FFCP PHASE1:Hg19::chr5:58295680..58295699,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:58295680..58295699,- to FFCP PHASE1:Hg19::chr5:58295680..58295699,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5144 | |EntrezGene=5144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |HGNC=8783 | ||
|TSSclassifier=strong | |||
|UniProt=Q08499 | |UniProt=Q08499 | ||
|association_with_transcript=59bp_to_ENST00000317118,NM_001197223,uc003jrs.2_5end | |||
|cluster_id=chr5:58295680..58295699,- | |||
|description=CAGE_peak_36_at_PDE4D_5end | |||
|id=chr5:58295680..58295699,- | |||
|ontology_enrichment_celltype=CL:0002605!1.60e-09!3;CL:0000047!1.04e-08!8;CL:0000540!9.18e-08!6;CL:0000031!9.18e-08!6;CL:0000404!9.18e-08!6;CL:0002322!1.58e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002605;8.55e-19;3!CL:0002319;4.20e-10;25!CL:0000540;8.67e-10;6!CL:0000404;8.67e-10;6!CL:0000128;2.45e-08;7!CL:0000126;2.45e-08;7!CL:0000127;2.45e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,7.15e-19,3;CL:0000047,2.25e-12,8;CL:0002319,3.67e-10,25;CL:0000540,8.81e-10,6;CL:0000031,8.81e-10,6;CL:0000404,8.81e-10,6;CL:0000128,2.27e-08,7;CL:0000126,2.27e-08,7;CL:0000127,2.27e-08,7;CL:0002453,2.27e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.16e-18;3!CL:0000031;8.67e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.16e-86!57;UBERON:0005068!4.16e-86!57;UBERON:0006241!4.16e-86!57;UBERON:0007135!4.16e-86!57;UBERON:0001017!1.11e-83!82;UBERON:0005743!3.24e-79!86;UBERON:0002616!3.31e-75!59;UBERON:0002780!3.87e-73!41;UBERON:0001890!3.87e-73!41;UBERON:0006240!3.87e-73!41;UBERON:0000955!1.86e-71!69;UBERON:0006238!1.86e-71!69;UBERON:0003080!3.43e-71!42;UBERON:0000073!1.63e-70!94;UBERON:0001016!1.63e-70!94;UBERON:0002020!4.44e-61!34;UBERON:0003528!4.44e-61!34;UBERON:0001869!1.65e-60!32;UBERON:0001893!1.67e-60!34;UBERON:0002791!2.97e-58!33;UBERON:0003075!1.07e-55!86;UBERON:0007284!1.07e-55!86;UBERON:0002346!1.12e-52!90;UBERON:0003056!3.71e-46!61;UBERON:0000956!3.92e-44!25;UBERON:0000203!3.92e-44!25;UBERON:0000033!7.88e-37!123;UBERON:0002619!1.48e-36!22;UBERON:0004121!5.88e-35!169;UBERON:0000153!1.51e-34!129;UBERON:0007811!1.51e-34!129;UBERON:0000924!7.83e-34!173;UBERON:0006601!7.83e-34!173;UBERON:0007023!1.74e-32!115;UBERON:0001950!5.06e-32!20;UBERON:0000025!2.22e-22!194;UBERON:0002308!4.81e-18!9;UBERON:0000125!4.81e-18!9;UBERON:0003076!6.93e-16!15;UBERON:0003057!6.93e-16!15;UBERON:0004111!1.67e-15!241;UBERON:0001894!1.26e-13!7;UBERON:0006222!1.26e-13!7;UBERON:0002420!1.62e-13!9;UBERON:0007245!1.62e-13!9;UBERON:0010009!1.62e-13!9;UBERON:0010011!1.62e-13!9;UBERON:0000454!1.62e-13!9;UBERON:0009663!2.40e-13!7;UBERON:0004733!3.88e-13!12;UBERON:0002028!3.88e-13!12;UBERON:0007277!3.88e-13!12;UBERON:0001872!4.45e-13!5;UBERON:0004732!5.19e-12!13;UBERON:0000477!7.71e-12!286;UBERON:0000369!4.16e-11!4;UBERON:0002435!4.16e-11!4;UBERON:0000204!4.16e-11!4;UBERON:0010082!4.16e-11!4;UBERON:0000200!8.47e-11!6;UBERON:0000483!1.08e-10!309;UBERON:0000119!1.81e-10!312;UBERON:0000064!2.80e-10!219;UBERON:0002680!2.98e-10!9;UBERON:0001895!2.98e-10!9;UBERON:0010092!2.98e-10!9;UBERON:0000475!1.58e-09!365;UBERON:0002021!5.05e-09!5;UBERON:0005383!5.47e-09!3;UBERON:0005382!5.47e-09!3;UBERON:0000988!1.75e-08!3;UBERON:0000349!2.20e-08!5;UBERON:0002298!4.21e-08!8;UBERON:0001871!6.88e-08!7;UBERON:0003296!8.57e-07!4;UBERON:0010133!8.57e-07!4;UBERON:0001905!8.59e-07!2;UBERON:0002757!8.59e-07!2;UBERON:0010134!8.59e-07!2;UBERON:0002784!8.59e-07!2;UBERON:0005408!8.59e-07!2;UBERON:0001899!8.59e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;9.99e-36;32!UBERON:0001869;1.07e-34;32!UBERON:0003528;2.25e-34;34!UBERON:0002020