FFCP PHASE1:Hg19::chr17:7833111..7833187,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9196 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6230 | |||
|TSSclassifier=weak | |||
|UniProt=O43448 | |||
|association_with_transcript=-358bp_to_ENST00000303790,NM_004732,uc002gjm.1,uc010vul.1_5end | |||
|coexpression_cluster_id=C3696 | |||
|description=CAGE_peak_1_at_KCNAB3_5end | |||
|id=chr17:7833111..7833187,- | |||
|ontology_enrichment_celltype=CL:0000055!1.04e-12!180;CL:0000133!1.88e-12!59;CL:0000221!1.17e-09!71;CL:0000333!1.23e-08!41 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.55e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,3.26e-11,59;CL:0000333,3.09e-08,41;CL:0000221,1.77e-07,72;CL:0002319,2.38e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.92e-09;82 | |||
|ontology_enrichment_disease=DOID:171!5.39e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;6.84e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,7.10e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!8.05e-42!94;UBERON:0001016!8.05e-42!94;UBERON:0005743!5.69e-38!86;UBERON:0001017!6.32e-37!82;UBERON:0000924!1.03e-36!173;UBERON:0006601!1.03e-36!173;UBERON:0002346!5.50e-35!90;UBERON:0004121!4.76e-34!169;UBERON:0001049!1.17e-33!57;UBERON:0005068!1.17e-33!57;UBERON:0006241!1.17e-33!57;UBERON:0007135!1.17e-33!57;UBERON:0003075!4.48e-32!86;UBERON:0007284!4.48e-32!86;UBERON:0002616!5.58e-32!59;UBERON:0000955!9.45e-31!69;UBERON:0006238!9.45e-31!69;UBERON:0003056!1.54e-26!61;UBERON:0000033!7.30e-26!123;UBERON:0002780!1.89e-25!41;UBERON:0001890!1.89e-25!41;UBERON:0006240!1.89e-25!41;UBERON:0000153!2.56e-25!129;UBERON:0007811!2.56e-25!129;UBERON:0003080!2.86e-25!42;UBERON:0002020!1.88e-22!34;UBERON:0003528!1.88e-22!34;UBERON:0001893!2.79e-22!34;UBERON:0001869!7.40e-22!32;UBERON:0002791!1.38e-21!33;UBERON:0000956!2.07e-18!25;UBERON:0000203!2.07e-18!25;UBERON:0002619!5.08e-17!22;UBERON:0001950!7.70e-16!20;UBERON:0000475!1.79e-15!365;UBERON:0007023!3.21e-14!115;UBERON:0000119!5.00e-13!312;UBERON:0000483!1.78e-12!309;UBERON:0000481!2.53e-12!347;UBERON:0000064!3.88e-11!219;UBERON:0003076!2.02e-09!15;UBERON:0003057!2.02e-09!15;UBERON:0000468!3.87e-09!659;UBERON:0000922!5.14e-09!612;UBERON:0000025!3.59e-08!194;UBERON:0000477!4.02e-08!286;UBERON:0004732!8.46e-08!13;UBERON:0004733!9.91e-08!12;UBERON:0002028!9.91e-08!12;UBERON:0007277!9.91e-08!12;UBERON:0002050!1.44e-07!605;UBERON:0005423!1.44e-07!605;UBERON:0000923!2.70e-07!604;UBERON:0005291!2.70e-07!604;UBERON:0006598!2.70e-07!604;UBERON:0002532!2.70e-07!604;UBERON:0004111!9.89e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;7.22e-25;32!UBERON:0003528;3.19e-24;34!UBERON:0002020;3.19e-24;34!UBERON:0002791;4.10e-24;32!UBERON:0001893;5.24e-24;34!UBERON:0000956;4.14e-23;25!UBERON:0000203;4.14e-23;25!UBERON:0002780;8.02e-23;41!UBERON:0001890;8.02e-23;41!UBERON:0000073;4.17e-22;53!UBERON:0002616;4.17e-22;53!UBERON:0002619;2.80e-21;22!UBERON:0001950;9.03e-20;20!UBERON:0001017;3.19e-17;75!UBERON:0000955;2.27e-16;68!UBERON:0001016;3.32e-16;83!UBERON:0011216;1.21e-09;132!UBERON:0004732;1.35e-08;13!UBERON:0004733;1.74e-08;12!UBERON:0002028;1.74e-08;12!UBERON:0000200;5.34e-07;6!UBERON:0001871;5.49e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.59e-48,89;UBERON:0001017,4.33e-44,81;UBERON:0001049,1.06e-41,56;UBERON:0005068,1.06e-41,56;UBERON:0006241,1.06e-41,56;UBERON:0007135,1.06e-41,56;UBERON:0002346,1.34e-39,86;UBERON:0000073,2.