FFCP PHASE1:Mm9::chr6:144997176..144997190,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12035|HGNC=|MCL_coexpression_id=20|UniProt=F8WIH8|association_with_transcript=141bp_to_ENSMUST00000087468_5end|description=CAGE_peak_17_at_Bcat1_5end|id=chr6:144997176..144997190,-|ontology_enrichment_celltype=CL:0000117!5.38e-17!23;CL:0000337!5.38e-17!23;CL:0000540!4.47e-12!33;CL:0000047!4.47e-12!33;CL:0000031!4.47e-12!33;CL:0000404!4.47e-12!33;CL:0002319!2.76e-09!43;CL:0000393!3.89e-09!39;CL:0000211!3.89e-09!39;CL:0000221!6.55e-09!44;CL:0000133!6.55e-09!44;CL:0000055!5.29e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,6.19e-20,23;CL:0000337,6.19e-20,23;CL:0000540,4.36e-13,33;CL:0000047,4.36e-13,33;CL:0000031,4.36e-13,33;CL:0000404,4.36e-13,33;CL:0000393,1.15e-10,39;CL:0000211,1.15e-10,39;CL:0002614,1.70e-10,3;CL:0002610,1.83e-10,3;CL:0002319,1.97e-09,43;CL:0000221,3.70e-09,44;CL:0000133,3.70e-09,44;CL:0002613,6.83e-09,3;CL:0002611,5.89e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.11e-30!71;UBERON:0003075!1.11e-30!71;UBERON:0007284!1.11e-30!71;UBERON:0000033!1.02e-27!63;UBERON:0001049!9.93e-27!52;UBERON:0005068!9.93e-27!52;UBERON:0006241!9.93e-27!52;UBERON:0007135!9.93e-27!52;UBERON:0001017!7.94e-26!73;UBERON:0005743!7.94e-26!73;UBERON:0000955!4.79e-25!50;UBERON:0006238!4.79e-25!50;UBERON:0004121!8.98e-25!102;UBERON:0000924!8.98e-25!102;UBERON:0006601!8.98e-25!102;UBERON:0000073!1.06e-24!75;UBERON:0001016!1.06e-24!75;UBERON:0002616!6.11e-24!49;UBERON:0002020!1.06e-23!34;UBERON:0003056!3.18e-23!49;UBERON:0002791!1.14e-18!29;UBERON:0003528!1.14e-18!29;UBERON:0001893!1.14e-18!29;UBERON:0003080!5.61e-18!40;UBERON:0002780!6.24e-17!39;UBERON:0001890!6.24e-17!39;UBERON:0006240!6.24e-17!39;UBERON:0007811!3.04e-16!86;UBERON:0000153!1.53e-14!94;UBERON:0000956!8.61e-11!21;UBERON:0001869!8.61e-11!21;UBERON:0000203!8.61e-11!21;UBERON:0002420!9.18e-10!8;UBERON:0007245!9.18e-10!8;UBERON:0010009!9.18e-10!8;UBERON:0010011!9.18e-10!8;UBERON:0000454!9.18e-10!8;UBERON:0003076!1.85e-09!12;UBERON:0003057!1.85e-09!12;UBERON:0002619!2.06e-09!17;UBERON:0002298!1.15e-08!6;UBERON:0002240!1.27e-07!6;UBERON:0005174!1.27e-07!6;UBERON:0001137!1.27e-07!6;UBERON:0000025!5.63e-07!114;UBERON:0002021!8.80e-07!10;UBERON:0000411!8.80e-07!10;UBERON:0001950!8.80e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.40e-31,54;UBERON:0001017,4.06e-28,73;UBERON:0001016,3.12e-27,75;UBERON:0001049,1.44e-26,52;UBERON:0005068,1.44e-26,52;UBERON:0006241,1.44e-26,52;UBERON:0007135,1.44e-26,52;UBERON:0002346,1.07e-22,64;UBERON:0003075,1.07e-22,64;UBERON:0007284,1.07e-22,64;UBERON:0004121,4.12e-22,95;UBERON:0000924,4.12e-22,95;UBERON:0006601,4.12e-22,95;UBERON:0000955,8.04e-22,47;UBERON:0006238,8.04e-22,47;UBERON:0002616,6.63e-20,46;UBERON:0010371,2.62e-19,73;UBERON