;2.25e-34;34!UBERON:0000956;2.13e-30;25!UBERON:0000203;2.13e-30;25!UBERON:0001893;2.99e-29;34!UBERON:0000073;6.62e-29;53!UBERON:0002616;6.62e-29;53!UBERON:0002780;4.82e-28;41!UBERON:0001890;4.82e-28;41!UBERON:0000955;3.99e-26;68!UBERON:0001017;2.08e-22;75!UBERON:0002619;3.03e-19;22!UBERON:0001950;9.66e-17;20!UBERON:0001016;3.39e-16;83!UBERON:0002784;3.47e-14;4!UBERON:0001905;5.43e-13;2!UBERON:0002757;5.43e-13;2!UBERON:0010134;5.43e-13;2!UBERON:0005408;5.43e-13;2!UBERON:0001899;5.43e-13;2!UBERON:0004733;6.64e-12;12!UBERON:0002028;6.64e-12;12!UBERON:0002021;3.88e-11;5!UBERON:0004732;5.66e-11;13!UBERON:0000125;1.24e-10;9!UBERON:0002308;1.24e-10;9!UBERON:0002680;1.62e-10;9!UBERON:0001895;1.62e-10;9!UBERON:0002037;3.56e-09;6!UBERON:0005383;8.85e-09;3!UBERON:0005382;8.85e-09;3!UBERON:0001894;2.61e-08;7!UBERON:0009663;4.84e-08;7!UBERON:0001874;4.60e-07;1!UBERON:0003296;6.49e-07;4!UBERON:0010133;6.49e-07;4!UBERON:0000369;8.71e-07;4!UBERON:0002435;8.71e-07;4!UBERON:0000204;8.71e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.11e-52,53;UBERON:0002616,1.11e-52,53;UBERON:0001017,2.64e-50,81;UBERON:0001049,1.16e-49,56;UBERON:0005068,1.16e-49,56;UBERON:0006241,1.16e-49,56;UBERON:0007135,1.16e-49,56;UBERON:0001016,7.31e-45,89;UBERON:0000955,2.27e-43,68;UBERON:0006238,2.27e-43,68;UBERON:0002780,1.16e-41,41;UBERON:0001890,1.16e-41,41;UBERON:0003080,1.16e-41,41;UBERON:0006240,1.16e-41,41;UBERON:0003528,1.17e-39,34;UBERON:0002020,1.17e-39,34;UBERON:0002791,5.80e-37,32;UBERON:0001869,5.80e-37,32;UBERON:0001893,1.13e-34,34;UBERON:0003075,1.24e-32,82;UBERON:0007284,1.24e-32,82;UBERON:0002346,6.49e-31,86;UBERON:0000956,1.93e-30,25;UBERON:0000203,1.93e-30,25;UBERON:0003056,5.32e-27,61;UBERON:0010371,8.40e-25,104;UBERON:0004121,3.62e-21,171;UBERON:0000924,3.62e-21,171;UBERON:0006601,3.62e-21,171;UBERON:0002619,2.97e-19,22;UBERON:0010314,1.40e-18,132;UBERON:0011216,6.75e-18,223;UBERON:0001950,9.57e-17,20;UBERON:0002784,3.89e-14,4;UBERON:0001905,5.95e-13,2;UBERON:0002757,5.95e-13,2;UBERON:0010134,5.95e-13,2;UBERON:0005408,5.95e-13,2;UBERON:0001899,5.95e-13,2;UBERON:0000025,1.19e-12,192;UBERON:0004733,7.05e-12,12;UBERON:0002028,7.05e-12,12;UBERON:0007277,7.05e-12,12;UBERON:0002021,3.50e-11,5;UBERON:0007023,4.08e-11,114;UBERON:0004732,5.98e-11,13;UBERON:0000125,1.52e-10,9;UBERON:0002308,1.52e-10,9;UBERON:0002680,1.91e-10,9;UBERON:0001895,1.91e-10,9;UBERON:0010092,1.91e-10,9;UBERON:0003076,1.84e-09,15;UBERON:0003057,1.84e-09,15;UBERON:0004111,3.75e-09,240;UBERON:0002037,4.11e-09,6;UBERON:0006215,4.11e-09,6;UBERON:0005383,9.40e-09,3;UBERON:0005382,9.40e-09,3;UBERON:0001894,2.78e-08,7;UBERON:0006222,2.78e-08,7;UBERON:0009663,5.67e-08,7;UBERON:0001874,4.89e-07,1;UBERON:0003296,6.79e-07,4;UBERON:0010133,6.79e-07,4;UBERON:0000369,9.11e-07,4;UBERON:0002435,9.11e-07,4;UBERON:0000204,9.11e-07,4;UBERON:0010082,9.11e-07,4 | |||
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|short_description=p36@PDE4D | |||
}} | }} |
Latest revision as of 06:54, 18 September 2015
Short description: | p36@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_36_at_PDE4D_5end |
Coexpression cluster: | NA |
Association with transcript: | 59bp_to_ENST00000317118, NM_001197223, uc003jrs.2_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | Q08499 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 7.15e-19 | 3 |
neuronal stem cell | 2.25e-12 | 8 |
neural cell | 3.67e-10 | 25 |
neuron | 8.81e-10 | 6 |
neuroblast | 8.81e-10 | 6 |
electrically signaling cell | 8.81e-10 | 6 |
oligodendrocyte | 2.27e-08 | 7 |
macroglial cell | 2.27e-08 | 7 |
astrocyte | 2.27e-08 | 7 |
oligodendrocyte precursor cell | 2.27e-08 | 7 |