FFCP PHASE1:Hg19::chr8:22411813..22411825,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10174|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30907|TSSclassifier=S|UniProt=|association_with_transcript=52bp_to_ENST00000517535_5end|coexpression_cluster_id=C375|description=CAGE_peak_55_at_SORBS3_5end|id=chr8:22411813..22411825,+|ontology_enrichment_celltype=CL:0000149!1.04e-08!4|ontology_enrichment_celltype_v019=CL:0002586;2.74e-12;3!CL:0000149;1.50e-09;4|ontology_enrichment_celltype_v019_2=CL:0002586,2.31e-12,3;CL:0000149,1.32e-09,4|ontology_enrichment_development_v019=UBERON:0005425;1.84e-34;1!UBERON:0003056;1.85e-12;3!UBERON:0006241;2.74e-12;3!UBERON:0003057;2.74e-12;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.48e-63!57;UBERON:0005068!1.48e-63!57;UBERON:0006241!1.48e-63!57;UBERON:0007135!1.48e-63!57;UBERON:0003075!2.66e-53!86;UBERON:0007284!2.66e-53!86;UBERON:0005743!6.63e-53!86;UBERON:0002346!1.56e-50!90;UBERON:0000073!4.79e-50!94;UBERON:0001016!4.79e-50!94;UBERON:0002616!1.06e-49!59;UBERON:0001893!2.21e-48!34;UBERON:0002020!6.47e-48!34;UBERON:0003528!6.47e-48!34;UBERON:0002780!5.68e-47!41;UBERON:0001890!5.68e-47!41;UBERON:0006240!5.68e-47!41;UBERON:0001017!8.57e-47!82;UBERON:0003080!1.00e-45!42;UBERON:0002791!2.27e-45!33;UBERON:0007023!3.14e-45!115;UBERON:0000955!7.55e-44!69;UBERON:0006238!7.55e-44!69;UBERON:0001869!3.31e-42!32;UBERON:0003056!5.96e-41!61;UBERON:0000033!3.00e-34!123;UBERON:0000153!3.76e-34!129;UBERON:0007811!3.76e-34!129;UBERON:0002619!2.93e-31!22;UBERON:0004121!2.24e-30!169;UBERON:0001950!6.66e-30!20;UBERON:0000924!1.89e-29!173;UBERON:0006601!1.89e-29!173;UBERON:0000956!3.19e-27!25;UBERON:0000203!3.19e-27!25;UBERON:0002308!3.54e-24!9;UBERON:0000125!3.54e-24!9;UBERON:0002420!6.40e-19!9;UBERON:0007245!6.40e-19!9;UBERON:0010009!6.40e-19!9;UBERON:0010011!6.40e-19!9;UBERON:0000454!6.40e-19!9;UBERON:0003076!3.14e-18!15;UBERON:0003057!3.14e-18!15;UBERON:0009663!5.82e-18!7;UBERON:0000025!4.03e-16!194;UBERON:0002298!4.46e-16!8;UBERON:0001871!5.81e-16!7;UBERON:0000200!1.01e-14!6;UBERON:0004111!3.37e-13!241;UBERON:0004732!6.55e-13!13;UBERON:0002240!4.84e-12!3;UBERON:0000475!1.17e-11!365;UBERON:0006331!1.38e-11!3;UBERON:0000988!1.78e-11!3;UBERON:0002771!1.91e-11!3;UBERON:0000477!2.95e-11!286;UBERON:0000483!3.33e-11!309;UBERON:0000064!3.91e-11!219;UBERON:0000119!5.31e-11!312;UBERON:0004733!2.74e-10!12;UBERON:0002028!2.74e-10!12;UBERON:0007277!2.74e-10!12;UBERON:0005162!5.67e-09!2;UBERON:0000122!5.67e-09!2;UBERON:0001875!1.80e-08!2;UBERON:0006514!1.80e-08!2;UBERON:0000369!3.41e-08!4;UBERON:0002435!3.41e-08!4;UBERON:0000204!3.41e-08!4;UBERON:0010082!3.41e-08!4;UBERON:0000062!3.93e-08!511;UBERON:0002148!5.10e-08!2;UBERON:0009662!5.10e-08!2;UBERON:0005174!2.27e-07!5;UBERON:0001137!2.27e-07!5;UBERON:0000349!2.74e-07!5;UBERON:0001872!5.70e-07!5;UBERON:0000966!6.59e-07!5;UBERON:0005388!6.59e-07!5;UBERON:0001802!6.59e-07!5;UBERON:0002021!8.77e-07!5|ontology_enrichment_uberon_v019=UBERON:0005162;7.41e-67;2!UBERON:0000122;7.41e-67;2!UBERON:0000941;1.84e-34;1!UBERON:0001785;1.84e-34;1!UBERON:0002464;1.84e-34;1!UBERON:0004904;1.84e-34;1!UBERON:0001021;1.84e-34;1!UBERON:0002336;2.58e-34;1!UBERON:0011215;2.58e-34;1!UBERON:0001018;2.58e-34;1!UBERON:0002473;2.58e-34;1!UBERON:0005340;2.58e-34;1!UBERON:0003544;2.58e-34;1!UBERON:0005970;2.58e-34;1!UBERON:0002316;2.58e-34;1!UBERON:0001020;2.58e-34;1!UBERON:0002437;2.58e-34;1!UBERON:0002038;5.97e-34;1!UBERON:0009661;5.97e-34;1!UBERON:0002950;5.97e-34;1!UBERON:0001891;5.97e-34;1!UBERON:0003714;5.48e-18;2!UBERON:0001876;9.86e-18;2!UBERON:0002420;1.31e-15;9!UBERON:0007245;1.31e-15;9!UBERON:0010009;1.31e-15;9!UBERON:0010011;1.31e-15;9!UBERON:0000454;1.31e-15;9!UBERON:0002240;2.74e-12;3!UBERON:0001781;2.74e-12;3!UBERON:0005174;2.74e-12;3!UBERON:0001782;2.74e-12;3!UBERON:0001137;2.74e-12;3!UBERON:0000966;6.78e-08;5!UBERON:0005388;6.78e-08;5!UBERON:0001802;6.78e-08;5!UBERON:0000349;6.78e-08;5!UBERON:0001893;1.76e-07;34!UBERON:0002780;1.77e-07;41!UBERON:0001890;1.77e-07;41!UBERON:0002104;2.64e-07;21!UBERON:0000073;4.70e-07;53!UBERON:0002616;4.70e-07;53|ontology_enrichment_uberon_v019_2=UBERON:0005162,7.41e-67,2;UBERON:0000122,7.41e-67,2;UBERON:0000941,1.84e-34,1;UBERON:0001785,1.84e-34,1;UBERON:0002464,1.84e-34,1;UBERON:0004904,1.84e-34,1;UBERON:0001021,1.84e-34,1;UBERON:0003902,1.84e-34,1;UBERON:0005425,1.84e-34,1;UBERON:0002336,2.58e-34,1;UBERON:0011215,2.58e-34,1;UBERON:0001018,2.58e-34,1;UBERON:0002473,2.58e-34,1;UBERON:0005340,2.58e-34,1;UBERON:0003544,2.58e-34,1;UBERON:0005970,2.58e-34,1;UBERON:0002316,2.58e-34,1;UBERON:0001020,2.58e-34,1;UBERON:0002437,2.58e-34,1;UBERON:0001781,5.06e-34,4;UBERON:0002038,9.85e-34,1;UBERON:0009661,9.85e-34,1;UBERON:0002950,9.85e-34,1;UBERON:0001891,9.85e-34,1;UBERON:0009616,9.85e-34,1;UBERON:0010286,9.85e-34,1;UBERON:0000966,4.34e-23,6;UBERON:0005388,4.34e-23,6;UBERON:0001802,4.34e-23,6;UBERON:0003714,5.48e-18,2;UBERON:0001876,1.07e-17,2;UBERON:0002420,1.52e-15,9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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10174 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30907 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=52bp_to_ENST00000517535_5end | |||
|coexpression_cluster_id=C375 | |||
|description=CAGE_peak_55_at_SORBS3_5end | |||
|id=chr8:22411813..22411825,+ | |||
|ontology_enrichment_celltype=CL:0000149!1.04e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0002586;2.74e-12;3!CL:0000149;1.50e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,2.31e-12,3;CL:0000149,1.32e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.84e-34;1!UBERON:0003056;1.85e-12;3!UBERON:0006241;2.74e-12;3!UBERON:0003057;2.74e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p55@SORBS3 | |||
}} |
Revision as of 04:37, 14 September 2013
Short description: | p55@SORBS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_55_at_SORBS3_5end |
Coexpression cluster: | C375_optic_Cardiac_occipital_hippocampus_amygdala_heart_vagina |
Association with transcript: | 52bp_to_ENST00000517535_5end |
EntrezGene: | SORBS3 |
HGNC: | 30907 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 2.31e-12 | 3 |
visual pigment cell | 1.32e-09 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.