FFCP PHASE1:Hg19::chr6:32119676..32119728,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80863 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13943 | |||
|TSSclassifier=weak | |||
|UniProt=Q99946 | |||
|association_with_transcript=0bp_to_ENST00000211413,ENST00000472641,ENST00000495191,NM_030651,uc003nzs.2,uc003nzt.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_PRRT1_5end | |||
|id=chr6:32119676..32119728,- | |||
|ontology_enrichment_celltype=CL:0000055!3.85e-10!180;CL:0000057!8.94e-09!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.85e-09,76 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.67e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.08e-42!115;UBERON:0001049!2.79e-32!57;UBERON:0005068!2.79e-32!57;UBERON:0006241!2.79e-32!57;UBERON:0007135!2.79e-32!57;UBERON:0002616!6.78e-29!59;UBERON:0001017!1.49e-28!82;UBERON:0005743!4.37e-27!86;UBERON:0003075!1.36e-26!86;UBERON:0007284!1.36e-26!86;UBERON:0002346!1.39e-26!90;UBERON:0000955!6.78e-26!69;UBERON:0006238!6.78e-26!69;UBERON:0000073!1.53e-25!94;UBERON:0001016!1.53e-25!94;UBERON:0002780!1.58e-25!41;UBERON:0001890!1.58e-25!41;UBERON:0006240!1.58e-25!41;UBERON:0003080!1.88e-25!42;UBERON:0001893!4.67e-21!34;UBERON:0002020!4.96e-21!34;UBERON:0003528!4.96e-21!34;UBERON:0002791!2.20e-20!33;UBERON:0001869!7.19e-20!32;UBERON:0003056!2.42e-19!61;UBERON:0000924!1.80e-18!173;UBERON:0006601!1.80e-18!173;UBERON:0004121!3.75e-18!169;UBERON:0000033!1.38e-17!123;UBERON:0002619!8.40e-17!22;UBERON:0000153!1.08e-16!129;UBERON:0007811!1.08e-16!129;UBERON:0000475!1.34e-16!365;UBERON:0001950!2.14e-15!20;UBERON:0000956!2.44e-15!25;UBERON:0000203!2.44e-15!25;UBERON:0000025!1.25e-14!194;UBERON:0000119!9.35e-14!312;UBERON:0000483!1.21e-13!309;UBERON:0004111!2.93e-13!241;UBERON:0000481!3.99e-13!347;UBERON:0000477!1.11e-12!286;UBERON:0000468!2.14e-10!659;UBERON:0000064!7.84e-09!219;UBERON:0000467!1.88e-08!625;UBERON:0000480!2.86e-08!626;UBERON:0000914!4.48e-08!83;UBERON:0002329!4.48e-08!83;UBERON:0003077!4.48e-08!83;UBERON:0003059!4.48e-08!83;UBERON:0007282!4.48e-08!83;UBERON:0009618!4.48e-08!83;UBERON:0007285!4.48e-08!83;UBERON:0003076!5.51e-08!15;UBERON:0003057!5.51e-08!15;UBERON:0002050!2.41e-07!605;UBERON:0005423!2.41e-07!605;UBERON:0002420!2.53e-07!9;UBERON:0007245!2.53e-07!9;UBERON:0010009!2.53e-07!9;UBERON:0010011!2.53e-07!9;UBERON:0000454!2.53e-07!9;UBERON:0000923!3.10e-07!604;UBERON:0005291!3.10e-07!604;UBERON:0006598!3.10e-07!604;UBERON:0002532!3.10e-07!604;UBERON:0002308!3.55e-07!9;UBERON:0000125!3.55e-07!9;UBERON:0000922!3.82e-07!612;UBERON:0004732!7.48e-07!13;UBERON:0004290!9.24e-07!70;UBERON:0001871!9.35e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.06e-19;41!UBERON:0001890;4.06e-19;41!UBERON:0001893;2.18e-18;34!UBERON:0003528;2.61e-18;34!UBERON:0002020;2.61e-18;34!UBERON:0001869;3.12e-18;32!UBERON:0002619;3.58e-18;22!UBERON:0002791;3.73e-18;32!UBERON:0000073;4.32e-18;53!UBERON:0002616;4.32e-18;53!UBERON:0001950;1.23e-16;20!UBERON:0000956;1.91e-15;25!UBERON:0000203;1.91e-15;25!UBERON:0001017;1.91e-12;75!UBERON:0000955;8.83e-12;68!UBERON:0007023;1.45e-11;114!UBERON:0001016;3.19e-11;83!UBERON:0002420;7.70e-08;9!UBERON:0007245;7.70e-08;9!UBERON:0010009;7.70e-08;9!UBERON:0010011;7.70e-08;9!UBERON:0000454;7.70e-08;9!UBERON:0000125;1.12e-07;9!UBERON:0002308;1.12e-07;9!UBERON:0011216;1.87e-07;132!UBERON:0010314;5.30e-07;132!UBERON:0004732;7.35e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.35e-42,114;UBERON:0001049,4.55e-33,56;UBERON