FFCP PHASE1:Hg19::chr14:77229052..77229096,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22846 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19964 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=380bp_to_ENST00000554237_5end | |||
|description=CAGE_peak_3_at_VASH1_5end | |||
|id=chr14:77229052..77229096,+ | |||
|ontology_enrichment_celltype=CL:0000115!8.32e-16!35;CL:0002009!1.09e-15!65;CL:0000071!1.83e-15!18;CL:0002546!1.83e-15!18;CL:0002139!1.83e-15!24;CL:0002057!3.70e-15!42;CL:0002194!2.51e-14!63;CL:0000576!2.51e-14!63;CL:0000040!2.51e-14!63;CL:0000559!2.51e-14!63;CL:0000557!5.71e-14!71;CL:0000860!2.44e-13!45;CL:0000839!1.83e-11!70;CL:0002078!4.32e-11!44;CL:0000766!9.97e-11!76;CL:1000413!5.78e-10!9;CL:0000763!2.52e-08!112;CL:0000049!2.52e-08!112;CL:0002544!2.78e-07!6;CL:0002543!2.95e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000071;1.73e-29;18!CL:0002139;2.07e-28;24!CL:0000115;1.58e-27;36!CL:1000413;6.22e-18;9!CL:0002078;2.97e-14;45!CL:0000860;5.74e-14;33!CL:0002057;5.74e-14;33!CL:0002543;9.86e-13;6!CL:0002544;1.18e-12;6!CL:0000473;1.05e-11;39!CL:0000234;1.05e-11;39!CL:0000213;5.09e-11;58!CL:0000215;5.09e-11;58!CL:0000576;1.07e-08;48!CL:0002618;2.53e-07;3!CL:0002188;3.79e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,5.45e-31,36;CL:0000071,2.33e-29,18;CL:0002546,2.33e-29,18;CL:0002139,2.93e-28,24;CL:0002078,4.21e-23,45;CL:1000413,5.72e-18,9;CL:0000473,7.36e-18,48;CL:0000234,7.36e-18,48;CL:0002009,1.36e-17,61;CL:0000557,1.72e-16,67;CL:0000860,2.97e-16,42;CL:0002057,2.97e-16,42;CL:0000213,4.12e-16,58;CL:0000215,4.12e-16,58;CL:0002194,2.16e-15,59;CL:0000576,2.16e-15,59;CL:0000040,2.16e-15,59;CL:0000559,2.16e-15,59;CL:0000839,5.57e-13,66;CL:0002544,9.64e-13,6;CL:0002543,1.08e-12,6;CL:0000766,2.66e-11,72;CL:0000763,1.80e-09,108;CL:0000049,1.80e-09,108;CL:0002618,2.65e-07,3;CL:0002188,4.46e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;1.73e-29;18!CL:0002057;7.04e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.95e-36!115;UBERON:0001049!3.02e-21!57;UBERON:0005068!3.02e-21!57;UBERON:0006241!3.02e-21!57;UBERON:0007135!3.02e-21!57;UBERON:0001017!9.62e-19!82;UBERON:0005743!4.76e-18!86;UBERON:0002616!2.70e-16!59;UBERON:0000073!4.57e-16!94;UBERON:0001016!4.57e-16!94;UBERON:0003081!1.20e-15!216;UBERON:0001986!1.83e-15!18;UBERON:0004638!1.83e-15!18;UBERON:0004852!1.83e-15!18;UBERON:0002780!1.87e-15!41;UBERON:0001890!1.87e-15!41;UBERON:0006240!1.87e-15!41;UBERON:0000955!2.47e-15!69;UBERON:0006238!2.47e-15!69;UBERON:0003080!8.31e-15!42;UBERON:0003075!9.60e-15!86;UBERON:0007284!9.60e-15!86;UBERON:0000025!6.74e-14!194;UBERON:0001893!7.82e-14!34;UBERON:0002020!8.58e-14!34;UBERON:0003528!8.58e-14!34;UBERON:0002346!2.67e-13!90;UBERON:0002791!2.92e-13!33;UBERON:0000922!4.32e-13!612;UBERON:0004111!6.93e-13!241;UBERON:0000467!7.28e-13!625;UBERON:0000480!9.70e-13!626;UBERON:0002193!1.28e-12!112;UBERON:0001869!1.50e-12!32;UBERON:0002050!2.99e-12!605;UBERON:0005423!2.99e-12!605;UBERON:0000468!5.25e-12!659;UBERON:0000923!7.99e-12!604;UBERON:0005291!7.99e-12!604;UBERON:0006598!7.99e-12!604;UBERON:0002532!7.99e-12!604;UBERON:0002390!1.79e-11!102;UBERON:0003061!1.79e-11!102;UBERON:0000487!2.52e-11!22;UBERON:0002619!3.59e-11!22;UBERON:0002371!1.04e-10!80;UBERON:0001950!3.26e-10!20;UBERON:0003915!5.78e-10!9;UBERON:0004700!5.78e-10!9;UBERON:0001917!5.78e-10!9;UBERON:0000477!1.22e-09!286;UBERON:0002405!1.49e-09!115;UBERON:0006914!3.79e-09!25;UBERON:0000956!4.42e-09!25;UBERON:0000203!4.42e-09!25;UBERON:0001474!5.51e-09!86;UBERON:0003056!3.59e-08!61;UBERON:0003076!9.02e-08!15;UBERON:0003057!9.02e-08!15;UBERON:0000153!2.82e-07!129;UBERON:0007811!2.82e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.73e-29;18!UBERON:0001986;1.73e-29;18!UBERON:0004852;1.73e-29;18!UBERON:0000487;3.88e-23;22!UBERON:0006914;1.01e-19;25!UBERON:0003915;6.22e-18;9!UBERON:0004700;6.22e-18;9!UBERON