FFCP PHASE1:Hg19::chr17:79358943..79358954,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:79358943..79358954,- to FFCP PHASE1:Hg19::chr17:79358943..79358954,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:79358943..79358954,- | |||
|coexpression_cluster_id=C327 | |||
|description=CAGE_peak_at_chr17:79358943..79358954,- | |||
|id=chr17:79358943..79358954,- | |||
|ontology_enrichment_celltype=CL:0000148!1.83e-22!10;CL:0000541!1.83e-22!10;CL:0000147!1.98e-19!14;CL:0002567!7.57e-12!3;CL:0000710!1.67e-10!20;CL:0000075!2.05e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.18e-21;10!CL:0000147;3.55e-15;14!CL:0002567;3.52e-14;3!CL:0000710;2.59e-10;20!CL:0000075;2.25e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.06e-21,10;CL:0000541,1.06e-21,10;CL:0000147,3.30e-15,14;CL:0002567,3.02e-14,3;CL:0000710,2.46e-10,20;CL:0000075,2.17e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.69e-16;82!UBERON:0010122;2.01e-09;2 | |||
|ontology_enrichment_disease=DOID:1909!3.54e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.00e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.01e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.36e-73!57;UBERON:0005068!1.36e-73!57;UBERON:0006241!1.36e-73!57;UBERON:0007135!1.36e-73!57;UBERON:0005743!5.69e-63!86;UBERON:0002616!8.89e-63!59;UBERON:0001017!8.13e-60!82;UBERON:0000073!4.33e-59!94;UBERON:0001016!4.33e-59!94;UBERON:0002780!1.10e-58!41;UBERON:0001890!1.10e-58!41;UBERON:0006240!1.10e-58!41;UBERON:0000955!2.59e-58!69;UBERON:0006238!2.59e-58!69;UBERON:0003080!3.80e-57!42;UBERON:0001893!1.45e-56!34;UBERON:0002020!1.76e-56!34;UBERON:0003528!1.76e-56!34;UBERON:0003075!1.68e-54!86;UBERON:0007284!1.68e-54!86;UBERON:0002791!1.06e-53!33;UBERON:0002346!1.14e-51!90;UBERON:0001869!2.87e-50!32;UBERON:0007023!4.53e-46!115;UBERON:0003056!2.10e-43!61;UBERON:0002619!4.18e-35!22;UBERON:0000033!4.23e-35!123;UBERON:0000153!4.84e-33!129;UBERON:0007811!4.84e-33!129;UBERON:0004121!3.27e-32!169;UBERON:0000924!3.10e-31!173;UBERON:0006601!3.10e-31!173;UBERON:0000956!1.38e-30!25;UBERON:0000203!1.38e-30!25;UBERON:0002308!1.50e-30!9;UBERON:0000125!1.50e-30!9;UBERON:0001950!2.04e-29!20;UBERON:0002420!2.37e-24!9;UBERON:0007245!2.37e-24!9;UBERON:0010009!2.37e-24!9;UBERON:0010011!2.37e-24!9;UBERON:0000454!2.37e-24!9;UBERON:0009663!2.91e-24!7;UBERON:0003076!7.71e-17!15;UBERON:0003057!7.71e-17!15;UBERON:0000025!1.75e-16!194;UBERON:0004732!2.03e-15!13;UBERON:0002298!2.16e-15!8;UBERON:0000200!2.06e-14!6;UBERON:0000369!4.77e-14!4;UBERON:0002435!4.77e-14!4;UBERON:0000204!4.77e-14!4;UBERON:0010082!4.77e-14!4;UBERON:0004733!5.73e-13!12;UBERON:0002028!5.73e-13!12;UBERON:0007277!5.73e-13!12;UBERON:0000349!1.27e-11!5;UBERON:0004111!1.59e-11!241;UBERON:0006331!1.72e-11!3;UBERON:0002771!1.98e-11!3;UBERON:0001872!2.89e-11!5;UBERON:0001871!4.17e-11!7;UBERON:0000988!6.68e-11!3;UBERON:0005383!6.68e-11!3;UBERON:0005382!6.68e-11!3;UBERON:0000483!1.27e-10!309;UBERON:0000119!2.00e-10!312;UBERON:0000064!7.64e-10!219;UBERON:0000477!4.19e-09!286;UBERON:0002680!4.38e-09!9;UBERON:0001895!4.38e-09!9;UBERON:0010092!4.38e-09!9;UBERON:0000475!7.74e-09!365;UBERON:0001875!1.79e-08!2;UBERON:0006514!1.79e-08!2;UBERON:0001897!4.37e-08!2;UBERON:0005162!4.69e-08!2;UBERON:0000122!4.69e-08!2;UBERON:0001954!4.86e-08!2;UBERON:0003022!4.86e-08!2;UBERON:0002421!4.86e-08!2;UBERON:0002600!4.86e-08!2;UBERON:0002148!5.40e-08!2;UBERON:0009662!5.40e-08!2;UBERON:0001873!5.59e-08!2;UBERON:0010122!5.59e-08!2;UBERON:0002021!9.96e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.61e-59;34!UBERON:0003528;1.16e-57;34!UBERON:0002020;1.16e-57;34!UBERON:0002791;7.24e-55;32!UBERON:0001869;1.43e-54;32!UBERON:0002780;5.80e-49;41!UBERON:0001890;5.80e-49;41!UBERON:0002619;1.31e-43;22!UBERON:0000073;6.10e-41;53!UBERON:0002616;6.10e-41;53!UBERON:0000956;3.81e-38;25!UBERON:0000203;3.81e-38;25!UBERON:0000125;2.80e-37;9!UBERON:0002308;2.80e-37;9!UBERON:0001950;1.58e-36;20!UBERON:0002420;1.09e-29;9!UBERON:0007245;1.09e-29;9!UBERON:0010009;1.09e-29;9!UBERON:0010011;1.09e-29;9!UBERON:0000454;1.09e-29;9!UBERON:0009663;1.81e-29;7!UBERON:0000955;1.34e-24;68!UBERON:0001017;1.22e-23;75!UBERON:0001016;3.07e-18;83!UBERON:0000200;1.38e-17;6!UBERON:0002298;1.99e-17;6!UBERON:0000369;7.18e-17;4!UBERON:0002435;7.18e-17;4!UBERON:0000204;7.18e-17;4!UBERON:0000349;6.02e-14;5!UBERON:0001872;1.57e-13;5!UBERON:0000988;2.90e-13;3!UBERON:0007023;3.69e-13;114!UBERON:0005383;3.74e-13;3!UBERON:0005382;3.74e-13;3!UBERON:0004732;4.44e-11;13!UBERON:0001871;3.71e-10;6!UBERON:0001875;4.33e-10;2!UBERON:0006514;4.33e-10;2!UBERON:0005162;1.14e-09;2!UBERON:0000122;1.14e-09;2!UBERON:0002771;1.28e-09;2!UBERON:0001954;1.39e-09;2!UBERON:0003022;1.39e-09;2!UBERON:0002421;1.39e-09;2!UBERON:0002600;1.39e-09;2!UBERON:0002148;1.55e-09;2!UBERON:0006331;1.55e-09;2!UBERON:0009662;1.55e-09;2!UBERON:0001873;2.01e-09;2!UBERON:0004733;1.37e-08;12!UBERON:0002028;1.37e-08;12!UBERON:0011216;2.14e-08;132!UBERON:0002021;3.20e-08;5!UBERON:0010314;5.34e-07;132!UBERON:0001870;8.50e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.55e-79,56;UBERON:0005068,4.55e-79,56;UBERON:0006241,4.55e-79,56;UBERON:0007135,4.55e-79,56;UBERON:0000073,8.76e-74,53;UBERON:0002616,8.76e-74,53;UBERON:0001893,2.50e-70,34;UBERON:0003528,3.20e-70,34;UBERON:0002020,3.20e-70,34;UBERON:0002780,4.83e-68,41;UBERON:0001890,4.83e-68,41;UBERON:0003080,4.83e-68,41;UBERON:0006240,4.83e-68,41;UBERON:0002791,6.51e-63,32;UBERON:0001869,1.64e-62,32;UBERON:0000955,4.07e-59,68;UBERON:0006238,4.07e-59,68;UBERON:0003075,7.60e-59,82;UBERON:0007284,7.60e-59,82;UBERON:0002346,8.93e-56,86;UBERON:0001017,2.23e-55,81;UBERON:0001016,2.86e-52,89;UBERON:0003056,2.41e-51,61;UBERON:0010371,1.01e-50,104;UBERON:0002619,1.61e-43,22;UBERON:0007023,2.11e-43,114;UBERON:0000956,4.59e-38,25;UBERON:0000203,4.59e-38,25;UBERON:0000125,2.37e-37,9;UBERON:0002308,2.37e-37,9;UBERON:0001950,1.85e-36,20;UBERON:0010314,4.69e-36,132;UBERON:0002420,8.68e-30,9;UBERON:0007245,8.68e-30,9;UBERON:0010009,8.68e-30,9;UBERON:0010011,8.68e-30,9;UBERON:0000454,8.68e-30,9;UBERON:0009663,1.41e-29,7;UBERON:0004121,3.57e-29,171;UBERON:0000924,3.57e-29,171;UBERON:0006601,3.57e-29,171;UBERON:0000025,5.97e-18,192;UBERON:0011216,9.56e-18,223;UBERON:0000200,1.68e-17,6;UBERON:0002298,2.00e-17,6;UBERON:0000369,5.82e-17,4;UBERON:0002435,5.82e-17,4;UBERON:0000204,5.82e-17,4;UBERON:0010082,5.82e-17,4;UBERON:0000349,4.68e-14,5;UBERON:0001872,1.29e-13,5;UBERON:0000988,4.44e-13,3;UBERON:0005383,4.44e-13,3;UBERON:0005382,4.44e-13,3;UBERON:0003076,6.77e-13,15;UBERON:0003057,6.77e-13,15;UBERON:0004111,7.31e-13,240;UBERON:0000483,6.30e-12,306;UBERON:0000119,9.87e-12,309;UBERON:0004732,4.79e-11,13;UBERON:0001871,3.50e-10,6;UBERON:0001875,4.34e-10,2;UBERON:0006514,4.34e-10,2;UBERON:0002771,1.20e-09,2;UBERON:0005162,1.42e-09,2;UBERON:0000122,1.42e-09,2;UBERON:0001954,1.49e-09,2;UBERON:0003022,1.49e-09,2;UBERON:0002421,1.49e-09,2;UBERON:0002600,1.49e-09,2;UBERON:0002148,1.69e-09,2;UBERON:0006331,1.69e-09,2;UBERON:0009662,1.69e-09,2;UBERON:0001873,1.77e-09,2;UBERON:0010122,1.77e-09,2;UBERON:0004733,1.37e-08,12;UBERON:0002028,1.37e-08,12;UBERON:0007277,1.37e-08,12;UBERON:0002021,4.54e-08,5;UBERON:0001870,9.55e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96880206346389,8.40374536228211,15.2382681373061,1.71072446022705,7.50640696734262,8.10926256178577,22.8661146104463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23539657744179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,0.649376687132959,0,0,0,0,0,0,0,0,0,0,1.77148277162768,2.17073589525734,0,0.663475559587348,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.470508766145,0,2.10838001152805,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,2.15256706249988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,11.7738625847114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,1.59045937961861,4.08610218334727,0,0,0,0,0,1.76173714308272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55139547633861,3.43804764530994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70836770862748,3.004582336956,0,2.5513681853476,1.98708489412427,0,0,1.66814029295813,7.13663333862419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.25382057376577,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99110597799025,0,6.5449882213432,1.02558182120378,0,1.38314504928436,6.62050147090589,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62090203084147,2.34323429584154,1.86018116851066,1.77564268542939,0,0,0,0,0,0,0,0,0,0,0,0,1.08751572762931,1.31545547125698,0,0,0,1.09980912941201,0,0,0,0,4.93188154818929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57046773691956,2.97046400327086,0,0,0,0,0,0,0,0,0,0,7.88367707332982,0,2.51568513706384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,10.4467325820514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96880206346389,8.40374536228211,15.2382681373061,1.71072446022705,7.50640696734262,8.10926256178577,22.8661146104463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23539657744179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,0.649376687132959,0,0,0,0,0,0,0,0,0,0,1.77148277162768,2.17073589525734,0,0.663475559587348,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.470508766145,0,2.10838001152805,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,2.15256706249988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,11.7738625847114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,1.59045937961861,4.08610218334727,0,0,0,0,0,1.76173714308272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55139547633861,3.43804764530994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70836770862748,3.004582336956,0,2.5513681853476,1.98708489412427,0,0,1.66814029295813,7.13663333862419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.25382057376577,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99110597799025,0,6.5449882213432,1.02558182120378,0,1.38314504928436,6.62050147090589,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62090203084147,2.34323429584154,1.86018116851066,1.77564268542939,0,0,0,0,0,0,0,0,0,0,0,0,1.08751572762931,1.31545547125698,0,0,0,1.09980912941201,0,0,0,0,4.93188154818929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57046773691956,2.97046400327086,0,0,0,0,0,0,0,0,0,0,7.88367707332982,0,2.51568513706384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,10.4467325820514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:79358943..79358954,- | |||
}} | }} |
Latest revision as of 22:39, 25 July 2015
Short description: | p@chr17:79358943..79358954, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:79358943..79358954, - |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.06e-21 | 10 |
melanoblast | 1.06e-21 | 10 |
pigment cell | 3.30e-15 | 14 |
light melanocyte | 3.02e-14 | 3 |
neurecto-epithelial cell | 2.46e-10 | 20 |
columnar/cuboidal epithelial cell | 2.17e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.01e-09 | 2 |