FFCP PHASE1:Hg19::chr5:161275310..161275319,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2554|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4075|TSSclassifier=S|UniProt=P14867|association_with_transcript=-130bp_to_ENST00000437025_5end|coexpression_cluster_id=C3|description=CAGE_peak_9_at_GABRA1_5end|id=chr5:161275310..161275319,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;4.19e-21;3!UBERON:0006601;2.75e-15;82!UBERON:0006222;1.18e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.81e-105!57;UBERON:0005068!4.81e-105!57;UBERON:0006241!4.81e-105!57;UBERON:0007135!4.81e-105!57;UBERON:0002616!4.10e-96!59;UBERON:0000955!2.74e-89!69;UBERON:0006238!2.74e-89!69;UBERON:0002780!5.00e-87!41;UBERON:0001890!5.00e-87!41;UBERON:0006240!5.00e-87!41;UBERON:0002020!4.75e-86!34;UBERON:0003528!4.75e-86!34;UBERON:0001893!4.91e-86!34;UBERON:0001869!2.35e-85!32;UBERON:0003080!7.89e-85!42;UBERON:0002791!4.46e-82!33;UBERON:0001017!4.68e-82!82;UBERON:0005743!9.84e-82!86;UBERON:0000073!7.88e-77!94;UBERON:0001016!7.88e-77!94;UBERON:0002619!3.08e-75!22;UBERON:0003075!1.66e-74!86;UBERON:0007284!1.66e-74!86;UBERON:0002346!7.79e-71!90;UBERON:0001950!1.11e-67!20;UBERON:0000956!6.11e-66!25;UBERON:0000203!6.11e-66!25;UBERON:0007023!2.09e-60!115;UBERON:0003056!2.41e-60!61;UBERON:0000033!3.68e-52!123;UBERON:0000153!7.12e-52!129;UBERON:0007811!7.12e-52!129;UBERON:0004121!2.78e-39!169;UBERON:0000924!3.54e-38!173;UBERON:0006601!3.54e-38!173;UBERON:0000025!3.77e-28!194;UBERON:0000200!2.27e-25!6;UBERON:0002308!5.73e-21!9;UBERON:0000125!5.73e-21!9;UBERON:0002021!6.61e-21!5;UBERON:0004111!6.65e-21!241;UBERON:0002420!6.68e-21!9;UBERON:0007245!6.68e-21!9;UBERON:0010009!6.68e-21!9;UBERON:0010011!6.68e-21!9;UBERON:0000454!6.68e-21!9;UBERON:0001872!7.47e-21!5;UBERON:0004733!8.03e-21!12;UBERON:0002028!8.03e-21!12;UBERON:0007277!8.03e-21!12;UBERON:0003076!1.47e-20!15;UBERON:0003057!1.47e-20!15;UBERON:0000349!3.11e-20!5;UBERON:0004732!4.06e-19!13;UBERON:0000477!1.94e-18!286;UBERON:0001871!4.00e-18!7;UBERON:0000483!2.05e-17!309;UBERON:0000064!2.92e-17!219;UBERON:0000119!3.71e-17!312;UBERON:0002680!2.00e-16!9;UBERON:0001895!2.00e-16!9;UBERON:0010092!2.00e-16!9;UBERON:0000369!2.31e-16!4;UBERON:0002435!2.31e-16!4;UBERON:0000204!2.31e-16!4;UBERON:0010082!2.31e-16!4;UBERON:0009663!3.87e-14!7;UBERON:0000475!2.20e-13!365;UBERON:0002771!2.87e-13!3;UBERON:0000988!1.15e-12!3;UBERON:0005383!1.53e-12!3;UBERON:0005382!1.53e-12!3;UBERON:0002298!3.60e-12!8;UBERON:0001870!5.29e-10!2;UBERON:0000481!2.98e-09!347;UBERON:0001954!3.83e-09!2;UBERON:0003022!3.83e-09!2;UBERON:0002421!3.83e-09!2;UBERON:0002600!3.83e-09!2;UBERON:0002148!4.51e-09!2;UBERON:0009662!4.51e-09!2;UBERON:0001876!5.53e-09!2;UBERON:0001873!8.27e-09!2;UBERON:0010122!8.27e-09!2;UBERON:0000062!2.02e-07!511;UBERON:0002037!3.17e-07!6;UBERON:0006215!3.17e-07!6|ontology_enrichment_uberon_v019=UBERON:0002619;1.32e-97;22!UBERON:0000956;6.37e-86;25!UBERON:0000203;6.37e-86;25!UBERON:0001950;7.94e-86;20!UBERON:0001869;5.41e-78;32!UBERON:0001893;9.85e-75;34!UBERON:0003528;9.89e-74;34!UBERON:0002020;9.89e-74;34!UBERON:0002791;1.57e-71;32!UBERON:0002780;3.13e-50;41!UBERON:0001890;3.13e-50;41!UBERON:0000073;3.42e-45;53!UBERON:0002616;3.42e-45;53!UBERON:0000200;6.87e-39;6!UBERON:0000955;3.39e-34;68!UBERON:0001872;5.05e-32;5!UBERON:0001017;1.47e-29;75!UBERON:0001016;3.86e-22;83!UBERON:0002021;1.88e-21;5!UBERON:0001870;1.18e-20;3!UBERON:0000349;1.98e-20;5!UBERON:0001871;7.70e-15;6!UBERON:0002702;3.00e-14;2!UBERON:0002771;5.99e-14;2!UBERON:0007023;7.72e-14;114!UBERON:0001954;1.27e-13;2!UBERON:0003022;1.27e-13;2!UBERON:0002421;1.27e-13;2!UBERON:0002600;1.27e-13;2!UBERON:0002680;4.14e-12;9!UBERON:0001895;4.14e-12;9!UBERON:0002037;8.15e-11;6!UBERON:0011216;2.80e-10;132!UBERON:0004733;4.14e-09;12!UBERON:0002028;4.14e-09;12!UBERON:0004732;2.05e-08;13!UBERON:0002902;3.80e-08;1!UBERON:0009899;3.80e-08;1!UBERON:0002581;5.51e-08;1!UBERON:0002022;5.51e-08;1!UBERON:0007190;5.51e-08;1!UBERON:0001882;1.18e-07;1!UBERON:0001874;1.18e-07;1!UBERON:0003112;1.18e-07;1!UBERON:0011158;1.18e-07;1!UBERON:0003128;1.18e-07;1!UBERON:0005403;1.18e-07;1!UBERON:0001703;1.18e-07;1!UBERON:0002241;1.18e-07;1!UBERON:0000369;3.03e-07;4!UBERON:0002435;3.03e-07;4!UBERON:0000204;3.03e-07;4!UBERON:0002420;7.40e-07;9!UBERON:0000125;7.40e-07;9!UBERON:0007245;7.40e-07;9!UBERON:0002308;7.40e-07;9!UBERON:0010009;7.40e-07;9!UBERON:0010011;7.40e-07;9!UBERON:0000454;7.40e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.13e-97,22;UBERON:0001869,3.28e-90,32;UBERON:0001950,8.72e-86,20;UBERON:0000956,9.71e-86,25;UBERON:0000203,9.71e-86,25;UBERON:0001893,8.07e-85,34;UBERON:0003528,1.56e-84,34;UBERON:0002020,1.56e-84,34;UBERON:0000073,1.78e-82,53;UBERON:0002616,1.78e-82,53;UBERON:0002791,7.92e-82,32;UBERON:0001049,6.88e-78,56;UBERON:0005068,6.88e-78,56;UBERON:0006241,6.88e-78,56;UBERON:0007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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2554 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4075 | |||
|TSSclassifier=S | |||
|UniProt=P14867 | |||
|association_with_transcript=-130bp_to_ENST00000437025_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_9_at_GABRA1_5end | |||
|id=chr5:161275310..161275319,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.19e-21;3!UBERON:0006601;2.75e-15;82!UBERON:0006222;1.18e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p9@GABRA1 | |||
}} |
Revision as of 14:33, 13 September 2013
Short description: | p9@GABRA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_GABRA1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -130bp_to_ENST00000437025_5end |
EntrezGene: | GABRA1 |
HGNC: | 4075 |
UniProt: | P14867 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.