:0001917;6.22e-18;9!UBERON:0000490;1.03e-12;33!UBERON:0001638;3.92e-08;9!UBERON:0003920;3.92e-08;9!UBERON:0004582;3.92e-08;9!UBERON:0004732;1.45e-07;13!UBERON:0002298;2.49e-07;6!UBERON:0000073;5.94e-07;53!UBERON:0002616;5.94e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.33e-29,18;UBERON:0001986,2.33e-29,18;UBERON:0004852,2.33e-29,18;UBERON:0000487,4.94e-23,22;UBERON:0003081,2.90e-20,203;UBERON:0006914,1.25e-19,25;UBERON:0003915,5.72e-18,9;UBERON:0004700,5.72e-18,9;UBERON:0001917,5.72e-18,9;UBERON:0000025,5.69e-14,192;UBERON:0002371,1.46e-13,76;UBERON:0002405,3.55e-13,93;UBERON:0001017,5.80e-13,81;UBERON:0001049,4.19e-12,56;UBERON:0005068,4.19e-12,56;UBERON:0006241,4.19e-12,56;UBERON:0007135,4.19e-12,56;UBERON:0001474,5.57e-12,82;UBERON:0001016,6.60e-12,89;UBERON:0002193,6.06e-11,108;UBERON:0002050,9.03e-11,564;UBERON:0000923,1.96e-10,560;UBERON:0010316,1.96e-10,560;UBERON:0005291,1.96e-10,560;UBERON:0006598,1.96e-10,560;UBERON:0010317,1.96e-10,560;UBERON:0002532,1.96e-10,560;UBERON:0002390,2.23e-10,98;UBERON:0003061,2.23e-10,98;UBERON:0005423,2.70e-10,581;UBERON:0004765,3.21e-10,90;UBERON:0000922,3.52e-10,592;UBERON:0000055,3.92e-10,68;UBERON:0004111,4.51e-10,240;UBERON:0003075,7.61e-10,82;UBERON:0007284,7.61e-10,82;UBERON:0003076,9.40e-10,15;UBERON:0003057,9.40e-10,15;UBERON:0000073,1.23e-09,53;UBERON:0002616,1.23e-09,53;UBERON:0004872,1.40e-09,83;UBERON:0007500,1.69e-09,59;UBERON:0001981,1.69e-09,59;UBERON:0004537,1.69e-09,59;UBERON:0006965,1.69e-09,59;UBERON:0002346,4.63e-09,86;UBERON:0000955,5.31e-09,68;UBERON:0006238,5.31e-09,68;UBERON:0001434,1.91e-08,100;UBERON:0001638,4.16e-08,9;UBERON:0003920,4.16e-08,9;UBERON:0004582,4.16e-08,9;UBERON:0002049,5.11e-08,78;UBERON:0007798,5.11e-08,78;UBERON:0000926,8.75e-08,315;UBERON:0004120,8.75e-08,315;UBERON:0006603,8.75e-08,315;UBERON:0001009,9.57e-08,112;UBERON:0004732,1.21e-07,13;UBERON:0004535,1.62e-07,109;UBERON:0002298,1.87e-07,6;UBERON:0003914,7.08e-07,117 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0.393364276848904,0,0.619264493264304,0,0,0,0,0,0,1.66198622559563,0.401088894940283,0.217010870715852,0,0,0.515151135268373,1.74477886535478,12.4699061417307,5.82201746850759,0.232429036905685,6.98985409637104,3.40677007984614,0,1.7931249457037,0.709446689665756,0,0.645484683583826,0,2.63539275359647,7.09555990150399,3.82029923556644,1.53041946185451,6.73950956859797,3.83602275479425,0,2.39356389145958,4.68847225585964,0.290209238628584,1.70215567407342,1.24564449799115,0.502497330513487,4.17186334736161,0,0,1.47311054395026,0.632924774881769,0.211255286311942,0.425208599930087,0.838634582033504,0,0,0,1.99508920618874,1.79025009479181,3.47061892152804,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0,0,0,0,0,0,0.443067789167242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,1.34140171940727,0.511450247374121,0,0,0,0,0,0,0,0.175669571386252,1.0478326039817,0,0,0,1.56716763569341,2.26028532882071,0.238490624305342,0,0.371457501329565,6.75792185046797,4.30117297553062,21.8698516012784,3.95715559346807,6.29249154314859,3.57653454522088,3.34391946458897,1.55050055501597,1.06729878806013,1.67360306382335,1.20848795132744,0,1.46437234528902,3.67663080345869,6.48113558305408,8.03697554556718,6.06229306090659,4.61707069981621,3.06633274931766,6.6448596169769,4.76324534219059,0,0,0,0,0,0,0,0,1.68203280042692,0,0.24666754841716,0.622422070799533,0.404132016209064,2.45192854670188,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0.910161361938026,0,0.168336113954066,0,0,0,0,0,0.453728732640084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42893272774789,4.20725321410337,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0,0,0,0.492434012174795,0.936017060556951,2.52672975890838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0,0.336393253036082,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0.977208552881