FFCP PHASE1:Hg19::chr19:10515584..10515599,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1058|description=CAGE_peak_at_chr19:10515584..10515599,+|id=chr19:10515584..10515599,+|ontology_enrichment_celltype=CL:0000990!6.59e-09!8;CL:0000557!7.55e-08!71;CL:0002009!9.04e-08!65;CL:0002057!1.29e-07!42;CL:0000451!6.04e-07!10;CL:0000860!9.44e-07!45|ontology_enrichment_celltype_v019=CL:0001014;3.05e-13;2!CL:0001016;3.05e-13;2!CL:0000840;1.45e-09;5|ontology_enrichment_celltype_v019_2=CL:0001014,2.71e-13,2;CL:0001016,2.71e-13,2;CL:0000840,1.18e-09,5;CL:0001029,1.18e-09,5|ontology_enrichment_development_v019=UBERON:0006215;1.25e-19;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.06e-32!57;UBERON:0005068!5.06e-32!57;UBERON:0006241!5.06e-32!57;UBERON:0007135!5.06e-32!57;UBERON:0002616!1.64e-28!59;UBERON:0002780!1.10e-26!41;UBERON:0001890!1.10e-26!41;UBERON:0006240!1.10e-26!41;UBERON:0003080!8.61e-26!42;UBERON:0000955!6.21e-25!69;UBERON:0006238!6.21e-25!69;UBERON:0001017!1.44e-23!82;UBERON:0005743!6.22e-23!86;UBERON:0001950!3.05e-22!20;UBERON:0002619!5.10e-22!22;UBERON:0001869!1.50e-21!32;UBERON:0002020!2.54e-21!34;UBERON:0003528!2.54e-21!34;UBERON:0001893!3.00e-21!34;UBERON:0003075!8.89e-21!86;UBERON:0007284!8.89e-21!86;UBERON:0000956!1.49e-20!25;UBERON:0000203!1.49e-20!25;UBERON:0000073!3.29e-20!94;UBERON:0001016!3.29e-20!94;UBERON:0002346!3.54e-20!90;UBERON:0002791!3.84e-20!33;UBERON:0003056!8.72e-17!61;UBERON:0000033!7.91e-13!123;UBERON:0000153!3.69e-12!129;UBERON:0007811!3.69e-12!129;UBERON:0007023!1.12e-09!115;UBERON:0001871!9.66e-09!7;UBERON:0004121!2.18e-08!169;UBERON:0000924!2.44e-08!173;UBERON:0006601!2.44e-08!173;UBERON:0001872!5.33e-08!5;UBERON:0002021!7.54e-08!5;UBERON:0003076!1.80e-07!15;UBERON:0003057!1.80e-07!15;UBERON:0001894!6.16e-07!7;UBERON:0006222!6.16e-07!7;UBERON:0001474!6.34e-07!86;UBERON:0002390!7.24e-07!102;UBERON:0003061!7.24e-07!102;UBERON:0002371!7.88e-07!80|ontology_enrichment_uberon_v019=UBERON:0001950;1.41e-37;20!UBERON:0002619;4.13e-34;22!UBERON:0000956;6.53e-30;25!UBERON:0000203;6.53e-30;25!UBERON:0000073;1.37e-21;53!UBERON:0002616;1.37e-21;53!UBERON:0001871;2.02e-20;6!UBERON:0001869;2.36e-20;32!UBERON:0001893;9.98e-20;34!UBERON:0002791;1.10e-19;32!UBERON:0003528;2.24e-19;34!UBERON:0002020;2.24e-19;34!UBERON:0002780;4.18e-18;41!UBERON:0001890;4.18e-18;41!UBERON:0000955;4.00e-17;68!UBERON:0002784;2.21e-14;4!UBERON:0001905;1.25e-13;2!UBERON:0002757;1.25e-13;2!UBERON:0010134;1.25e-13;2!UBERON:0005408;1.25e-13;2!UBERON:0001899;1.25e-13;2!UBERON:0001016;7.92e-13;83!UBERON:0001017;1.11e-12;75!UBERON:0002771;1.63e-12;2!UBERON:0002680;3.45e-11;9!UBERON:0001895;3.45e-11;9!UBERON:0001872;3.62e-11;5!UBERON:0002037;4.63e-10;6!UBERON:0000200;3.27e-09;6!UBERON:0001894;2.03e-08;7!UBERON:0004733;2.07e-08;12!UBERON:0002028;2.07e-08;12!UBERON:0000922;3.80e-08;49!UBERON:0004732;9.09e-08;13!UBERON:0003296;3.16e-07;4!UBERON:0010133;3.16e-07;4!UBERON:0002022;4.33e-07;1!UBERON:0003112;4.33e-07;1!UBERON:0011158;4.33e-07;1!UBERON:0003128;4.33e-07;1!UBERON:0001703;4.33e-07;1!UBERON:0002241;4.33e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0001950,7.32e-38,20;UBERON:0001049,1.58e-37,56;UBERON:0005068,1.58e-37,56;UBERON:0006241,1.58e-37,56;UBERON:0007135,1.58e-37,56;UBERON:0000073,7.82e-36,53;UBERON:0002616,7.82e-36,53;UBERON:0002619,2.27e-34,22;UBERON:0000956,3.86e-30,25;UBERON:0000203,3.86e-30,25;UBERON:0000955,6.21e-30,68;UBERON:0006238,6.21e-30,68;UBERON:0002780,1.38e-28,41;UBERON:0001890,1.38e-28,41;UBERON:0003080,1.38e-28,41;UBERON:0006240,1.38e-28,41;UBERON:0001017,2.79e-27,81;UBERON:0003075,1.90e-24,82;UBERON:0007284,1.90e-24,82;UBERON:0001016,3.52e-24,89;UBERON:0002791,2.95e-23,32;UBERON:0001869,2.95e-23,32;UBERON:0002346,3.95e-23,86;UBERON:0003528,8.53e-22,34;UBERON:0002020,8.53e-22,34;UBERON:0001893,8.53e-22,34;UBERON:0001871,1.05e-20,6;UBERON:0010371,1.93e-18,104;UBERON:0003056,2.32e-18,61;UBERON:0010314,2.79e-15,132;UBERON:0002784,1.58e-14,4;UBERON:0001905,1.30e-13,2;UBERON:0002757,1.30e-13,2;UBERON:0010134,1.30e-13,2;UBERON:0005408,1.30e-13,2;UBERON:0001899,1.30e-13,2;UBERON:0002771,1.64e-12,2;UBERON:0001872,3.50e-11,5;UBERON:0002680,3.79e-11,9;UBERON:0001895,3.79e-11,9;UBERON:0010092,3.79e-11,9;UBERON:0004121,1.05e-10,171;UBERON:0000924,1.05e-10,171;UBERON:0006601,1.05e-10,171;UBERON:0002037,4.71e-10,6;UBERON:0006215,4.71e-10,6;UBERON:0007023,4.99e-10,114;UBERON:0003076,6.07e-10,15;UBERON:0003057,6.07e-10,15;UBERON:0000025,3.72e-09,192;UBERON:0000200,3.88e-09,6;UBERON:0011216,3.98e-09,223;UBERON:0001894,1.68e-08,7;UBERON:0006222,1.68e-08,7;UBERON:0004733,2.22e-08,12;UBERON:0002028,2.22e-08,12;UBERON:0007277,2.22e-08,12;UBERON:0004732,9.69e-08,13;UBERON:0003296,3.21e-07,4;UBERON:0010133,3.21e-07,4;UBERON:0002022,3.41e-07,1;UBERON:0003112,4.34e-07,1;UBERON:0011158,4.34e-07,1;UBERON:000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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1058 | |||
|description=CAGE_peak_at_chr19:10515584..10515599,+ | |||
|id=chr19:10515584..10515599,+ | |||
|ontology_enrichment_celltype=CL:0000990!6.59e-09!8;CL:0000557!7.55e-08!71;CL:0002009!9.04e-08!65;CL:0002057!1.29e-07!42;CL:0000451!6.04e-07!10;CL:0000860!9.44e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0001014;3.05e-13;2!CL:0001016;3.05e-13;2!CL:0000840;1.45e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,2.71e-13,2;CL:0001016,2.71e-13,2;CL:0000840,1.18e-09,5;CL:0001029,1.18e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.25e-19;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr19:10515584..10515599,+ | |||
}} |
Revision as of 18:33, 11 September 2013
Short description: | p@chr19:10515584..10515599, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:10515584..10515599, + |
Coexpression cluster: | C1058_cerebellum_parietal_occipital_pineal_brain_retinoblastoma_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 2.71e-13 | 2 |
immature CD1a-positive Langerhans cell | 2.71e-13 | 2 |
immature conventional dendritic cell | 1.18e-09 | 5 |
common dendritic progenitor | 1.18e-09 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.