FFCP PHASE1:Hg19::chr1:202679624..202679645,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:202679624..202679645,- to FFCP PHASE1:Hg19::chr1:202679624..202679645,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=127833 | |EntrezGene=127833 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11510 | |HGNC=11510 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N9I0 | |UniProt=Q8N9I0 | ||
|association_with_transcript=-73bp_to_NM_177402,uc009xaf.2,uc010pqb.1_5end | |||
|cluster_id=chr1:202679624..202679645,- | |||
|coexpression_cluster_id=C247 | |||
|description=CAGE_peak_3_at_SYT2_5end | |||
|id=chr1:202679624..202679645,- | |||
|ontology_enrichment_celltype=CL:0002322!3.56e-12!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.61e-20;5!CL:0000039;2.94e-09;7!CL:0000586;2.94e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.78e-20,5;CL:0000039,3.33e-09,7;CL:0000586,3.33e-09,7 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.54e-14;3!UBERON:0006601;3.62e-10;82!UBERON:0009117;1.05e-09;10!UBERON:0005564;1.05e-09;10!UBERON:0006241;7.89e-07;3!UBERON:0003057;7.89e-07;3 | |||
|ontology_enrichment_disease=DOID:3095!2.09e-08!22;DOID:2994!2.09e-08!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.77e-53!57;UBERON:0005068!1.77e-53!57;UBERON:0006241!1.77e-53!57;UBERON:0007135!1.77e-53!57;UBERON:0000073!4.49e-51!94;UBERON:0001016!4.49e-51!94;UBERON:0001017!9.33e-49!82;UBERON:0005743!3.67e-48!86;UBERON:0002616!1.05e-42!59;UBERON:0000955!3.11e-41!69;UBERON:0006238!3.11e-41!69;UBERON:0007023!3.38e-38!115;UBERON:0003075!1.42e-35!86;UBERON:0007284!1.42e-35!86;UBERON:0002346!1.78e-33!90;UBERON:0002780!2.88e-31!41;UBERON:0001890!2.88e-31!41;UBERON:0006240!2.88e-31!41;UBERON:0003080!2.34e-30!42;UBERON:0002020!2.03e-27!34;UBERON:0003528!2.03e-27!34;UBERON:0001893!6.33e-27!34;UBERON:0001869!2.14e-26!32;UBERON:0003076!6.80e-26!15;UBERON:0003057!6.80e-26!15;UBERON:0002791!4.50e-25!33;UBERON:0004121!1.19e-23!169;UBERON:0000924!8.64e-23!173;UBERON:0006601!8.64e-23!173;UBERON:0001950!1.08e-22!20;UBERON:0004732!1.38e-21!13;UBERON:0003056!2.24e-20!61;UBERON:0002619!2.35e-20!22;UBERON:0000033!1.02e-19!123;UBERON:0004733!1.39e-19!12;UBERON:0002028!1.39e-19!12;UBERON:0007277!1.39e-19!12;UBERON:0000153!2.14e-19!129;UBERON:0007811!2.14e-19!129;UBERON:0000956!1.58e-17!25;UBERON:0000203!1.58e-17!25;UBERON:0000200!4.26e-14!6;UBERON:0002680!2.46e-13!9;UBERON:0001895!2.46e-13!9;UBERON:0010092!2.46e-13!9;UBERON:0003135!4.62e-12!11;UBERON:0000025!6.79e-12!194;UBERON:0002308!7.72e-12!9;UBERON:0000125!7.72e-12!9;UBERON:0002298!3.16e-11!8;UBERON:0000473!4.65e-10!8;UBERON:0004111!3.47e-09!241;UBERON:0000988!8.36e-09!3;UBERON:0002021!8.98e-09!5;UBERON:0001872!2.81e-08!5;UBERON:0001896!3.63e-08!3;UBERON:0005290!3.63e-08!3;UBERON:0010096!3.63e-08!3;UBERON:0002240!4.18e-08!3;UBERON:0003101!4.33e-08!22;UBERON:0000079!4.33e-08!22;UBERON:0009663!1.10e-07!7;UBERON:0002771!1.20e-07!3;UBERON:0000477!5.84e-07!286;UBERON:0002037!6.55e-07!6;UBERON:0006215!6.55e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004732;2.42e-31;13!UBERON:0004733;6.01e-28;12!UBERON:0002028;6.01e-28;12!UBERON:0002298;2.11e-25;6!UBERON:0000073;2.16e-17;53!UBERON:0002616;2.16e-17;53!UBERON:0002680;2.17e-17;9!UBERON:0001895;2.17e-17;9!UBERON:0001017;3.01e-15;75!UBERON:0001950;5.46e-15;