27e-39,53;UBERON:0002616,2.27e-39,53;UBERON:0004121,6.19e-38,171;UBERON:0000924,6.19e-38,171;UBERON:0006601,6.19e-38,171;UBERON:0000955,4.20e-37,68;UBERON:0006238,4.20e-37,68;UBERON:0003075,5.68e-36,82;UBERON:0007284,5.68e-36,82;UBERON:0002780,4.31e-32,41;UBERON:0001890,4.31e-32,41;UBERON:0003080,4.31e-32,41;UBERON:0006240,4.31e-32,41;UBERON:0003056,2.38e-31,61;UBERON:0010371,1.12e-28,104;UBERON:0003528,2.97e-28,34;UBERON:0002020,2.97e-28,34;UBERON:0001893,4.93e-28,34;UBERON:0001869,1.71e-27,32;UBERON:0002791,9.40e-27,32;UBERON:0010314,1.25e-25,132;UBERON:0011216,3.76e-23,223;UBERON:0000956,4.42e-23,25;UBERON:0000203,4.42e-23,25;UBERON:0002619,2.64e-21,22;UBERON:0001950,8.54e-20,20;UBERON:0007023,1.02e-13,114;UBERON:0000119,8.59e-12,309;UBERON:0000483,1.80e-11,306;UBERON:0003076,1.43e-10,15;UBERON:0003057,1.43e-10,15;UBERON:0000922,4.58e-09,592;UBERON:0004732,1.51e-08,13;UBERON:0004733,1.98e-08,12;UBERON:0002028,1.98e-08,12;UBERON:0007277,1.98e-08,12;UBERON:0000923,3.40e-08,560;UBERON:0010316,3.40e-08,560;UBERON:0005291,3.40e-08,560;UBERON:0006598,3.40e-08,560;UBERON:0010317,3.40e-08,560;UBERON:0002532,3.40e-08,560;UBERON:0002050,3.42e-08,564;UBERON:0000025,5.15e-08,192;UBERON:0005423,6.80e-08,581;UBERON:0001871,4.97e-07,6;UBERON:0000200,5.40e-07,6;UBERON:0002420,8.63e-07,9;UBERON:0007245,8.63e-07,9;UBERON:0010009,8.63e-07,9;UBERON:0010011,8.63e-07,9;UBERON:0000454,8.63e-07,9;UBERON:0000125,9.93e-07,9;UBERON:0002308,9.93e-07,9 | |||
|phase1_expression=0,0,0.563817616383885,0,0,0,2.53299878168311,1.26343974685366,0,2.45733936501509,1.39560233594486,0.655324116390517,0.791300934685361,2.35156070624089,1.32558950291166,0,0,0.730310090387373,0,5.66356867153224,3.26401105990805,0.940364164434263,5.43848375549008,5.06435372769671,7.15593045690376,0,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0,0.263384084775077,0.196709770113833,0,0.411202997999018,0.501559486172034,0.32592226663359,0,0,0.445641827540694,0.589211814949674,0,0.541607727530031,0.768547918354051,0.390178042679635,0.164437904603676,0.276350017785848,0.579606171470105,0.14828656316206,0.267540828089713,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,4.87613732627923,0,0.12786256184353,1.44575660953827,0.50133791063589,0.289693037921647,0.795285947051099,1.45990461090791,2.83604451492204,2.4390233720882,2.3715392137144,6.41797469938792,0,0.370784442784429,0,0,0.132957960518865,0.953962497221368,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.803697554556718,0.673588117878509,1.12611480483322,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,1.8672662123986,0.269421344139376,1.14423332179421,3.32986340818849,0.576175924479999,6.7953215231801,1.5608003841516,0,0.298897361103602,3.52303495931295,3.0755859429945,4.49442581447195,1.42907919878425,2.57952066354713,2.47981874821837,3.56400857184616,0.494533858557114,1.82032272387605,2.15585442544872,3.36672227908132,5.25497783462249,1.10825646193673,1.31693286264251,0,1.50238058906597,0.340296549480063,2.33206526395521,1.70845911054854,1.90738711043606,1.80054657650641,1.44273540933814,1.03056216018252,0.744467425326359,0.168776332241266,0,1.00973509697646,2.39329736469978,5.81925804547723,0.710019185033229,0.503760491138201,2.54340888465731,0,0.272746120590835,0,1.58565817968474,1.72288698817931,2.5562667431294,2.07322110030741,1.26160425437814,2.91981887260664,3.12899064659632,1.92972281457866,1.38134921352481,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