FFCP PHASE1:Hg19::chr12:131201033..131201041,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:131201033..131201041,- to FFCP PHASE1:Hg19::chr12:131201033..131201041,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23504 | |EntrezGene=23504 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30339 | |HGNC=30339 | ||
|TSSclassifier=strong | |||
|UniProt=O15034 | |UniProt=O15034 | ||
|association_with_transcript=-207bp_to_ENST00000536002,ENST00000544034,uc001uim.2_5end | |||
|cluster_id=chr12:131201033..131201041,- | |||
|coexpression_cluster_id=C271 | |||
|description=CAGE_peak_3_at_RIMBP2_5end | |||
|id=chr12:131201033..131201041,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.59e-13;82 | |||
|ontology_enrichment_disease=DOID:171!2.44e-11!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.45e-77!57;UBERON:0005068!7.45e-77!57;UBERON:0006241!7.45e-77!57;UBERON:0007135!7.45e-77!57;UBERON:0001017!3.87e-72!82;UBERON:0000073!2.78e-71!94;UBERON:0001016!2.78e-71!94;UBERON:0005743!4.76e-71!86;UBERON:0000955!1.39e-70!69;UBERON:0006238!1.39e-70!69;UBERON:0002616!2.05e-70!59;UBERON:0002780!1.62e-68!41;UBERON:0001890!1.62e-68!41;UBERON:0006240!1.62e-68!41;UBERON:0003080!1.10e-66!42;UBERON:0002346!5.56e-62!90;UBERON:0003075!4.69e-57!86;UBERON:0007284!4.69e-57!86;UBERON:0002020!2.70e-55!34;UBERON:0003528!2.70e-55!34;UBERON:0001893!3.34e-55!34;UBERON:0002791!7.40e-53!33;UBERON:0001869!4.82e-51!32;UBERON:0003056!1.84e-48!61;UBERON:0002619!4.48e-45!22;UBERON:0000153!2.49e-41!129;UBERON:0007811!2.49e-41!129;UBERON:0000033!3.19e-40!123;UBERON:0007023!6.32e-40!115;UBERON:0001950!8.21e-40!20;UBERON:0000956!3.56e-39!25;UBERON:0000203!3.56e-39!25;UBERON:0000924!1.79e-37!173;UBERON:0006601!1.79e-37!173;UBERON:0004121!7.17e-34!169;UBERON:0000025!2.15e-18!194;UBERON:0002420!4.09e-18!9;UBERON:0007245!4.09e-18!9;UBERON:0010009!4.09e-18!9;UBERON:0010011!4.09e-18!9;UBERON:0000454!4.09e-18!9;UBERON:0002308!2.42e-17!9;UBERON:0000125!2.42e-17!9;UBERON:0001871!4.61e-17!7;UBERON:0000349!9.33e-15!5;UBERON:0002298!9.38e-15!8;UBERON:0001872!1.90e-14!5;UBERON:0001894!2.06e-14!7;UBERON:0006222!2.06e-14!7;UBERON:0009663!5.28e-13!7;UBERON:0004111!1.74e-12!241;UBERON:0003296!1.83e-12!4;UBERON:0010133!1.83e-12!4;UBERON:0004733!2.01e-12!12;UBERON:0002028!2.01e-12!12;UBERON:0007277!2.01e-12!12;UBERON:0003076!4.10e-12!15;UBERON:0003057!4.10e-12!15;UBERON:0000200!1.19e-11!6;UBERON:0000477!1.87e-11!286;UBERON:0004732!2.34e-11!13;UBERON:0000483!7.25e-11!309;UBERON:0000119!1.22e-10!312;UBERON:0000064!1.89e-10!219;UBERON:0000475!2.10e-10!365;UBERON:0002771!2.49e-09!3;UBERON:0002021!4.01e-09!5;UBERON:0000988!2.57e-08!3;UBERON:0001896!3.00e-08!3;UBERON:0005290!3.00e-08!3;UBERON:0010096!3.00e-08!3;UBERON:0006331!3.16e-08!3;UBERON:0001905!3.68e-07!2;UBERON:0002757!3.68e-07!2;UBERON:0010134!3.68e-07!2;UBERON:0002784!3.68e-07!2;UBERON:0005408!3.68e-07!2;UBERON:0001899!3.68e-07!2;UBERON:0001954!5.33e-07!2;UBERON:0003022!5.33e-07!2;UBERON:0002421!5.33e-07!2;UBERON:0002600!5.33e-07!2;UBERON:0001876!5.48e-07!2;UBERON:0000007!5.80e-07!2;UBERON:0002680!6.02e-07!9;UBERON:0001895!6.02e-07!9;UBERON:0010092!6.02e-07!9;UBERON:0000369!9.27e-07!4;UBERON:0002435!9.27e-07!4;UBERON:0000204!9.27e-07!4;UBERON:0010082!9.27e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.08e-78;22!UBERON:0000956;4.38e-69;25!UBERON:0000203;4.38e-69;25!UBERON:0001950;2.50e-64;20!UBERON:0002791;1.73e-53;32!UBERON:0003528;1.94e-53;34!UBERON:0002020;1.94e-53;34!UBERON:0001869;2.25e-53;32!UBERON:0002780;1.13e-50;41!UBERON:0001890;1.13e-50;41!UBERON:0001893;1.33e-48;34!UBERON:0001871;3.86e-42;6!UBERON:0000073