FFCP PHASE1:Hg19::chr14:21994337..21994442,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:21994337..21994442,- to FFCP PHASE1:Hg19::chr14:21994337..21994442,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6297 | |EntrezGene=6297 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10526 | |HGNC=10526 | ||
|TSSclassifier=strong | |||
|UniProt=E7EW59,F5H433 | |UniProt=E7EW59,F5H433 | ||
|association_with_transcript=0bp_to_ENST00000450879,ENST00000537235,uc001wbf.3,uc010tly.1,uc010tlz.1_5end | |||
|cluster_id=chr14:21994337..21994442,- | |||
|coexpression_cluster_id=C3408 | |||
|description=CAGE_peak_1_at_SALL2_5end | |||
|id=chr14:21994337..21994442,- | |||
|ontology_enrichment_celltype=CL:0000133!3.18e-09!59;CL:0002319!2.32e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.39e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,3.22e-08,59;CL:0002319,1.34e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.27e-08;82 | |||
|ontology_enrichment_disease=DOID:3095!4.55e-07!22;DOID:2994!4.55e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.82e-07;22!DOID:2994;3.82e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.89e-07,22;DOID:2994,3.89e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.92e-41!94;UBERON:0001016!5.92e-41!94;UBERON:0005743!2.05e-40!86;UBERON:0001017!6.04e-39!82;UBERON:0002346!6.16e-35!90;UBERON:0003075!6.28e-33!86;UBERON:0007284!6.28e-33!86;UBERON:0000955!4.88e-32!69;UBERON:0006238!4.88e-32!69;UBERON:0001049!1.78e-31!57;UBERON:0005068!1.78e-31!57;UBERON:0006241!1.78e-31!57;UBERON:0007135!1.78e-31!57;UBERON:0000924!1.74e-30!173;UBERON:0006601!1.74e-30!173;UBERON:0002616!2.46e-30!59;UBERON:0004121!1.18e-28!169;UBERON:0000033!6.59e-26!123;UBERON:0000153!9.84e-26!129;UBERON:0007811!9.84e-26!129;UBERON:0003056!4.52e-25!61;UBERON:0007023!1.19e-23!115;UBERON:0003080!2.06e-22!42;UBERON:0000481!2.09e-22!347;UBERON:0002780!2.35e-22!41;UBERON:0001890!2.35e-22!41;UBERON:0006240!2.35e-22!41;UBERON:0000119!9.31e-22!312;UBERON:0000483!5.11e-21!309;UBERON:0000475!2.35e-20!365;UBERON:0002020!7.66e-19!34;UBERON:0003528!7.66e-19!34;UBERON:0001893!1.18e-18!34;UBERON:0002791!3.42e-18!33;UBERON:0001869!1.05e-17!32;UBERON:0000025!1.13e-15!194;UBERON:0000477!6.50e-15!286;UBERON:0004111!1.48e-14!241;UBERON:0000956!8.26e-14!25;UBERON:0000203!8.26e-14!25;UBERON:0002619!8.75e-13!22;UBERON:0001950!6.90e-12!20;UBERON:0000922!1.09e-11!612;UBERON:0003076!3.61e-10!15;UBERON:0003057!3.61e-10!15;UBERON:0000064!7.46e-10!219;UBERON:0002050!2.74e-09!605;UBERON:0005423!2.74e-09!605;UBERON:0000468!3.46e-09!659;UBERON:0000923!5.02e-09!604;UBERON:0005291!5.02e-09!604;UBERON:0006598!5.02e-09!604;UBERON:0002532!5.02e-09!604;UBERON:0004732!9.03e-09!13;UBERON:0004733!1.92e-08!12;UBERON:0002028!1.92e-08!12;UBERON:0007277!1.92e-08!12;UBERON:0003103!4.89e-07!69;UBERON:0002680!6.32e-07!9;UBERON:0001895!6.32e-07!9;UBERON:0010092!6.32e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;7.84e-18;53!UBERON:0002616;7.84e-18;53!UBERON:0002780;2.77e-17;41!UBERON:0001890;2.77e-17;41!UBERON:0003528;3.79e-17;34!UBERON:0002020;3.79e-17;34!UBERON:0001869;4.60e-17;32!UBERON:0002791;4.69e-17;32!UBERON:0001893;4.79e-17;34!UBERON:0001017;1.02e-15;75!UBERON:0000955;6.42e-15;68!UBERON:0000956;1.37e-14;25!UBERON:0000203;1.37e-14;25!UBERON:0001016;1.98e-14;83!UBERON:0002619;1.66e-13;22!UBERON:0001950;1.54e-12;20!UBERON:0000922;2.66e-09;49!UBERON:0004732;3.04e-09;13!UBERON:0004733;6.60e-09;12!UBERON:0002028;6.60e-09;12!UBERON:0011216;1.13e-08;132!UBERON:0002680;2.66e-07;9!UBERON:0001895;2.66e-07;9!UBERON:0000125;7.72e-07;9!UBERON:0002308;7.72e-07;9!UBERON:0007023;8.53e-07;114 | |||
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| ||
|short_description=p1@SALL2 | |||
}} | }} |
Latest revision as of 03:13, 19 September 2015
Short description: | p1@SALL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SALL2_5end |
Coexpression cluster: | C3408_cerebellum_pineal_rhabdomyosarcoma_neuroectodermal_brain_Pericytes_iPS |
Association with transcript: | 0bp_to_ENST00000450879, ENST00000537235, uc001wbf.3, uc010tly.1, uc010tlz.1_5end |
EntrezGene: | SALL2 |
HGNC: | 10526 |
UniProt: | E7EW59F5H433 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 3.22e-08 | 59 |
neural cell | 1.34e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.89e-07 | 22 |
germ cell cancer | 3.89e-07 | 22 |