20!UBERON:0002021;2.00e-14;5!UBERON:0000955;3.73e-14;68!UBERON:0000988;5.23e-14;3!UBERON:0002619;1.54e-13;22!UBERON:0001896;3.67e-13;3!UBERON:0005290;3.67e-13;3!UBERON:0000473;3.44e-12;8!UBERON:0001869;3.54e-12;32!UBERON:0002780;4.09e-12;41!UBERON:0001890;4.09e-12;41!UBERON:0000956;8.76e-12;25!UBERON:0000203;8.76e-12;25!UBERON:0003528;1.08e-11;34!UBERON:0002020;1.08e-11;34!UBERON:0001016;1.26e-11;83!UBERON:0001893;1.78e-11;34!UBERON:0002791;2.62e-10;32!UBERON:0002148;8.93e-10;2!UBERON:0006331;8.93e-10;2!UBERON:0009662;8.93e-10;2!UBERON:0001905;9.33e-10;2!UBERON:0002757;9.33e-10;2!UBERON:0010134;9.33e-10;2!UBERON:0005408;9.33e-10;2!UBERON:0001899;9.33e-10;2!UBERON:0007023;3.29e-09;114!UBERON:0003135;8.46e-09;11!UBERON:0001872;3.35e-08;5!UBERON:0002037;2.78e-07;6!UBERON:0000200;7.31e-07;6!UBERON:0002240;7.89e-07;3!UBERON:0005174;7.89e-07;3!UBERON:0001137;7.89e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.70e-42,81;UBERON:0001049,3.16e-41,56;UBERON:0005068,3.16e-41,56;UBERON:0006241,3.16e-41,56;UBERON:0007135,3.16e-41,56;UBERON:0001016,1.22e-39,89;UBERON:0000073,1.54e-36,53;UBERON:0002616,1.54e-36,53;UBERON:0003076,4.24e-33,15;UBERON:0003057,4.24e-33,15;UBERON:0000955,3.70e-32,68;UBERON:0006238,3.70e-32,68;UBERON:0004732,2.43e-31,13;UBERON:0003075,1.17e-28,82;UBERON:0007284,1.17e-28,82;UBERON:0004733,6.23e-28,12;UBERON:0002028,6.23e-28,12;UBERON:0007277,6.23e-28,12;UBERON:0002346,4.82e-27,86;UBERON:0002298,2.31e-25,6;UBERON:0007023,2.02e-22,114;UBERON:0010371,2.62e-21,104;UBERON:0002680,1.79e-17,9;UBERON:0001895,1.79e-17,9;UBERON:0010092,1.79e-17,9;UBERON:0004121,2.20e-17,171;UBERON:0000924,2.20e-17,171;UBERON:0006601,2.20e-17,171;UBERON:0002780,9.66e-17,41;UBERON:0001890,9.66e-17,41;UBERON:0003080,9.66e-17,41;UBERON:0006240,9.66e-17,41;UBERON:0010314,1.72e-15,132;UBERON:0003528,4.05e-15,34;UBERON:0002020,4.05e-15,34;UBERON:0001950,5.38e-15,20;UBERON:0002021,2.30e-14,5;UBERON:0000988,4.04e-14,3;UBERON:0011216,1.19e-13,223;UBERON:0002619,1.52e-13,22;UBERON:0001869,2.02e-13,32;UBERON:0001896,5.12e-13,3;UBERON:0005290,5.12e-13,3;UBERON:0010096,5.12e-13,3;UBERON:0001893,1.60e-12,34;UBERON:0000473,3.94e-12,8;UBERON:0003056,6.28e-12,61;UBERON:0000956,8.66e-12,25;UBERON:0000203,8.66e-12,25;UBERON:0002791,4.94e-11,32;UBERON:0002148,6.76e-10,2;UBERON:0006331,6.76e-10,2;UBERON:0009662,6.76e-10,2;UBERON:0001905,9.14e-10,2;UBERON:0002757,9.14e-10,2;UBERON:0010134,9.14e-10,2;UBERON:0005408,9.14e-10,2;UBERON:0001899,9.14e-10,2;UBERON:0000025,1.03e-09,192;UBERON:0003135,9.32e-09,11;UBERON:0001872,2.82e-08,5;UBERON:0002037,2.72e-07,6;UBERON:0006215,2.72e-07,6;UBERON:0000200,6.22e-07,6;UBERON:0002240,7.46e-07,3;UBERON:0005174,7.46e-07,3;UBERON:0001137,7.46e-07,3 | |||
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| ||
|short_description=p3@SYT2 | |||
}} | }} |
Latest revision as of 20:45, 19 September 2015
Short description: | p3@SYT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SYT2_5end |
Coexpression cluster: | C247_pons_locus_medulla_spinal_paracentral_medial_occipital |
Association with transcript: | -73bp_to_NM_177402, uc009xaf.2, uc010pqb.1_5end |
EntrezGene: | SYT2 |
HGNC: | 11510 |
UniProt: | Q8N9I0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.78e-20 | 5 |
germ line cell | 3.33e-09 | 7 |
germ cell | 3.33e-09 | 7 |