FFCP PHASE1:Hg19::chr9:101471364..101471387,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:101471364..101471387,- to FFCP PHASE1:Hg19::chr9:101471364..101471387,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9568 | |EntrezGene=9568 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4507 | |HGNC=4507 | ||
|TSSclassifier=strong | |||
|UniProt=O75899 | |UniProt=O75899 | ||
|association_with_transcript=91bp_to_ENST00000259455,NM_005458_5end | |||
|cluster_id=chr9:101471364..101471387,- | |||
|description=CAGE_peak_3_at_GABBR2_5end | |||
|id=chr9:101471364..101471387,- | |||
|ontology_enrichment_celltype=CL:0000071!3.19e-15!18;CL:0002546!3.19e-15!18;CL:0002139!6.44e-10!24;CL:0000115!7.59e-09!35;CL:1000413!8.16e-09!9;CL:0002620!4.92e-08!23;CL:0002543!7.24e-08!6;CL:0000055!5.26e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000071;2.74e-25;18!CL:0002139;4.14e-18;24!CL:1000413;6.12e-16;9!CL:0000115;3.82e-14;36!CL:0002543;2.08e-12;6!CL:0002544;1.84e-08;6!CL:0002078;7.10e-08;45!CL:0000213;1.08e-07;58!CL:0000215;1.08e-07;58!CL:0002494;1.30e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,1.33e-25,18;CL:0002546,1.33e-25,18;CL:0002139,2.45e-18,24;CL:0000115,4.70e-17,36;CL:1000413,4.77e-16,9;CL:0002078,8.51e-13,45;CL:0002543,1.28e-12,6;CL:0000213,2.85e-10,58;CL:0000215,2.85e-10,58;CL:0002544,1.84e-08,6;CL:0000222,5.50e-08,121;CL:0002494,1.26e-07,16 | |||
|ontology_enrichment_development_v019=CL:0002546;2.74e-25;18!UBERON:0006215;2.12e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!2.69e-30!194;UBERON:0000483!1.11e-24!309;UBERON:0000119!4.77e-24!312;UBERON:0001049!3.24e-21!57;UBERON:0005068!3.24e-21!57;UBERON:0006241!3.24e-21!57;UBERON:0007135!3.24e-21!57;UBERON:0004111!2.20e-20!241;UBERON:0004872!7.84e-20!84;UBERON:0001981!2.30e-19!60;UBERON:0007500!2.30e-19!60;UBERON:0004537!2.30e-19!60;UBERON:0006965!2.30e-19!60;UBERON:0000955!4.12e-19!69;UBERON:0006238!4.12e-19!69;UBERON:0002780!5.10e-19!41;UBERON:0001890!5.10e-19!41;UBERON:0006240!5.10e-19!41;UBERON:0005743!9.30e-19!86;UBERON:0001017!1.64e-18!82;UBERON:0003080!2.67e-18!42;UBERON:0000477!3.36e-18!286;UBERON:0002616!1.47e-17!59;UBERON:0001893!7.16e-17!34;UBERON:0002020!1.11e-16!34;UBERON:0003528!1.11e-16!34;UBERON:0003075!1.72e-16!86;UBERON:0007284!1.72e-16!86;UBERON:0002346!1.74e-16!90;UBERON:0000073!4.80e-16!94;UBERON:0001016!4.80e-16!94;UBERON:0002791!6.42e-16!33;UBERON:0001869!6.52e-16!32;UBERON:0000956!1.41e-15!25;UBERON:0000203!1.41e-15!25;UBERON:0001986!3.19e-15!18;UBERON:0004638!3.19e-15!18;UBERON:0004852!3.19e-15!18;UBERON:0003056!3.54e-15!61;UBERON:0000467!3.68e-15!625;UBERON:0000480!4.78e-15!626;UBERON:0000055!5.67e-15!69;UBERON:0001637!9.12e-15!42;UBERON:0003509!9.12e-15!42;UBERON:0004572!9.12e-15!42;UBERON:0000468!1.06e-14!659;UBERON:0002619!2.93e-14!22;UBERON:0003914!3.58e-14!118;UBERON:0000487!5.93e-13!22;UBERON:0001950!7.27e-13!20;UBERON:0000475!1.07e-12!365;UBERON:0002049!3.31e-12!79;UBERON:0007798!3.31e-12!79;UBERON:0000033!3.61e