205,0,0,0,0,0,0,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,3.90419561572865,3.09315525111078,2.01019518401218,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2360045663807,3.40187410553031,3.02282282542995,10.7959076883203,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0.096670718292122,0,0.307007349452259,0,0.107420244868274,0,0.170453254832202,0.356128142586949,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,1.70894156152249,0.238231775457789,0.822724546172388,0.648473311192717,0,0.79312517629427,0,0.962479855263359,0,0,0,0,0,0,0,4.02179807175377,1.29848776109822,0,0,0,0,0,0,0,0.851692475380653,0,0.307240764308458,0.223676107892416,0,0,0.278406173895242,0,1.6227340708559,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0.796991953004279,1.10513566212459,0,0,0,0,0,0,0,0.394573622547734,0,0,2.90799823828566,0.463840490809256,3.99227596002388,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,1.43753037910592,1.47773809476774,0.658156191461918,0,0,0.230850775511391,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0.104421949505455,2.83084758518844,0.802577647298789,3.04543779442941,0,0,0,0.394584402849391,0,3.97894590119637,0.947798694427319,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,1.58186518546373,0,0,0.886351143382302,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,2.19048606227189,1.27746588066972,0,0.262887354279314,1.67569440763353,0.916641696046735,6.46085722119133,0.199679000498991,1.28767814440971,0.669514372325618,1.20930250476107,0,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0,0,0,2.92466059016951,5.41661368190565,1.21499113316049,0,0.551639951094387,0.367182116944987,0,0,0,0,1.32418394073086,2.034148301238,0,0,0,0,0.574647645245373,0,0,0,0,2.84422503995411,0.92562821219883,0,0,0.320362237703084,0.471612915298998,0.828478110694391,0,0,0,0,0,0.5013797880454,0,0,0,0.886068179966986,0.610131324509816,0.751145584238999,1.72022758707021,1.44207766997908,2.54595252059672,8.30091809617385,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.691292180758654,0,0.531459361253452,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.770750701157514,0,0.638535436228605,0.82046545696302,2.7727886584389,0.899044282034833,0.968853873791107,4.28308260777463,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,1.08060135389431,0.781078098613847,0.413373593002368,1.01465296310251,1.64092442705466,0,0.9924223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| |||
|short_description=p3@VASH1 | |||
}} |
Revision as of 21:10, 11 January 2014
Short description: | p3@VASH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VASH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 380bp_to_ENST00000554237_5end |
EntrezGene: | VASH1 |
HGNC: | 19964 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.45e-31 | 36 |
blood vessel endothelial cell | 2.33e-29 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.33e-29 | 18 |
endothelial cell of vascular tree | 2.93e-28 | 24 |
meso-epithelial cell | 4.21e-23 | 45 |
endothelial cell of artery | 5.72e-18 | 9 |
defensive cell | 7.36e-18 | 48 |
phagocyte | 7.36e-18 | 48 |
macrophage dendritic cell progenitor | 1.36e-17 | 61 |
granulocyte monocyte progenitor cell | 1.72e-16 | 67 |
classical monocyte | 2.97e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.97e-16 | 42 |
lining cell | 4.12e-16 | 58 |
barrier cell | 4.12e-16 | 58 |
monopoietic cell | 2.16e-15 | 59 |
monocyte | 2.16e-15 | 59 |
monoblast | 2.16e-15 | 59 |
promonocyte | 2.16e-15 | 59 |
myeloid lineage restricted progenitor cell | 5.57e-13 | 66 |
aortic endothelial cell | 9.64e-13 | 6 |
vein endothelial cell | 1.08e-12 | 6 |
myeloid leukocyte | 2.66e-11 | 72 |
myeloid cell | 1.80e-09 | 108 |
common myeloid progenitor | 1.80e-09 | 108 |
endothelial cell of umbilical vein | 2.65e-07 | 3 |
glomerular endothelial cell | 4.46e-07 | 5 |