FFCP PHASE1:Hg19::chr11:35547277..35547288,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25891 | |EntrezGene=25891 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24554 | |HGNC=24554 | ||
|TSSclassifier=strong | |||
|UniProt=E9PQ70 | |UniProt=E9PQ70 | ||
|association_with_transcript=0bp_to_ENST00000527605_5end | |association_with_transcript=0bp_to_ENST00000527605_5end | ||
|cluster_id=chr11:35547277..35547288,- | |||
|coexpression_cluster_id=C3150 | |||
|description=CAGE_peak_2_at_PAMR1_5end | |description=CAGE_peak_2_at_PAMR1_5end | ||
|id=chr11:35547277..35547288,- | |id=chr11:35547277..35547288,- | ||
|ontology_enrichment_celltype=CL:0000055!2.09e-32!180;CL:0000057!2.15e-25!75;CL:0000680!1.34e-16!57;CL:0000056!1.34e-16!57;CL:0000355!1.34e-16!57;CL:0000187!4.93e-16!54;CL:0000183!1.62e-14!59;CL:0000192!2.53e-13!42;CL:0000514!2.53e-13!42;CL:0000393!1.64e-12!60;CL:0000211!1.64e-12!60;CL:0002494!1.30e-09!16;CL:0000359!3.55e-09!32;CL:0002620!1.81e-08!23;CL:0002334!4.62e-08!12 | |ontology_enrichment_celltype=CL:0000055!2.09e-32!180;CL:0000057!2.15e-25!75;CL:0000680!1.34e-16!57;CL:0000056!1.34e-16!57;CL:0000355!1.34e-16!57;CL:0000187!4.93e-16!54;CL:0000183!1.62e-14!59;CL:0000192!2.53e-13!42;CL:0000514!2.53e-13!42;CL:0000393!1.64e-12!60;CL:0000211!1.64e-12!60;CL:0002494!1.30e-09!16;CL:0000359!3.55e-09!32;CL:0002620!1.81e-08!23;CL:0002334!4.62e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0000057;1.94e-11;73!CL:0002494;1.26e-10;16!CL:0002334;5.35e-10;12!CL:0000192;2.19e-09;43!CL:0000359;6.28e-09;32!CL:0002620;4.42e-08;23!CL:0002539;4.51e-08;10!CL:0000187;5.47e-08;55!CL:0000393;2.43e-07;61!CL:0000211;2.43e-07;61!CL:0000134;6.63e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.31e-28,76;CL:0000187,3.87e-14,55;CL:0000680,8.35e-14,58;CL:0000056,8.35e-14,58;CL:0000355,8.35e-14,58;CL:0000192,2.51e-12,43;CL:0000514,2.51e-12,43;CL:0000393,1.60e-11,61;CL:0000211,1.60e-11,61;CL:0002494,2.14e-10,16;CL:0002334,3.82e-10,12;CL:0000359,4.86e-09,32;CL:0000048,7.61e-09,427;CL:0000723,1.65e-08,433;CL:0002539,3.69e-08,10;CL:0002620,7.51e-08,23;CL:0000034,1.02e-07,441;CL:0002570,8.76e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000514;2.19e-09;43!CL:0000355;1.03e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;6.19e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.37e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!5.62e-23!365;UBERON:0000914!6.22e-22!83;UBERON:0002329!6.22e-22!83;UBERON:0003077!6.22e-22!83;UBERON:0003059!6.22e-22!83;UBERON:0007282!6.22e-22!83;UBERON:0009618!6.22e-22!83;UBERON:0007285!6.22e-22!83;UBERON:0004290!3.02e-17!70;UBERON:0002385!1.23e-16!63;UBERON:0001015!1.23e-16!63;UBERON:0000383!1.23e-16!63;UBERON:0001134!1.65e-16!61;UBERON:0002036!1.65e-16!61;UBERON:0003082!1.65e-16!61;UBERON:0000481!4.76e-15!347;UBERON:0000486!4.58e-14!82;UBERON:0005256!9.47e-14!143;UBERON:0000119!2.31e-13!312;UBERON:0000483!8.17e-13!309;UBERON:0000477