-12!123;UBERON:0000153!6.73e-12!129;UBERON:0007811!6.73e-12!129;UBERON:0004573!1.34e-11!33;UBERON:0004571!1.34e-11!33;UBERON:0000922!6.47e-11!612;UBERON:0002050!9.97e-11!605;UBERON:0005423!9.97e-11!605;UBERON:0004535!1.03e-10!110;UBERON:0006914!1.21e-10!25;UBERON:0001009!1.45e-10!113;UBERON:0000923!2.20e-10!604;UBERON:0005291!2.20e-10!604;UBERON:0006598!2.20e-10!604;UBERON:0002532!2.20e-10!604;UBERON:0000490!1.14e-09!138;UBERON:0003915!8.16e-09!9;UBERON:0004700!8.16e-09!9;UBERON:0001917!8.16e-09!9;UBERON:0000947!1.50e-08!21;UBERON:0010191!1.50e-08!21;UBERON:0007023!3.23e-08!115;UBERON:0000924!4.40e-08!173;UBERON:0006601!4.40e-08!173;UBERON:0004121!6.68e-08!169;UBERON:0000481!2.28e-07!347;UBERON:0000062!6.18e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.74e-25;18!UBERON:0001986;2.74e-25;18!UBERON:0004852;2.74e-25;18!UBERON:0002619;1.44e-20;22!UBERON:0000487;4.59e-20;22!UBERON:0001950;1.01e-19;20!UBERON:0000956;8.75e-18;25!UBERON:0000203;8.75e-18;25!UBERON:0006914;3.00e-17;25!UBERON:0003915;6.12e-16;9!UBERON:0004700;6.12e-16;9!UBERON:0001917;6.12e-16;9!UBERON:0001869;2.82e-15;32!UBERON:0001893;7.79e-15;34!UBERON:0001637;3.94e-13;42!UBERON:0003509;3.94e-13;42!UBERON:0004572;3.94e-13;42!UBERON:0007500;4.34e-13;56!UBERON:0001981;4.34e-13;56!UBERON:0004537;4.34e-13;56!UBERON:0002791;6.11e-13;32!UBERON:0003528;1.56e-12;34!UBERON:0002020;1.56e-12;34!UBERON:0002780;3.94e-12;41!UBERON:0001890;3.94e-12;41!UBERON:0000073;1.48e-11;53!UBERON:0002616;1.48e-11;53!UBERON:0000200;2.09e-11;6!UBERON:0000490;4.04e-11;33!UBERON:0001872;1.70e-09;5!UBERON:0004573;6.14e-09;33!UBERON:0004571;6.14e-09;33!UBERON:0000955;9.57e-09;68!UBERON:0003914;1.88e-08;74!UBERON:0001638;4.05e-08;9!UBERON:0003920;4.05e-08;9!UBERON:0004582;4.05e-08;9!UBERON:0001017;6.31e-08;75!UBERON:0000055;9.92e-08;65!UBERON:0000947;2.03e-07;21!UBERON:0010191;2.03e-07;21!UBERON:0002049;3.55e-07;75!UBERON:0007798;3.55e-07;75!UBERON:0000948;9.62e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,4.74e-35,192;UBERON:0004638,1.33e-25,18;UBERON:0001986,1.33e-25,18;UBERON:0004852,1.33e-25,18;UBERON:0004111,3.28e-25,240;UBERON:0004872,1.66e-22,83;UBERON:0001049,1.23e-21,56;UBERON:0005068,1.23e-21,56;UBERON:0006241,1.23e-21,56;UBERON:0007135,1.23e-21,56;UBERON:0000483,1.38e-21,306;UBERON:0000119,3.12e-21,309;UBERON:0010314,3.50e-21,132;UBERON:0007500,3.64e-21,59;UBERON:0001981,3.64e-21,59;UBERON:0004537,3.64e-21,59;UBERON:0006965,3.64e-21,59;UBERON:0000073,4.71e-21,53;UBERON:0002616,4.71e-21,53;UBERON:0002619,9.14e-21,22;UBERON:0000487,2.57e-20,22;UBERON:0001950,7.46e-20,20;UBERON:0002780,4.97e-19,41;UBERON:0001890,4.97e-19,41;UBERON:0003080,4.97e-19,41;UBERON:0006240,4.97e-19,41;UBERON:0003914,1.74e-18,117;UBERON:0000955,4.96e-18,68;UBERON:0006238,4.96e-18,68;UBERON:0000956,5.90e-18,25;UBERON:0000203,5.90e-18,25;UBERON:0001869,9.29e-18,32;UBERON:0000055,1.71e-17,68;UBERON:0006914,1.82e-17,25;UBERON:0001893,1.66e-16,34;UBERON:0003915,4.77e-16,9;UBERON:0004700,4.77e-16,9;UBERON:0001917,4.77e-16,9;UBERON:0001017,1.35e-15,81;UBERON:0002791,2.29e-15,32;UBERON:0004535,3.35e-15,109;UBERON:0001637,7.96e-15,42;UBERON:0003509,7.96e-15,42;UBERON:0004572,7.96e-15,42;UBERON:0001009,1.39e-14,112;UBERON:0002049,1.99e-14,78;UBERON:0007798,1.99e-14,78;UBERON:0003528,2.84e-14,34;UBERON:0002020,2.84e-14,34;UBERON:0003075,3.45e-14,82;UBERON:0007284,3.45e-14,82;UBERON:0001016,2.10e-13,89;UBERON:0002346,3.08e-13,86;UBERON:0000200,1.38e-11,6;UBERON:0003056,2.66e-11,61;UBERON:0010371,5.85e-11,104;UBERON:0001872,1.34e-09,5;UBERON:0007023,1.76e-09,114;UBERON:0004573,3.01e-09,33;UBERON:0004571,3.01e-09,33;UBERON:0000490,4.42e-09,148;UBERON:0001638,2.97e-08,9;UBERON:0003920,2.97e-08,9;UBERON:0004582,2.97e-08,9;UBERON:0000923,3.84e-08,560;UBERON:0010316,3.84e-08,560;UBERON:0005291,3.84e-08,560;UBERON:0006598,3.84e-08,560;UBERON:0010317,3.84e-08,560;UBERON:0002532,3.84e-08,560;UBERON:0002050,5.66e-08,564;UBERON:0000948,1.11e-07,24;UBERON:0005498,1.11e-07,24;UBERON:0004140,1.11e-07,24;UBERON:0009881,1.11e-07,24;UBERON:0004141,1.11e-07,24;UBERON:0003084,1.11e-07,24;UBERON:0007005,1.11e-07,24;UBERON:0004139,1.11e-07,24;UBERON:0004291,1.11e-07,24;UBERON:0000922,2.17e-07,592;UBERON:0005423,2.77e-07,581;UBERON:0000947,3.24e-07,21;UBERON:0010191,3.24e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0.982935746006035,0,0.218441372130172,0,0,0,0,1.20538905604795,0.730310090387373,0,0,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0.309706370895104,0.28769239232215,0.256160706529101,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0.364295288292542,0,0,0,0,0,0,0,4.77029777680092,0.860234595106124,9.37279354340505,2.26123176769604,11.7459842138774,3.85165258716094,2.92592953151535,0,0,0,0.402829317109147,1.52054421143703,0,6.98559852657151,0,0.803697554556718,1.79623498100936,3.82879033643296,7.66583187329416,3.79706263827252,5.49605231791222,0,0,0,0,0.379891534993739,0,0.573673241497627,1.06400514659507,0,2.1349799145941,0,0,2.42479209725439,6.53847612453835,0,0,0,0,1.1409436430889,0,0.23486899728753,0.809364721840658,1.12360645361799,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0.45071417671979,1.81491493056034,0.717558542755448,0,0.635795703478686,0.900273288253207,0.92747276314595,0.515281080091258,0.744467425326359,1.18143432568886,0.876933046450788,0.504867548488229,0.552299391853796,0,2.13005755509969,2.92181084860157,0,0,0,0,0.121973706129595,0,0,0,0,0,0,2.57296375277154,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,1.42156779497018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.462629081407967,0,0,1.55776328755086,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,1.13733384070897,1.87103075804167,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.827019434907183,0,0,0.170453254832202,0,0,0,0,0,0.464845549297286,0,0,2.15623506123262,1.06461206063404,0.869932992075073,0,0,0,0,0,0.255897791311334,0,0,1.56989728039846,0,0.54907405947211,0.353437207037059,0.404364963146632,1.58