FFCP PHASE1:Hg19::chr20:9495430..9495472,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=24141|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16097|TSSclassifier=W|UniProt=Q9UJQ1|association_with_transcript=159bp_to_ENST00000427562,uc002wni.1,uc010zrc.1_5end|coexpression_cluster_id=C1485|description=CAGE_peak_2_at_LAMP5_5end|id=chr20:9495430..9495472,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000784;1.64e-07;3|ontology_enrichment_celltype_v019_2=CL:0000784,1.61e-07,3|ontology_enrichment_development_v019=UBERON:0006601;3.18e-11;82!UBERON:0006241;9.91e-07;3!UBERON:0003057;9.91e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.79e-50!57;UBERON:0005068!2.79e-50!57;UBERON:0006241!2.79e-50!57;UBERON:0007135!2.79e-50!57;UBERON:0001017!5.33e-50!82;UBERON:0005743!2.09e-48!86;UBERON:0000073!4.03e-45!94;UBERON:0001016!4.03e-45!94;UBERON:0007023!1.13e-44!115;UBERON:0002616!2.12e-41!59;UBERON:0000955!6.21e-40!69;UBERON:0006238!6.21e-40!69;UBERON:0002780!1.00e-38!41;UBERON:0001890!1.00e-38!41;UBERON:0006240!1.00e-38!41;UBERON:0003080!1.89e-37!42;UBERON:0003075!2.08e-37!86;UBERON:0007284!2.08e-37!86;UBERON:0002346!9.52e-35!90;UBERON:0001893!1.27e-34!34;UBERON:0002020!1.29e-34!34;UBERON:0003528!1.29e-34!34;UBERON:0002791!1.72e-33!33;UBERON:0001869!2.85e-33!32;UBERON:0002619!1.54e-25!22;UBERON:0003056!3.75e-25!61;UBERON:0000956!3.78e-25!25;UBERON:0000203!3.78e-25!25;UBERON:0000153!7.80e-25!129;UBERON:0007811!7.80e-25!129;UBERON:0004121!1.58e-24!169;UBERON:0000033!1.59e-23!123;UBERON:0001950!1.87e-23!20;UBERON:0000924!2.36e-23!173;UBERON:0006601!2.36e-23!173;UBERON:0003076!1.58e-13!15;UBERON:0003057!1.58e-13!15;UBERON:0002420!3.15e-11!9;UBERON:0007245!3.15e-11!9;UBERON:0010009!3.15e-11!9;UBERON:0010011!3.15e-11!9;UBERON:0000454!3.15e-11!9;UBERON:0002308!7.54e-11!9;UBERON:0000125!7.54e-11!9;UBERON:0004733!1.64e-10!12;UBERON:0002028!1.64e-10!12;UBERON:0007277!1.64e-10!12;UBERON:0001871!4.37e-10!7;UBERON:0004732!1.89e-09!13;UBERON:0004111!2.50e-09!241;UBERON:0009663!5.87e-09!7;UBERON:0000025!6.06e-09!194;UBERON:0000477!8.25e-09!286;UBERON:0000200!4.74e-08!6;UBERON:0002680!2.34e-07!9;UBERON:0001895!2.34e-07!9;UBERON:0010092!2.34e-07!9;UBERON:0002298!3.36e-07!8;UBERON:0000349!3.38e-07!5;UBERON:0001872!9.67e-07!5|ontology_enrichment_uberon_v019=UBERON:0001869;1.31e-43;32!UBERON:0001893;1.07e-41;34!UBERON:0002619;6.88e-41;22!UBERON:0002791;7.78e-41;32!UBERON:0003528;2.21e-39;34!UBERON:0002020;2.21e-39;34!UBERON:0002780;8.58e-38;41!UBERON:0001890;8.58e-38;41!UBERON:0001950;1.64e-37;20!UBERON:0000956;2.55e-35;25!UBERON:0000203;2.55e-35;25!UBERON:0000073;1.38e-33;53!UBERON:0002616;1.38e-33;53!UBERON:0001017;1.23e-23;75!UBERON:0000955;4.79e-21;68!UBERON:0001016;1.44e-19;83!UBERON:0002420;1.23e-14;9!UBERON:0007245;1.23e-14;9!UBERON:0010009;1.23e-14;9!UBERON:0010011;1.23e-14;9!UBERON:0000454;1.23e-14;9!UBERON:0001871;5.63e-14;6!UBERON:0000200;2.91e-12;6!UBERON:0000125;2.52e-11;9!UBERON:0002308;2.52e-11;9!UBERON:0009663;5.50e-11;7!UBERON:0000349;9.63e-11;5!UBERON:0001872;4.52e-10;5!UBERON:0000369;6.50e-10;4!UBERON:0002435;6.50e-10;4!UBERON:0000204;6.50e-10;4!UBERON:0011216;7.90e-10;132!UBERON:0004733;1.21e-09;12!UBERON:0002028;1.21e-09;12!UBERON:0002021;1.25e-09;5!UBERON:0002298;3.75e-09;6!UBERON:0004732;8.89e-09;13!UBERON:0007023;1.62e-08;114!UBERON:0005383;7.54e-08;3!UBERON:0005382;7.54e-08;3!UBERON:0001896;4.41e-07;3!UBERON:0005290;4.41e-07;3!UBERON:0001870;8.55e-07;3!UBERON:0002240;9.91e-07;3!UBERON:0005174;9.91e-07;3!UBERON:0001137;9.91e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.24e-66,56;UBERON:0005068,2.24e-66,56;UBERON:0006241,2.24e-66,56;UBERON:0007135,2.24e-66,56;UBERON:0000073,3.69e-61,53;UBERON:0002616,3.69e-61,53;UBERON:0001017,5.25e-59,81;UBERON:0001016,1.83e-56,89;UBERON:0002780,5.09e-53,41;UBERON:0001890,5.09e-53,41;UBERON:0003080,5.09e-53,41;UBERON:0006240,5.09e-53,41;UBERON:0000955,5.70e-49,68;UBERON:0006238,5.70e-49,68;UBERON:0001869,1.01e-48,32;UBERON:0001893,2.14e-48,34;UBERON:0003528,1.60e-45,34;UBERON:0002020,1.60e-45,34;UBERON:0002791,3.65e-45,32;UBERON:0003075,6.62e-45,82;UBERON:0007284,6.62e-45,82;UBERON:0002346,3.83e-42,86;UBERON:0002619,4.38e-41,22;UBERON:0001950,1.22e-37,20;UBERON:0003056,3.15e-36,61;UBERON:0000956,1.72e-35,25;UBERON:0000203,1.72e-35,25;UBERON:0010371,2.37e-32,104;UBERON:0007023,9.47e-28,114;UBERON:0004121,2.80e-26,171;UBERON:0000924,2.80e-26,171;UBERON:0006601,2.80e-26,171;UBERON:0010314,5.85e-25,132;UBERON:0011216,4.32e-22,223;UBERON:0002420,1.09e-14,9;UBERON:0007245,1.09e-14,9;UBERON:0010009,1.09e-14,9;UBERON:0010011,1.09e-14,9;UBERON:0000454,1.09e-14,9;UBERON:0003076,3.65e-14,15;UBERON:0003057,3.65e-14,15;UBERON:0001871,5.69e-14,6;UBERON:0000200,3.09e-12,6;UBERON:0000125,2.35e-11,9;UBERON:0002308,2.35e-11,9;UBERON:0009663,5.14e-11,7;UBERON:0000349,7.73e-11,5;UBERON:0000025,1.29e-10,192;UBERON:0001872,4.31e-10,5;UBERON:0000369,6.58e-10,4;UBERON:0002435,6.58e-10,4;UBERON:000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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=24141 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16097 | |||
|TSSclassifier=W | |||
|UniProt=Q9UJQ1 | |||
|association_with_transcript=159bp_to_ENST00000427562,uc002wni.1,uc010zrc.1_5end | |||
|coexpression_cluster_id=C1485 | |||
|description=CAGE_peak_2_at_LAMP5_5end | |||
|id=chr20:9495430..9495472,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.61e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.18e-11;82!UBERON:0006241;9.91e-07;3!UBERON:0003057;9.91e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.79e-50!57;UBERON:0005068!2.79e-50!57;UBERON:0006241!2.79e-50!57;UBERON:0007135!2.79e-50!57;UBERON:0001017!5.33e-50!82;UBERON:0005743!2.09e-48!86;UBERON:0000073!4.03e-45!94;UBERON:0001016!4.03e-45!94;UBERON:0007023!1.13e-44!115;UBERON:0002616!2.12e-41!59;UBERON:0000955!6.21e-40!69;UBERON:0006238!6.21e-40!69;UBERON:0002780!1.00e-38!41;UBERON:0001890!1.00e-38!41;UBERON:0006240!1.00e-38!41;UBERON:0003080!1.89e-37!42;UBERON:0003075!2.08e-37!86;UBERON:0007284!2.08e-37!86;UBERON:0002346!9.52e-35!90;UBERON:0001893!1.27e-34!34;UBERON:0002020!1.29e-34!34;UBERON:0003528!1.29e-34!34;UBERON:0002791!1.72e-33!33;UBERON:0001869!2.85e-33!32;UBERON:0002619!1.54e-25!22;UBERON:0003056!3.75e-25!61;UBERON:0000956!3.78e-25!25;UBERON:0000203!3.78e-25!25;UBERON:0000153!7.80e-25!129;UBERON:0007811!7.80e-25!129;UBERON:0004121!1.58e-24!169;UBERON:0000033!1.59e-23!123;UBERON:0001950!1.87e-23!20;UBERON:0000924!2.36e-23!173;UBERON:0006601!2.36e-23!173;UBERON:0003076!1.58e-13!15;UBERON:0003057!1.58e-13!15;UBERON:0002420!3.15e-11!9;UBERON:0007245!3.15e-11!9;UBERON:0010009!3.15e-11!9;UBERON:0010011!3.15e-11!9;UBERON:0000454!3.15e-11!9;UBERON:0002308!7.54e-11!9;UBERON:0000125!7.54e-11!9;UBERON:0004733!1.64e-10!12;UBERON:0002028!1.64e-10!12;UBERON:0007277!1.64e-10!12;UBERON:0001871!4.37e-10!7;UBERON:0004732!1.89e-09!13;UBERON:0004111!2.50e-09!241;UBERON:0009663!5.87e-09!7;UBERON:0000025!6.06e-09!194;UBERON:0000477!8.25e-09!286;UBERON:0000200!4.74e-08!6;UBERON:0002680!2.34e-07!9;UBERON:0001895!2.34e-07!9;UBERON:0010092!2.34e-07!9;UBERON:0002298!3.36e-07!8;UBERON:0000349!3.38e-07!5;UBERON:0001872!9.67e-07!5 | |||
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|short_description=p2@LAMP5 | |||
}} |
Revision as of 09:45, 12 September 2013
Short description: | p2@LAMP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LAMP5_5end |
Coexpression cluster: | C1485_myeloma_putamen_caudate_nucleus_Dendritic_pons_Lymphatic |
Association with transcript: | 159bp_to_ENST00000427562, uc002wni.1, uc010zrc.1_5end |
EntrezGene: | LAMP5 |
HGNC: | 16097 |
UniProt: | Q9UJQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.61e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.