:0005068,4.55e-33,56;UBERON:0006241,4.55e-33,56;UBERON:0007135,4.55e-33,56;UBERON:0000073,4.39e-31,53;UBERON:0002616,4.39e-31,53;UBERON:0001017,1.39e-27,81;UBERON:0002346,3.42e-27,86;UBERON:0003075,4.44e-27,82;UBERON:0007284,4.44e-27,82;UBERON:0010314,1.84e-26,132;UBERON:0001016,2.25e-26,89;UBERON:0002780,2.53e-26,41;UBERON:0001890,2.53e-26,41;UBERON:0003080,2.53e-26,41;UBERON:0006240,2.53e-26,41;UBERON:0000955,2.61e-25,68;UBERON:0006238,2.61e-25,68;UBERON:0001893,1.75e-21,34;UBERON:0003528,1.86e-21,34;UBERON:0002020,1.86e-21,34;UBERON:0010371,2.01e-20,104;UBERON:0001869,3.37e-20,32;UBERON:0002791,4.23e-20,32;UBERON:0003056,3.02e-19,61;UBERON:0004121,7.60e-19,171;UBERON:0000924,7.60e-19,171;UBERON:0006601,7.60e-19,171;UBERON:0002619,3.93e-18,22;UBERON:0001950,1.33e-16,20;UBERON:0011216,1.84e-15,223;UBERON:0000956,2.61e-15,25;UBERON:0000203,2.61e-15,25;UBERON:0004111,1.31e-11,240;UBERON:0000025,1.62e-11,192;UBERON:0000483,4.35e-11,306;UBERON:0000119,5.03e-11,309;UBERON:0000923,5.12e-09,560;UBERON:0010316,5.12e-09,560;UBERON:0005291,5.12e-09,560;UBERON:0006598,5.12e-09,560;UBERON:0010317,5.12e-09,560;UBERON:0002532,5.12e-09,560;UBERON:0002050,1.09e-08,564;UBERON:0000479,1.84e-08,773;UBERON:0003076,5.96e-08,15;UBERON:0003057,5.96e-08,15;UBERON:0002420,7.90e-08,9;UBERON:0007245,7.90e-08,9;UBERON:0010009,7.90e-08,9;UBERON:0010011,7.90e-08,9;UBERON:0000454,7.90e-08,9;UBERON:0005423,1.00e-07,581;UBERON:0000125,1.14e-07,9;UBERON:0002308,1.14e-07,9;UBERON:0000922,7.55e-07,592;UBERON:0004732,9.76e-07,13 | |||
|phase1_expression=1.2717486548939,1.49870366723688,2.39622486963151,1.0007329835313,2.68176656656373,2.61701557230111,0,0.631719873426831,0.783556884599516,0.737201809504527,0,0,0.527533956456907,12.9954670608049,12.5931002776608,0.672325146451775,0,0,2.43966399395253,2.33930010345897,2.04000691244253,0.940364164434263,2.0036519099174,0.684372125364421,0.87879847716362,0,0,0,0.393364276848904,0.767658796194425,0,0.919421224478927,0.30120591877825,0,0,0,0,1.66198622559563,0,0.434021741431704,0,0.971680998056939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,5.11445402295966,3.53709686474248,2.67281948699362,1.33749196312542,3.58514493296949,1.89379122293893,3.89653456815823,0.668462741311041,0.294605907474837,0,0,0.640456598628376,0.130059347559878,0,0.276350017785848,0.869409257205157,9.49034004237187,9.09638815505025,11.4989076185474,0,0,0.34362744548263,0.253019692019503,2.54852331459277,1.30216690771284,1.90090408889675,3.46322773878877,4.47953139040464,0,2.13099526839615,0,2.41928091869679,0.802320587350522,6.22744936696036,24.3806866313962,6.03630773733273,1.79007586580942,7.95166135246046,9.5254203020819,8.40109809972778,0.795285947051099,6.32625331393427,0.567208902984407,0,0.43917392846563,50.1649859156239,1.09288586487763,0.370784442784429,0,0,0,0,0,0,0.79504962946682,0.860234595106124,1.38856200643038,1.13061588384802,1.25849830862972,2.20094433552054,0.626984899610432,0,0,0,0,0.760272105718513,0.976248230192678,0,3.24056779152704,0.625098097988558,1.12264686313085,1.35133776579987,1.53316637465883,0,0.183201743930407,0,0,1.74437620857014,7.9515512271251,3.92554586160197,1.19168262731897,10.8997915884549,1.41867352879343,3.92474320099615,4.2699598291882,0,6.53543174339509,1.21239604862719,0.653847612453835,3.02714855289863,1.72852777344,8.43557154601668,5.93104145977609,6.84566185853339,9.11636951365987,2.93586246609412,4.37056949793955,3.37081936085396,8.16616685019573,3.93069815397658,20.7684820163