510321173008,1.26377536871694,0,0.731140468893853,0,0,0.707027159768564,0,0.551365343546124,1.32687795048244,0.438450885253763,0.578775534266688,0,0,1.54911749049875,0.845086807596724,0.430234056612155,0,0,0,0,0,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.703347082052564,1.55832187032068,0,0,0.19924798825107,0,0,0.102268682502155,0,0.933118762985422,0.0898683511473268,0,0,0,0,0,1.93866549219044,1.66982576691332,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,4.5774520895125,3.09621927807429,1.18219047581419,0.87754158861589,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.404406797884062,0.802577647298789,1.87411556580271,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,1.12990370390266,0,0,2.65905343014691,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0.209205692624666,0,0,0.600420288709789,0,1.27746588066972,0,0,0,0,0,0.199679000498991,0,0,0.201550417460179,1.44119953416961,0,0,0,0,0,0,1.59045937961861,0.272406812223151,0,0,0,0,0,2.06548492637284,0,0,0.0524545881349981,0,0.896436696664224,0.191915197319445,0,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785270481251171,0,1.83039397352945,1.752673029891,0,0,0.807253238237985,0.276697269872462,0.124980407962107,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,1.39893480524502,2.80924784980304,1.59296767163702,0,0,0,0,0,0,0,0.406870733204662,0.363697318405119,0.214821114084977,0.928067519756987,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,1.41351316756705,0,0,0,0,0,1.24432592536558,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,1.09189682663981,0,1.27707087245721,2.05116364240755,0.504143392443436,4.49522141017416,1.45328081068666,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,3.03919130782776,3.12431239445539,1.65349437200947,2.53663240775627,0,0,0,0,0,1.07140367175657,0.336283722218824,0,0,0.177404740325278,0,0,1.08751572762931,3.55172977239385,0,0,0,0.157115589916002,0,0,0,0,0.714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0.297046400327086,2.113278637917,0.679708458751268,0,0.322289439867886,0,0,0,0,0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| ||
|short_description=p3@GABBR2 | |||
}} | }} |
Latest revision as of 19:08, 19 September 2015
Short description: | p3@GABBR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GABBR2_5end |
Coexpression cluster: | NA |
Association with transcript: | 91bp_to_ENST00000259455, NM_005458_5end |
EntrezGene: | GABBR2 |
HGNC: | 4507 |
UniProt: | O75899 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 1.33e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.33e-25 | 18 |
endothelial cell of vascular tree | 2.45e-18 | 24 |
endothelial cell | 4.70e-17 | 36 |
endothelial cell of artery | 4.77e-16 | 9 |
meso-epithelial cell | 8.51e-13 | 45 |
vein endothelial cell | 1.28e-12 | 6 |
lining cell | 2.85e-10 | 58 |
barrier cell | 2.85e-10 | 58 |
aortic endothelial cell | 1.84e-08 | 6 |
mesodermal cell | 5.50e-08 | 121 |
cardiocyte | 1.26e-07 | 16 |