FFCP PHASE1:Hg19::chr10:118764649..118764683,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57698 | |EntrezGene=57698 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29319 | |HGNC=29319 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=192bp_to_ENST00000260777_5end | |association_with_transcript=192bp_to_ENST00000260777_5end | ||
|cluster_id=chr10:118764649..118764683,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_KIAA1598_5end | |description=CAGE_peak_2_at_KIAA1598_5end | ||
|id=chr10:118764649..118764683,- | |id=chr10:118764649..118764683,- | ||
|ontology_enrichment_celltype=CL:0002009!6.53e-20!65;CL:0002194!5.13e-19!63;CL:0000576!5.13e-19!63;CL:0000040!5.13e-19!63;CL:0000559!5.13e-19!63;CL:0000557!1.70e-16!71;CL:0000860!5.58e-16!45;CL:0002057!1.21e-15!42;CL:0000839!4.53e-14!70;CL:0000766!3.54e-12!76 | |ontology_enrichment_celltype=CL:0002009!6.53e-20!65;CL:0002194!5.13e-19!63;CL:0000576!5.13e-19!63;CL:0000040!5.13e-19!63;CL:0000559!5.13e-19!63;CL:0000557!1.70e-16!71;CL:0000860!5.58e-16!45;CL:0002057!1.21e-15!42;CL:0000839!4.53e-14!70;CL:0000766!3.54e-12!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.48e-14;33!CL:0002057;8.48e-14;33!CL:0000473;2.38e-13;39!CL:0000234;2.38e-13;39!CL:0000576;3.12e-11;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,2.97e-20,61;CL:0002194,2.40e-19,59;CL:0000576,2.40e-19,59;CL:0000040,2.40e-19,59;CL:0000559,2.40e-19,59;CL:0000473,9.83e-18,48;CL:0000234,9.83e-18,48;CL:0000557,3.28e-16,67;CL:0000860,1.03e-15,42;CL:0002057,1.03e-15,42;CL:0000839,9.20e-14,66;CL:0000766,5.39e-12,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.11e-11;42!UBERON:0006601;9.18e-10;82 | |||
|ontology_enrichment_disease=DOID:305!2.12e-09!106;DOID:0050687!4.15e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.77e-09,106;DOID:0050687,3.83e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0005743!2.26e-30!86;UBERON:0001017!2.95e-30!82;UBERON:0000062!3.31e-30!511;UBERON:0001049!1.20e-29!57;UBERON:0005068!1.20e-29!57;UBERON:0006241!1.20e-29!57;UBERON:0007135!1.20e-29!57;UBERON:0000073!1.37e-26!94;UBERON:0001016!1.37e-26!94;UBERON:0000955!1.55e-26!69;UBERON:0006238!1.55e-26!69;UBERON:0003080!6.82e-25!42;UBERON:0002780!1.30e-24!41;UBERON:0001890!1.30e-24!41;UBERON:0006240!1.30e-24!41;UBERON:0002616!1.32e-24!59;UBERON:0000467!6.38e-24!625;UBERON:0007023!8.70e-24!115;UBERON:0000468!1.08e-23!659;UBERON:0000480!1.60e-23!626;UBERON:0000922!2.44e-22!612;UBERON:0002050!6.75e-22!605;UBERON:0005423!6.75e-22!605;UBERON:0000923!7.26e-22!604;UBERON:0005291!7.26e-22!604;UBERON:0006598!7.26e-22!604;UBERON:0002532!7.26e-22!604;UBERON:0002346!1.01e-21!90;UBERON:0003075!8.86e-21!86;UBERON:0007284!8.86e-21!86;UBERON:0002020!1.66e-20!34;UBERON:0003528!1.66e-20!34;UBERON:0001893!1.83e-20!34;UBERON:0002791!7.16e-20!33;UBERON:0001869!4.23e-19!32;UBERON:0000033!1.00e-18!123;UBERON:0000924!3.26e-18!173;UBERON:0006601!3.26e-18!173;UBERON:0000153!2.10e-17!129;UBERON:0007811!2.10e-17!129;UBERON:0004121!2.60e-17!169;UBERON:0003056!1.59e-16!61;UBERON:0000956!6.57e-15!25;UBERON:0000203!6.57e-15!25;UBERON:0002619!1.16e-14!22;UBERON:0001950!1.99e-13!20;UBERON:0002371!1.52e-12!80;UBERON:0001474!3.49e-11!86;UBERON:0002390!1.05e-09!102;UBERON:0003061!1.05e-09!102;UBERON:0000025!2.48e-09!194;UBERON:0004111!3.13e-09!241;UBERON:0002405!4.04e-09!115;UBERON:0004765!5.24e-09!101;UBERON:0001434!5.24e-09!101;UBERON:0002193!1.34e-08!112;UBERON:0000477!3.77e-07!286;UBERON:0002308!4.35e-07!9;UBERON:0000125!4.35e-07!9;UBERON:0002420!6.38e-07!9;UBERON:0007245!6.38e-07!9;UBERON:0010009!6.38e-07!9;UBERON:0010011!6.38e-07!9;UBERON:0000454!6.38e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.70e-18;41!UBERON:0001890;4.70e-18;41!UBERON:0001893;1.03e-17;34!UBERON:0003528;1.07e-17;34!UBERON:0002020;1.07e-17;34!UBERON:0002791;1.37e-17;32!UBERON:0001869;1.67e-17;32!UBERON:0000073;1.94e-16;53!UBERON:0002616;1.94e-16;53!UBERON:0000956;4.73e-15;25!UBERON:0000203;4.73e-15;25!UBERON:0002619;8.94e-15;22!UBERON:0001950;1.58e-13;20!UBERON:0001017;1.01e-12;75!UBERON:0000955;4.29e-12;68!UBERON:0001016;1.98e-10;83!UBERON:0007023;9.05e-08;114!UBERON:0000125;3.81e-07;9!UBERON:0002308;3.81e-07;9!UBERON:0002420;5.66e-07;9!UBERON:0007245;5.66e-07;9!UBERON:0010009;5.66e-07;9!UBERON:0010011;5.66e-07;9!UBERON:0000454;5.66e-07;9 | |||
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| ||
|short_description=p2@KIAA1598 | |short_description=p2@KIAA1598 | ||
}} | }} |
Latest revision as of 14:55, 16 September 2015
Short description: | p2@KIAA1598 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KIAA1598_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 192bp_to_ENST00000260777_5end |
EntrezGene: | KIAA1598 |
HGNC: | 29319 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 2.97e-20 | 61 |
monopoietic cell | 2.40e-19 | 59 |
monocyte | 2.40e-19 | 59 |
monoblast | 2.40e-19 | 59 |
promonocyte | 2.40e-19 | 59 |
defensive cell | 9.83e-18 | 48 |
phagocyte | 9.83e-18 | 48 |
granulocyte monocyte progenitor cell | 3.28e-16 | 67 |
classical monocyte | 1.03e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.03e-15 | 42 |
myeloid lineage restricted progenitor cell | 9.20e-14 | 66 |
myeloid leukocyte | 5.39e-12 | 72 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.77e-09 | 106 |
cell type cancer | 3.83e-08 | 143 |