FFCP PHASE1:Hg19::chr2:31043402..31043413,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=92291 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16663 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000465960_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_CAPN13_5end | |||
|id=chr2:31043402..31043413,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;4.76e-13;1!UBERON:0006601;2.18e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.85e-101!57;UBERON:0005068!5.85e-101!57;UBERON:0006241!5.85e-101!57;UBERON:0007135!5.85e-101!57;UBERON:0002616!1.36e-86!59;UBERON:0002780!1.44e-84!41;UBERON:0001890!1.44e-84!41;UBERON:0006240!1.44e-84!41;UBERON:0003080!1.86e-82!42;UBERON:0000955!1.09e-81!69;UBERON:0006238!1.09e-81!69;UBERON:0001893!1.34e-80!34;UBERON:0001017!2.07e-80!82;UBERON:0002020!2.51e-80!34;UBERON:0003528!2.51e-80!34;UBERON:0002791!1.89e-76!33;UBERON:0005743!2.02e-76!86;UBERON:0001869!8.29e-72!32;UBERON:0003075!7.50e-69!86;UBERON:0007284!7.50e-69!86;UBERON:0000073!1.20e-68!94;UBERON:0001016!1.20e-68!94;UBERON:0002346!1.66e-65!90;UBERON:0007023!6.40e-57!115;UBERON:0002619!1.80e-56!22;UBERON:0003056!2.85e-55!61;UBERON:0001950!4.29e-55!20;UBERON:0000956!1.66e-49!25;UBERON:0000203!1.66e-49!25;UBERON:0000153!3.06e-46!129;UBERON:0007811!3.06e-46!129;UBERON:0000033!4.34e-46!123;UBERON:0004121!1.84e-35!169;UBERON:0000924!1.75e-34!173;UBERON:0006601!1.75e-34!173;UBERON:0002420!1.34e-33!9;UBERON:0007245!1.34e-33!9;UBERON:0010009!1.34e-33!9;UBERON:0010011!1.34e-33!9;UBERON:0000454!1.34e-33!9;UBERON:0002308!2.25e-33!9;UBERON:0000125!2.25e-33!9;UBERON:0002298!7.65e-29!8;UBERON:0000025!6.54e-25!194;UBERON:0009663!1.26e-24!7;UBERON:0001871!2.35e-21!7;UBERON:0000200!1.51e-19!6;UBERON:0003076!4.22e-19!15;UBERON:0003057!4.22e-19!15;UBERON:0004111!1.25e-18!241;UBERON:0000477!7.25e-17!286;UBERON:0001872!4.45e-16!5;UBERON:0000349!7.08e-16!5;UBERON:0000988!3.19e-15!3;UBERON:0006331!3.35e-15!3;UBERON:0002021!3.77e-15!5;UBERON:0001896!4.48e-15!3;UBERON:0005290!4.48e-15!3;UBERON:0010096!4.48e-15!3;UBERON:0000483!5.21e-15!309;UBERON:0000119!8.60e-15!312;UBERON:0002771!9.20e-15!3;UBERON:0000064!2.88e-14!219;UBERON:0004733!5.51e-14!12;UBERON:0002028!5.51e-14!12;UBERON:0007277!5.51e-14!12;UBERON:0000475!1.58e-13!365;UBERON:0004732!7.28e-13!13;UBERON:0000369!2.19e-11!4;UBERON:0002435!2.19e-11!4;UBERON:0000204!2.19e-11!4;UBERON:0010082!2.19e-11!4;UBERON:0001897!2.34e-11!2;UBERON:0001875!5.21e-11!2;UBERON:0006514!5.21e-11!2;UBERON:0001876!7.01e-11!2;UBERON:0002148!1.26e-10!2;UBERON:0009662!1.26e-10!2;UBERON:0000062!4.49e-08!511;UBERON:0005383!3.65e-07!3;UBERON:0005382!3.65e-07!3;UBERON:0001894!4.02e-07!7;UBERON:0006222!4.02e-07!7;UBERON:0002240!5.31e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.88e-29;41!UBERON:0001890;5.88e-29;41!UBERON:0000073;5.01e-27;53!UBERON:0002616;5.01e-27;53!UBERON:0003528;7.57e-25;34!UBERON:0002020;7.57e-25;34!UBERON:0001897;2.62e-24;2!UBERON:0010225;2.62e-24;2!UBERON:0001893;3.38e-23;34!UBERON:0002420;5.10e-21;9!UBERON:0000125;5.10e-21;9!UBERON:0007245;5.10e-21;