,3.2925920906512,4.41026134156626,0,0,0,0,0,0.857839051492628,0.439001141634502,0,0.100528972411631,1.29623823221941,2.6064664424826,3.11980435583874,0,4.9850074139283,1.17408694235822,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0.952468414382536,2.67391897890794,1.17217447210047,1.71072446022705,1.33675740514321,1.20137223137567,0,3.25180144601546,0.87192013766656,1.6134422880609,2.32689088364,0,0,1.06375246633948,1.04007436911366,2.57207374262142,5.67396528093113,2.66422179016099,5.00422977803516,39.0687555881839,6.58592269424615,2.28015329005615,3.909311436168,0.791951872933429,0,0.871533458600294,0.399891964728228,0,0,0,0.239624855491583,2.29723871668228,1.42636905040718,0,0.410952645100767,0,0,0,0,0.128343036279748,5.59008173289419,10.4111883086097,6.18631050222156,7.53823194004569,16.5864075429822,0,0,0,3.18997878469764,3.50119364741774,2.17012018959788,0.831883446123229,0.892144943985809,0.946214490203608,1.87426263988341,0.300946099727719,2.27407504055985,2.0694614258501,1.32845119707087,1.65932251687533,2.69339204851057,6.2656370388077,4.11772108573027,0,0.215714200818617,0,0.303127571446259,1.66435439510497,0.30239029332968,0,0.306923946576125,0.841980283299221,0.128139149255701,0,0.482561763430822,1.48418066444991,2.92998418225046,0.887808626565635,3.20295908453856,3.11552657510173,1.04589340613963,0,0,0,0.459257792658427,0.910455840033585,1.04899531967539,1.35359883872224,0.231046011313244,1.56869953835371,1.46139224653261,0.633309773357254,0,0.510281115829547,1.0795795805107,0,2.16757150035082,1.50506932156456,0.764628819135115,0,1.56712328305525,0,0,0.769350375349168,5.9042636225947,0.650756789328606,0,7.6002655799225,9.48859249086762,0.574265537996172,0,0,2.03008508413456,2.00263202249038,2.30255512089194,4.41077031950498,2.57808587683857,2.61030049045611,2.47157219506693,0.890320356467374,0,0.192190067365106,0.382838137483752,0,1.39453664789186,1.25924938732256,1.3940745403212,0,0,0,0,0.286249773483982,1.48863347743867,1.2655176988749,0.571890581771475,1.535386747868,1.28381696410176,3.5002357271853,0,2.15846949099978,2.19629623788844,1.7671860351853,0.606547444719948,0,0,5.85160486907508,0.487426979262569,0,4.36799716505554,0.848432591722276,0,2.75682671773062,0,0,1.73632660280006,1.9676842561399,1.01455188481352,0.30982349809975,1.40847801266121,3.58528380510129,0.589494246078727,1.07001315444375,2.12856638442359,0.211107635297664,0.987884678879706,6.83051712778287,7.34862912514464,0.192444225451024,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,10.387383334304,0,7.49303481825465,0.399158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,14.9122147164945,9.98752856514641,0,0,0,1.394735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| |||
|short_description=p1@KCNAB3 | |||
}} |
Revision as of 13:44, 20 January 2014
Short description: | p1@KCNAB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNAB3_5end |
Coexpression cluster: | C3696_cerebellum_occipital_carcinoid_neuroectodermal_parietal_neuroepithelioma_medial |
Association with transcript: | -358bp_to_ENST00000303790, NM_004732, uc002gjm.1, uc010vul.1_5end |
EntrezGene: | KCNAB3 |
HGNC: | 6230 |
UniProt: | O43448 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 3.26e-11 | 59 |
migratory neural crest cell | 3.09e-08 | 41 |
ectodermal cell | 1.77e-07 | 72 |
neural cell | 2.38e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 7.10e-08 | 10 |