FFCP PHASE1:Hg19::chr1:165414382..165414394,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6258|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10479|TSSclassifier=S|UniProt=|association_with_transcript=14bp_to_ENST00000465764_5end|coexpression_cluster_id=C2539|description=CAGE_peak_4_at_RXRG_5end|id=chr1:165414382..165414394,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010122;3.24e-15;2!UBERON:0006601;1.15e-10;82!UBERON:0006222;1.31e-08;1!UBERON:0010227;2.17e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1909;4.96e-15;2|ontology_enrichment_disease_v019_2=DOID:1909,3.37e-15,2|ontology_enrichment_uberon=UBERON:0001049!4.03e-62!57;UBERON:0005068!4.03e-62!57;UBERON:0006241!4.03e-62!57;UBERON:0007135!4.03e-62!57;UBERON:0007023!5.78e-60!115;UBERON:0005743!2.00e-55!86;UBERON:0001017!5.68e-54!82;UBERON:0002616!3.48e-51!59;UBERON:0000955!1.29e-50!69;UBERON:0006238!1.29e-50!69;UBERON:0002780!2.39e-50!41;UBERON:0001890!2.39e-50!41;UBERON:0006240!2.39e-50!41;UBERON:0002346!5.71e-50!90;UBERON:0003080!6.49e-49!42;UBERON:0000073!9.83e-49!94;UBERON:0001016!9.83e-49!94;UBERON:0003075!1.04e-48!86;UBERON:0007284!1.04e-48!86;UBERON:0003056!7.42e-39!61;UBERON:0001893!7.78e-37!34;UBERON:0002020!1.36e-36!34;UBERON:0003528!1.36e-36!34;UBERON:0002791!4.82e-35!33;UBERON:0000924!1.24e-33!173;UBERON:0006601!1.24e-33!173;UBERON:0001869!1.26e-33!32;UBERON:0000033!2.90e-32!123;UBERON:0004121!3.06e-32!169;UBERON:0000153!2.05e-31!129;UBERON:0007811!2.05e-31!129;UBERON:0002619!8.37e-25!22;UBERON:0001950!2.88e-24!20;UBERON:0000956!2.56e-21!25;UBERON:0000203!2.56e-21!25;UBERON:0002420!2.17e-18!9;UBERON:0007245!2.17e-18!9;UBERON:0010009!2.17e-18!9;UBERON:0010011!2.17e-18!9;UBERON:0000454!2.17e-18!9;UBERON:0002308!3.83e-18!9;UBERON:0000125!3.83e-18!9;UBERON:0000025!7.79e-17!194;UBERON:0001894!1.11e-15!7;UBERON:0006222!1.11e-15!7;UBERON:0009663!7.09e-15!7;UBERON:0003076!6.65e-14!15;UBERON:0003057!6.65e-14!15;UBERON:0004111!1.95e-13!241;UBERON:0002298!4.76e-12!8;UBERON:0000483!7.68e-12!309;UBERON:0001871!1.29e-11!7;UBERON:0000119!1.44e-11!312;UBERON:0000477!2.94e-11!286;UBERON:0003296!5.99e-10!4;UBERON:0010133!5.99e-10!4;UBERON:0000064!7.01e-10!219;UBERON:0000369!9.01e-10!4;UBERON:0002435!9.01e-10!4;UBERON:0000204!9.01e-10!4;UBERON:0010082!9.01e-10!4;UBERON:0004733!1.73e-09!12;UBERON:0002028!1.73e-09!12;UBERON:0007277!1.73e-09!12;UBERON:0000475!5.97e-09!365;UBERON:0000062!7.09e-09!511;UBERON:0004732!1.22e-08!13;UBERON:0000200!2.57e-08!6;UBERON:0005383!8.93e-08!3;UBERON:0005382!8.93e-08!3;UBERON:0000481!2.31e-07!347;UBERON:0000349!2.47e-07!5;UBERON:0001872!3.93e-07!5;UBERON:0001896!4.50e-07!3;UBERON:0005290!4.50e-07!3;UBERON:0010096!4.50e-07!3;UBERON:0000988!5.52e-07!3;UBERON:0002021!7.72e-07!5|ontology_enrichment_uberon_v019=UBERON:0001894;3.21e-36;7!UBERON:0002780;3.38e-29;41!UBERON:0001890;3.38e-29;41!UBERON:0003296;3.89e-29;4!UBERON:0010133;3.89e-29;4!UBERON:0000369;3.47e-28;4!UBERON:0002435;3.47e-28;4!UBERON:0000204;3.47e-28;4!UBERON:0009663;5.90e-25;7!UBERON:0000073;1.00e-24;53!UBERON:0002616;1.00e-24;53!UBERON:0005383;7.39e-22;3!UBERON:0005382;7.39e-22;3!UBERON:0000955;2.06e-20;68!UBERON:0002420;2.19e-19;9!UBERON:0000125;2.19e-19;9!UBERON:0007245;2.19e-19;9!UBERON:0002308;2.19e-19;9!UBERON:0010009;2.19e-19;9!UBERON:0010011;2.19e-19;9!UBERON:0000454;2.19e-19;9!UBERON:0001017;6.49e-19;75!UBERON:0001869;3.50e-17;32!UBERON:0002784;1.83e-16;4!UBERON:0000007;1.59e-15;2!UBERON:0001905;2.04e-15;2!UBERON:0002757;2.04e-15;2!UBERON:0010134;2.04e-15;2!UBERON:0005408;2.04e-15;2!UBERON:0001899;2.04e-15;2!UBERON:0001893;3.15e-15;34!UBERON:0001873;3.24e-15;2!UBERON:0002791;5.84e-15;32!UBERON:0003528;2.41e-13;34!UBERON:0002020;2.41e-13;34!UBERON:0001016;3.93e-12;83!UBERON:0007023;1.34e-08;114!UBERON:0002079;2.17e-08;1!UBERON:0001874;2.17e-08;1!UBERON:0001882;4.40e-08;1!UBERON:0002022;4.40e-08;1!UBERON:0007190;4.40e-08;1!UBERON:0005403;4.40e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.70e-40,56;UBERON:0005068,1.70e-40,56;UBERON:0006241,1.70e-40,56;UBERON:0007135,1.70e-40,56;UBERON:0002780,1.55e-39,41;UBERON:0001890,1.55e-39,41;UBERON:0003080,1.55e-39,41;UBERON:0006240,1.55e-39,41;UBERON:0000073,1.84e-38,53;UBERON:0002616,1.84e-38,53;UBERON:0001894,3.53e-36,7;UBERON:0006222,3.53e-36,7;UBERON:0001017,5.50e-33,81;UBERON:0000955,2.31e-32,68;UBERON:0006238,2.31e-32,68;UBERON:0003075,9.45e-30,82;UBERON:0007284,9.45e-30,82;UBERON:0001016,2.27e-29,89;UBERON:0003056,2.93e-29,61;UBERON:0003296,5.00e-29,4;UBERON:0010133,5.00e-29,4;UBERON:0000369,1.92e-28,4;UBERON:0002435,1.92e-28,4;UBERON:0000204,1.92e-28,4;UBERON:0010082,1.92e-28,4;UBERON:0002346,3.31e-28,86;UBERON:0010371,4.60e-28,104;UBERON:0009663,3.60e-25,7;UBERON:0005383,6.66e-22,3;UBERON:0005382,6.66e-22,3;UBERON:0007023,1.36e-20,114;UBERON:0002420,1.49e-19,9;UBERON:0000125,1.49e-19,9;UBERON:0007245,1.49e-19,9;UBERON:0002308,1.49e-19,9;UBERON:0010009,1.49e-19,9;UBERON:0010011,1.49e-19,9;UBERON:0000454,1.49e-19,9;UBERON:0001869,2.25e-19,32;UBERON:0010314,4.01e-19,132;UBERON:0004121,1.04e-18,171;UBERON:0000924,1.04e-18,171;UBERON:0006601,1.04e-18,171;UBERON:0001893,3.59e-18,34;UBERON:0002784,1.83e-16,4;UBERON:0002791,9.11e-16,32;UBERON:0000007,1.77e-15,2;UBERON:0001905,2.36e-15,2;UBERON:0002757,2.36e-15,2;UBERON:0010134,2.36e-15,2;UBERON:0005408,2.36e-15,2;UBERON:0001899,2.36e-15,2;UBERON:0001873,3.14e-15,2;UBERON:0010122,3.14e-15,2;UBERON:0003528,8.73e-15,34;UBERON:0002020,8.73e-15,34;UBERON:0011216,1.18e-10,223;UBERON:0000025,1.35e-10,192;UBERON:0001874,2.02e-08,1;UBERON:0002079,2.33e-08,1;UBERON:0001882,2.69e-08,1;UBERON:0005403,2.69e-08,1;UBERON:0007190,6.24e-08,1;UBERON:0002022,7.16e-08,1;UBERON:0000483,1.02e-07,306;UBERON:0004111,1.04e-07,240;UBERON:0000119,1.33e-07,309|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829288440122964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,1.17217447210047,0,0.205654985406647,0,1.14330573052231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0.994147647766298,0.562677665642051,