:0002020,4.88e-19,34;UBERON:0002420,9.49e-18,8;UBERON:0007245,9.49e-18,8;UBERON:0010009,9.49e-18,8;UBERON:0010011,9.49e-18,8;UBERON:0000454,9.49e-18,8;UBERON:0003080,8.76e-16,40;UBERON:0003528,1.29e-14,29;UBERON:0002791,1.29e-14,29;UBERON:0001893,1.29e-14,29;UBERON:0010314,2.53e-14,92;UBERON:0002780,5.13e-14,39;UBERON:0001890,5.13e-14,39;UBERON:0006240,5.13e-14,39;UBERON:0003056,5.87e-14,49;UBERON:0002950,1.91e-13,4;UBERON:0001891,1.91e-13,4;UBERON:0009616,1.91e-13,4;UBERON:0010286,1.91e-13,4;UBERON:0003076,2.86e-12,12;UBERON:0003057,2.86e-12,12;UBERON:0002038,1.70e-10,3;UBERON:0009663,1.70e-10,3;UBERON:0009661,1.70e-10,3;UBERON:0000125,1.70e-10,3;UBERON:0002308,1.70e-10,3;UBERON:0004684,1.83e-10,3;UBERON:0002275,1.83e-10,3;UBERON:0000025,1.46e-09,114;UBERON:0000369,2.80e-09,5;UBERON:0002435,2.80e-09,5;UBERON:0000204,2.80e-09,5;UBERON:0010082,2.80e-09,5;UBERON:0004111,1.27e-08,122;UBERON:0002240,1.50e-08,6;UBERON:0005174,1.50e-08,6;UBERON:0001137,1.50e-08,6;UBERON:0001896,7.42e-08,2;UBERON:0002298,7.42e-08,2;UBERON:0005290,7.42e-08,2;UBERON:0010096,7.42e-08,2;UBERON:0011216,2.90e-07,194;UBERON:0002021,5.10e-07,10;UBERON:0000411,5.10e-07,10;UBERON:0001950,5.10e-07,10;UBERON:0002256,5.89e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,0,0,0,0,0,0,0,0,0,0.405017814995072,0.420649922702764,2.57085885963423,1.54607978666129,0.122490799214954,0.479227355091182,0,4.40463523997555,4.21368215681119,5.68344173048101,1.31886287730194,1.09785172322892,1.04182674111352,5.58365998002762,6.19038871034848,3.36156145108982,0.883885756421003,2.56269025438385,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0,0,0,2.34224637609238,0.83778682725382,0,0,0,0,5.54225365797844,2.28750301409313,0.753926112677186,0.695297280769106,1.02286182932132,2.70124457927428,1.94689515681309,0,0,0,0.420883711772948,0.650602214813519,0,0.720248519221397,0.150704817835715,0.408218994907967,0.384341160854549,0.281105173679186,1.03481348295606,0.431135985865684,0,0,0,0,0,0,0,0,0,0,0.41425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| ||
|EntrezGene=12035 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt=F8WIH8 | |||
|association_with_transcript=141bp_to_ENSMUST00000087468_5end | |||
|description=CAGE_peak_17_at_Bcat1_5end | |||
|id=chr6:144997176..144997190,- | |||
|ontology_enrichment_celltype=CL:0000117!5.38e-17!23;CL:0000337!5.38e-17!23;CL:0000540!4.47e-12!33;CL:0000047!4.47e-12!33;CL:0000031!4.47e-12!33;CL:0000404!4.47e-12!33;CL:0002319!2.76e-09!43;CL:0000393!3.89e-09!39;CL:0000211!3.89e-09!39;CL:0000221!6.55e-09!44;CL:0000133!6.55e-09!44;CL:0000055!5.29e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.19e-20,23;CL:0000337,6.19e-20,23;CL:0000540,4.36e-13,33;CL:0000047,4.36e-13,33;CL:0000031,4.36e-13,33;CL:0000404,4.36e-13,33;CL:0000393