289,1.18800285728205,3.21447008062124,18.2032272387605,15.090980978141,4.04006673489759,5.00474079487857,4.43302584774693,4.82875382968922,5.51678032438235,5.25833206173089,0.453728732640084,5.38168907066586,6.19316427573846,2.11931901159562,7.20218630602566,5.46178404963726,10.5632621418708,9.49195967291108,2.86919764810153,2.43592512902997,11.6119536152293,8.46859067509154,20.2057571023515,8.16522062788213,4.53384442024381,5.4259389539356,0,0,0,0,0,0.232387885739037,0.725627385107593,0,0.72995471815166,4.69348596989448,3.21620469096443,6.90674606762403,4.64367928031979,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,4.9388881359768,5.88034845542168,0,0,4.72631925345123,0,0,0.171567810298526,0,1.1240175325762,0.201057944823262,1.20364978706088,9.77424915930974,5.19967392639789,0,1.85488647960123,1.05667824812239,0.144366447761074,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,11.8239177095026,1.05658120815871,3.93923419527467,4.03535869567492,2.14612136824846,1.8414389344729,0.381988425558278,5.86087236050235,0,0.514137463516618,0,1.14330573052231,2.35475277125258,1.74384027533312,0.7333828582095,1.16344544182,50.0719024192635,0.845302752556,6.91439103120663,12.4808924293639,1.80045161983499,4.25547396069835,2.39779961114489,5.86209773998405,8.68194568626309,2.46972101034231,1.62868092146868,7.10783897485092,1.58390374586686,0.301439377059586,1.74306691720059,1.99945982364114,0,0,0,17.0133647399024,39.0530581835987,1.42636905040718,0.144781306667579,0.821905290201534,0.358121926479791,0,1.77327684181734,0.431255149719035,1.66845947163673,2.7950408664471,26.0279707715243,4.63973287666617,8.54332953205179,5.10351001322531,0,0,0,19.5079471833432,27.5093786582822,1.89885516589815,11.6463682457252,7.31558854068363,12.4584907876808,11.3627172542932,0.601892199455438,2.27407504055985,1.03473071292505,0.664225598535437,2.94990669666725,9.20966313361678,20.1675192186623,4.46086450954113,2.89475236572042,1.94142780736755,2.02782359826544,0.606255142892519,6.65741758041988,3.32629322662648,1.73675465473144,1.99500565274481,1.12264037773229,5.38184426873944,2.04682899626681,2.89537058058494,2.96836132889982,1.23367755042124,2.66342587969691,3.77784917663522,1.03850885836724,1.62694529843943,0,0,0,7.69256802702865,7.4657378882754,18.22629367936,0.902399225814824,0.539107359730903,1.56869953835371,1.46139224653261,0,0,0.680374821106063,2.37507507712353,7.71136263451447,4.6060894382455,3.51182841698397,0.254876273045038,0,0.671624264166535,0.219259876645935,0.261435451024901,0,0.656029291399411,0,3.50339439602256,0.183138929636687,0,2.87132768998086,3.25030123018261,11.2478750890912,6.38026740728005,2.15668063960502,1.84204409671355,0.689182862422653,3.97454906012612,6.81578461396874,3.15338521439573,4.27353771104339,0.165284915360978,0,0.255225424989168,0,2.32422774648643,3.1481234683064,2.7881490806424,2.46426864140871,3.72614221221915,6.95946393660058,7.78361720236464,0.429374660225974,0.372158369359667,1.58189712359363,0.95315096961912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| |||
|short_description=p1@PRRT1 | |||
}} |
Revision as of 11:11, 22 January 2014
Short description: | p1@PRRT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRRT1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000211413, ENST00000472641, ENST00000495191, NM_030651, uc003nzs.2, uc003nzt.2_5end |
EntrezGene: | PRRT1 |
HGNC: | 13943 |
UniProt: | Q99946 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.85e-09 | 76 |