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0,3.54296554325536,2.41192877250816,0,0.221158519862449,0,1.31631238292384,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0.176915129006678,0,0,0,0,0.67401132980677,0,4.2167600230561,0,0,0,0,0,1.53036380815245,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.387956065953678,0,1.35588444468319,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60252173225874,0.410716136675979,0,0,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0.446342914883745,0.268733889946905,0,0,0,0,0,0,0,0,2.86027152834309,0,0,0,0,0,1.03274246318642,0,0,0,0,0,0,2.1440859791201,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.52893040697076,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.876336514945499,0.573409195690071,0.776503360757966,1.67660287941735,0.276697269872462,0,1.97143852804142,5.42384133735438,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0.247871528518004,0,0,0,0.80057074828547,0,0,1.99110597799025,0,0.478901577171454,0.82046545696302,0.756215088665154,0.760729777106397,0.968853873791107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,0,0.620060389503552,0.634158101939068,5.4697480901822,0.548257766857182,0,0,0,2.14280734351315,7.0619581665953,3.03482802118316,6.82986574053893,0,0,0,3.19457744991109,0.789273282754189,0,0,0.078493092850514,2.51384943865603,0,0,0,0,1.92986669276972,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0.769583617218004,0,0.154348316215889,0.437119121007915,0,0.245148321753905,0,0.196308467114945,0.594092800654172,1.2679671827502,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0.430018749454354,0,0.475940431336403,1.30905207102113,0,0,0,0,0,0.109265571963696,0.760191006068622,0,0,0,0,0.0757786982182394,0,1.65833887891756,0.724030971033267,0.213233981900981,0,0,0,0,0.12729431655633,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0|short_description=p4@RXRG}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6258 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10479 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=14bp_to_ENST00000465764_5end | |||
|coexpression_cluster_id=C2539 | |||
|description=CAGE_peak_4_at_RXRG_5end | |||
|id=chr1:165414382..165414394,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.24e-15;2!UBERON:0006601;1.15e-10;82!UBERON:0006222;1.31e-08;1!UBERON:0010227;2.17e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;4.96e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.37e-15,2 | |||
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|short_description=p4@RXRG | |||
}} |
Revision as of 01:32, 12 September 2013
Short description: | p4@RXRG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_RXRG_5end |
Coexpression cluster: | C2539_pineal_small_pituitary_parietal_melanoma_eye_diencephalon |
Association with transcript: | 14bp_to_ENST00000465764_5end |
EntrezGene: | RXRG |
HGNC: | 10479 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanoma | 3.37e-15 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.