;3.95e-41;53!UBERON:0002616;3.95e-41;53!UBERON:0003296;1.69e-34;4!UBERON:0010133;1.69e-34;4!UBERON:0000955;1.02e-27;68!UBERON:0000349;2.95e-27;5!UBERON:0001894;7.60e-20;7!UBERON:0001017;1.11e-19;75!UBERON:0001016;6.76e-19;83!UBERON:0001905;1.58e-18;2!UBERON:0002757;1.58e-18;2!UBERON:0010134;1.58e-18;2!UBERON:0005408;1.58e-18;2!UBERON:0001899;1.58e-18;2!UBERON:0001876;6.25e-18;2!UBERON:0001954;7.09e-18;2!UBERON:0003022;7.09e-18;2!UBERON:0002421;7.09e-18;2!UBERON:0002600;7.09e-18;2!UBERON:0000007;8.41e-18;2!UBERON:0002771;1.87e-17;2!UBERON:0001872;7.03e-16;5!UBERON:0000200;5.98e-13;6!UBERON:0001870;5.88e-12;3!UBERON:0002784;1.01e-09;4!UBERON:0002022;1.36e-09;1!UBERON:0001874;1.36e-09;1!UBERON:0003112;1.36e-09;1!UBERON:0011158;1.36e-09;1!UBERON:0003128;1.36e-09;1!UBERON:0001703;1.36e-09;1!UBERON:0002241;1.36e-09;1!UBERON:0011216;3.66e-09;132!UBERON:0002420;5.82e-09;9!UBERON:0007245;5.82e-09;9!UBERON:0010009;5.82e-09;9!UBERON:0010011;5.82e-09;9!UBERON:0000454;5.82e-09;9!UBERON:0010314;3.14e-08;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.56e-78,22;UBERON:0002780,6.71e-76,41;UBERON:0001890,6.71e-76,41;UBERON:0003080,6.71e-76,41;UBERON:0006240,6.71e-76,41;UBERON:0000073,6.02e-71,53;UBERON:0002616,6.02e-71,53;UBERON:0000956,7.04e-69,25;UBERON:0000203,7.04e-69,25;UBERON:0001049,4.79e-67,56;UBERON:0005068,4.79e-67,56;UBERON:0006241,4.79e-67,56;UBERON:0007135,4.79e-67,56;UBERON:0001950,5.24e-64,20;UBERON:0002791,3.07e-61,32;UBERON:0001869,3.07e-61,32;UBERON:0000955,2.39e-59,68;UBERON:0006238,2.39e-59,68;UBERON:0003528,1.36e-57,34;UBERON:0002020,1.36e-57,34;UBERON:0001893,1.36e-57,34;UBERON:0003056,2.00e-50,61;UBERON:0001017,1.53e-49,81;UBERON:0003075,4.93e-45,82;UBERON:0007284,4.93e-45,82;UBERON:0001016,2.25e-44,89;UBERON:0002346,8.21e-43,86;UBERON:0001871,4.19e-42,6;UBERON:0010371,6.61e-35,104;UBERON:0003296,1.26e-34,4;UBERON:0010133,1.26e-34,4;UBERON:0010314,1.21e-29,132;UBERON:0000349,1.91e-27,5;UBERON:0007023,2.96e-23,114;UBERON:0004121,7.42e-22,171;UBERON:0000924,7.42e-22,171;UBERON:0006601,7.42e-22,171;UBERON:0001894,6.44e-20,7;UBERON:0006222,6.44e-20,7;UBERON:0001905,1.59e-18,2;UBERON:0002757,1.59e-18,2;UBERON:0010134,1.59e-18,2;UBERON:0005408,1.59e-18,2;UBERON:0001899,1.59e-18,2;UBERON:0001954,4.85e-18,2;UBERON:0003022,4.85e-18,2;UBERON:0002421,4.85e-18,2;UBERON:0002600,4.85e-18,2;UBERON:0001876,5.28e-18,2;UBERON:0000007,6.27e-18,2;UBERON:0011216,1.18e-17,223;UBERON:0002771,1.46e-17,2;UBERON:0000025,1.99e-17,192;UBERON:0001872,5.76e-16,5;UBERON:0004111,3.01e-13,240;UBERON:0000200,7.36e-13,6;UBERON:0001870,1.35e-11,3;UBERON:0003112,8.17e-10,1;UBERON:0011158,8.17e-10,1;UBERON:0003128,8.17e-10,1;UBERON:0001703,8.17e-10,1;UBERON:0002241,8.17e-10,1;UBERON:0004761,8.17e-10,1;UBERON:0009617,8.17e-10,1;UBERON:0002784,1.01e-09,4;UBERON:0000483,1.29e-09,306;UBERON:0002022,1.36e-09,1;UBERON:0000119,1.74e-09,309;UBERON:0001874,1.76e-09,1;UBERON:0002420,5.99e-09,9;UBERON:0007245,5.99e-09,9;UBERON:0010009,5.99e-09,9;UBERON:0010011,5.99e-09,9;UBERON:0000454,5.99e-09,9 | |||
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|short_description=p3@RIMBP2 | |||
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Latest revision as of 08:59, 17 September 2015
Short description: | p3@RIMBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RIMBP2_5end |
Coexpression cluster: | C271_pineal_spinal_locus_globus_medulla_thalamus_cerebellum |
Association with transcript: | -207bp_to_ENST00000536002, ENST00000544034, uc001uim.2_5end |
EntrezGene: | RIMBP2 |
HGNC: | 30339 |
UniProt: | O15034 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data