00, 17 September 2015
Short description: | p3@MPPED2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MPPED2_5end |
Coexpression cluster: | C3138_parietal_merkel_thyroid_occipital_temporal_transitionalcell_pharyngeal |
Association with transcript: | -318bp_to_NM_001145399, uc001msq.3_5end |
EntrezGene: | MPPED2 |
HGNC: | 1180 |
UniProt: | E9PB10Q59GE6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.37e-09 | 8 |
neural cell | 6.27e-07 | 25 |
Merkel cell | 7.47e-07 | 2 |