,1.15e-10,39;CL:0000211,1.15e-10,39;CL:0002614,1.70e-10,3;CL:0002610,1.83e-10,3;CL:0002319,1.97e-09,43;CL:0000221,3.70e-09,44;CL:0000133,3.70e-09,44;CL:0002613,6.83e-09,3;CL:0002611,5.89e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.11e-30!71;UBERON:0003075!1.11e-30!71;UBERON:0007284!1.11e-30!71;UBERON:0000033!1.02e-27!63;UBERON:0001049!9.93e-27!52;UBERON:0005068!9.93e-27!52;UBERON:0006241!9.93e-27!52;UBERON:0007135!9.93e-27!52;UBERON:0001017!7.94e-26!73;UBERON:0005743!7.94e-26!73;UBERON:0000955!4.79e-25!50;UBERON:0006238!4.79e-25!50;UBERON:0004121!8.98e-25!102;UBERON:0000924!8.98e-25!102;UBERON:0006601!8.98e-25!102;UBERON:0000073!1.06e-24!75;UBERON:0001016!1.06e-24!75;UBERON:0002616!6.11e-24!49;UBERON:0002020!1.06e-23!34;UBERON:0003056!3.18e-23!49;UBERON:0002791!1.14e-18!29;UBERON:0003528!1.14e-18!29;UBERON:0001893!1.14e-18!29;UBERON:0003080!5.61e-18!40;UBERON:0002780!6.24e-17!39;UBERON:0001890!6.24e-17!39;UBERON:0006240!6.24e-17!39;UBERON:0007811!3.04e-16!86;UBERON:0000153!1.53e-14!94;UBERON:0000956!8.61e-11!21;UBERON:0001869!8.61e-11!21;UBERON:0000203!8.61e-11!21;UBERON:0002420!9.18e-10!8;UBERON:0007245!9.18e-10!8;UBERON:0010009!9.18e-10!8;UBERON:0010011!9.18e-10!8;UBERON:0000454!9.18e-10!8;UBERON:0003076!1.85e-09!12;UBERON:0003057!1.85e-09!12;UBERON:0002619!2.06e-09!17;UBERON:0002298!1.15e-08!6;UBERON:0002240!1.27e-07!6;UBERON:0005174!1.27e-07!6;UBERON:0001137!1.27e-07!6;UBERON:0000025!5.63e-07!114;UBERON:0002021!8.80e-07!10;UBERON:0000411!8.80e-07!10;UBERON:0001950!8.80e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.40e-31,54;UBERON:0001017,4.06e-28,73;UBERON:0001016,3.12e-27,75;UBERON:0001049,1.44e-26,52;UBERON:0005068,1.44e-26,52;UBERON:0006241,1.44e-26,52;UBERON:0007135,1.44e-26,52;UBERON:0002346,1.07e-22,64;UBERON:0003075,1.07e-22,64;UBERON:0007284,1.07e-22,64;UBERON:0004121,4.12e-22,95;UBERON:0000924,4.12e-22,95;UBERON:0006601,4.12e-22,95;UBERON:0000955,8.04e-22,47;UBERON:0006238,8.04e-22,47;UBERON:0002616,6.63e-20,46;UBERON:0010371,2.62e-19,73;UBERON:0002020,4.88e-19,34;UBERON:0002420,9.49e-18,8;UBERON:0007245,9.49e-18,8;UBERON:0010009,9.49e-18,8;UBERON:0010011,9.49e-18,8;UBERON:0000454,9.49e-18,8;UBERON:0003080,8.76e-16,40;UBERON:0003528,1.29e-14,29;UBERON:0002791,1.29e-14,29;UBERON:0001893,1.29e-14,29;UBERON:0010314,2.53e-14,92;UBERON:0002780,5.13e-14,39;UBERON:0001890,5.13e-14,39;UBERON:0006240,5.13e-14,39;UBERON:0003056,5.87e-14,49;UBERON:0002950,1.91e-13,4;UBERON:0001891,1.91e-13,4;UBERON:0009616,1.91e-13,4;UBERON:0010286,1.91e-13,4;UBERON:0003076,2.86e-12,12;UBERON:0003057,2.86e-12,12;UBERON:0002038,1.70e-10,3;UBERON:0009663,1.70e-10,3;UBERON:0009661,1.70e-10,3;UBERON:0000125,1.70e-10,3;UBERON:0002308,1.70e-10,3;UBERON:0004684,1.83e-10,3;UBERON:0002275,1.83e-10,3;UBERON:0000025,1.46e-09,114;UBERON:0000369,2.80e-09,5;UBERON:0002435,2.80e-09,5;UBERON:0000204,2.80e-09,5;UBERON:0010082,2.80e-09,5;UBERON:0004111,1.27e-08,122;UBERON:0002240,1.50e-08,6;UBERON:0005174,1.50e-08,6;UBERON:0001137,1.50e-08,6;UBERON:0001896,7.42e-08,2;UBERON:0002298,7.42e-08,2;UBERON:0005290,7.42e-08,2;UBERON:0010096,7.42e-08,2;UBERON:0011216,2.90e-07,194;UBERON:0002021,5.10e-07,10;UBERON:0000411,5.10e-07,10;UBERON:0001950,5.10e-07,10;UBERON:0002256,5.89e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,0,0,0,0,0,0,0,0,0,0.405017814995072,0.420649922702764,2.57085885963423,1.54607978666129,0.122490799214954,0.479227355091182,0,4.40463523997555,4.21368215681119,5.68344173048101,1.31886287730194,1.09785172322892,1.04182674111352,5.58365998002762,6.19038871034848,3.36156145108982,0.883885756421003,2.56269025438385,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0,0,0,2.34224637609238,0.83778682725382,0,0,0,0,5.54225365797844,2.28750301409313,0.753926112677186,0.695297280769106,1.02286182932132,2.70124457927428,1.94689515681309,0,0,0,0.420883711772948,0.650602214813519,0,0.720248519221397,0.150704817835715,0.408218994907967,0.384341160854549,0.281105173679186,1.03481348295606,0.431135985865684,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.99083303931635,6.56385444916338,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,4.17717711348349,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,7.97328798645192,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.655087691238533,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,1.3748254587495,2.05524755931193,0.755393897389701,2.02506750069542,1.35096360967266,0.906284817968409,1.03552062350364,0,0.798049746802062,0,0,0.419226325255965,0.183843508450014,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0.169229215783353,0,0,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p17@Bcat1 | |||
}} |
Revision as of 09:20, 14 September 2013
Short description: | p17@Bcat1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_Bcat1_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 141bp_to_ENSMUST00000087468_5end |
EntrezGene: | Bcat1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.19e-20 | 23 |
neuroblast (sensu Vertebrata) | 6.19e-20 | 23 |
neuron | 4.36e-13 | 33 |
neuronal stem cell | 4.36e-13 | 33 |
neuroblast | 4.36e-13 | 33 |
electrically signaling cell | 4.36e-13 | 33 |
electrically responsive cell | 1.15e-10 | 39 |
electrically active cell | 1.15e-10 | 39 |
neuron of the substantia nigra | 1.70e-10 | 3 |
raphe nuclei neuron | 1.83e-10 | 3 |
neural cell | 1.97e-09 | 43 |
ectodermal cell | 3.70e-09 | 44 |
neurectodermal cell | 3.70e-09 | 44 |
striatum neuron | 6.83e-09 | 3 |
neuron of the dorsal spinal cord | 5.89e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.