!9.98e-13!286;UBERON:0000033!5.76e-12!123;UBERON:0000153!2.21e-11!129;UBERON:0007811!2.21e-11!129;UBERON:0004111!3.51e-11!241;UBERON:0003102!5.78e-11!95;UBERON:0000468!6.85e-11!659;UBERON:0002616!1.73e-10!59;UBERON:0007023!1.94e-10!115;UBERON:0001049!2.55e-10!57;UBERON:0005068!2.55e-10!57;UBERON:0006241!2.55e-10!57;UBERON:0007135!2.55e-10!57;UBERON:0000948!7.27e-10!24;UBERON:0005498!7.27e-10!24;UBERON:0004140!7.27e-10!24;UBERON:0009881!7.27e-10!24;UBERON:0004141!7.27e-10!24;UBERON:0003084!7.27e-10!24;UBERON:0007005!7.27e-10!24;UBERON:0004139!7.27e-10!24;UBERON:0004291!7.27e-10!24;UBERON:0003075!1.84e-09!86;UBERON:0007284!1.84e-09!86;UBERON:0007100!2.41e-09!27;UBERON:0000467!4.90e-09!625;UBERON:0002346!6.14e-09!90;UBERON:0000480!6.81e-09!626;UBERON:0000025!7.35e-09!194;UBERON:0000955!1.16e-08!69;UBERON:0006238!1.16e-08!69;UBERON:0002100!1.27e-08!216;UBERON:0001135!9.69e-08!15;UBERON:0000062!2.11e-07!511;UBERON:0003080!3.11e-07!42;UBERON:0000490!3.17e-07!138;UBERON:0004872!3.20e-07!84;UBERON:0004573!3.75e-07!33;UBERON:0004571!3.75e-07!33;UBERON:0001017!4.31e-07!82;UBERON:0004121!5.03e-07!169;UBERON:0000479!5.50e-07!787;UBERON:0002780!6.31e-07!41;UBERON:0001890!6.31e-07!41;UBERON:0006240!6.31e-07!41;UBERON:0002020!8.58e-07!34;UBERON:0003528!8.58e-07!34;UBERON:0000924!8.62e-07!173;UBERON:0006601!8.62e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;8.98e-09;22!UBERON:0004237;4.51e-08;10!UBERON:0004695;4.51e-08;10!UBERON:0002111;4.51e-08;10!UBERON:0004178;4.51e-08;10!UBERON:0001135;5.05e-08;15!UBERON:0007100;4.35e-07;25!UBERON:0001013;6.01e-07;14!UBERON:0004573;7.48e-07;33!UBERON:0004571;7.48e-07;33 | |||
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| ||
|short_description=p2@PAMR1 | |short_description=p2@PAMR1 | ||
}} | }} |
Latest revision as of 20:51, 17 September 2015
Short description: | p2@PAMR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PAMR1_5end |
Coexpression cluster: | C3150_mesenchymal_Smooth_Mesenchymal_Fibroblast_Prostate_Anulus_Trabecular |
Association with transcript: | 0bp_to_ENST00000527605_5end |
EntrezGene: | PAMR1 |
HGNC: | 24554 |
UniProt: | E9PQ70 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.31e-28 | 76 |
muscle cell | 3.87e-14 | 55 |
muscle precursor cell | 8.35e-14 | 58 |
myoblast | 8.35e-14 | 58 |
multi-potent skeletal muscle stem cell | 8.35e-14 | 58 |
smooth muscle cell | 2.51e-12 | 43 |
smooth muscle myoblast | 2.51e-12 | 43 |
electrically responsive cell | 1.60e-11 | 61 |
electrically active cell | 1.60e-11 | 61 |
cardiocyte | 2.14e-10 | 16 |
preadipocyte | 3.82e-10 | 12 |
vascular associated smooth muscle cell | 4.86e-09 | 32 |
multi fate stem cell | 7.61e-09 | 427 |
somatic stem cell | 1.65e-08 | 433 |
aortic smooth muscle cell | 3.69e-08 | 10 |
skin fibroblast | 7.51e-08 | 23 |
stem cell | 1.02e-07 | 441 |
mesenchymal stem cell of adipose | 8.76e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.37e-07 | 14 |