9!UBERON:0002308;5.10e-21;9!UBERON:0010009;5.10e-21;9!UBERON:0010011;5.10e-21;9!UBERON:0000454;5.10e-21;9!UBERON:0002791;9.91e-20;32!UBERON:0002298;3.94e-18;6!UBERON:0000988;1.48e-16;3!UBERON:0000955;8.60e-16;68!UBERON:0001869;1.11e-15;32!UBERON:0001894;1.24e-15;7!UBERON:0009663;1.24e-15;7!UBERON:0001016;4.94e-14;83!UBERON:0001950;5.79e-14;20!UBERON:0002336;1.71e-13;1!UBERON:0011215;1.71e-13;1!UBERON:0001018;1.71e-13;1!UBERON:0002473;1.71e-13;1!UBERON:0005340;1.71e-13;1!UBERON:0003544;1.71e-13;1!UBERON:0005970;1.71e-13;1!UBERON:0002316;1.71e-13;1!UBERON:0001020;1.71e-13;1!UBERON:0002437;1.71e-13;1!UBERON:0001017;3.07e-13;75!UBERON:0001882;4.76e-13;1!UBERON:0002038;4.76e-13;1!UBERON:0003112;4.76e-13;1!UBERON:0011158;4.76e-13;1!UBERON:0009661;4.76e-13;1!UBERON:0002950;4.76e-13;1!UBERON:0003128;4.76e-13;1!UBERON:0005403;4.76e-13;1!UBERON:0001891;4.76e-13;1!UBERON:0001703;4.76e-13;1!UBERON:0002241;4.76e-13;1!UBERON:0002619;9.56e-13;22!UBERON:0007023;9.78e-13;114!UBERON:0002784;1.16e-12;4!UBERON:0000956;2.87e-11;25!UBERON:0000203;2.87e-11;25!UBERON:0001872;1.73e-10;5!UBERON:0000349;2.58e-10;5!UBERON:0004733;2.32e-09;12!UBERON:0002028;2.32e-09;12!UBERON:0004732;1.11e-08;13!UBERON:0001871;1.29e-07;6!UBERON:0005162;2.21e-07;2!UBERON:0000122;2.21e-07;2!UBERON:0001876;3.69e-07;2!UBERON:0002148;3.69e-07;2!UBERON:0001875;3.69e-07;2!UBERON:0006331;3.69e-07;2!UBERON:0009662;3.69e-07;2!UBERON:0006514;3.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.87e-47,53;UBERON:0002616,8.87e-47,53;UBERON:0001049,3.14e-44,56;UBERON:0005068,3.14e-44,56;UBERON:0006241,3.14e-44,56;UBERON:0007135,3.14e-44,56;UBERON:0000955,7.58e-41,68;UBERON:0006238,7.58e-41,68;UBERON:0002780,1.52e-38,41;UBERON:0001890,1.52e-38,41;UBERON:0003080,1.52e-38,41;UBERON:0006240,1.52e-38,41;UBERON:0001017,3.56e-34,81;UBERON:0001016,1.17e-30,89;UBERON:0003075,7.74e-30,82;UBERON:0007284,7.74e-30,82;UBERON:0002346,2.20e-28,86;UBERON:0007023,1.03e-27,114;UBERON:0001893,4.90e-26,34;UBERON:0003528,6.42e-26,34;UBERON:0002020,6.42e-26,34;UBERON:0003056,1.20e-25,61;UBERON:0001897,1.02e-24,2;UBERON:0010225,1.02e-24,2;UBERON:0010371,3.27e-23,104;UBERON:0002791,8.64e-22,32;UBERON:0002420,5.39e-21,9;UBERON:0007245,5.39e-21,9;UBERON:0010009,5.39e-21,9;UBERON:0010011,5.39e-21,9;UBERON:0000454,5.39e-21,9;UBERON:0000125,7.75e-21,9;UBERON:0002308,7.75e-21,9;UBERON:0010314,1.38e-20,132;UBERON:0002298,4.20e-18,6;UBERON:0001869,7.98e-17,32;UBERON:0000988,2.38e-16,3;UBERON:0001894,8.74e-16,7;UBERON:0006222,8.74e-16,7;UBERON:0009663,1.85e-15,7;UBERON:0004121,2.57e-15,171;UBERON:0000924,2.57e-15,171;UBERON:0006601,2.57e-15,171;UBERON:0001950,5.57e-14,20;UBERON:0002336,1.61e-13,1;UBERON:0011215,1.61e-13,1;UBERON:0001018,1.61e-13,1;UBERON:0002473,1.61e-13,1;UBERON:0005340,1.61e-13,1;UBERON:0003544,1.61e-13,1;UBERON:0005970,1.61e-13,1;UBERON:0002316,1.61e-13,1;UBERON:0001020,1.61e-13,1;UBERON:0002437,1.61e-13,1;UBERON:0011216,6.05e-13,223;UBERON:0001882,6.06e-13,1;UBERON:0005403,6.06e-13,1;UBERON:0002784,7.26e-13,4;UBERON:0003112,7.68e-13,1;UBERON:0011158,7.68e-13,1;UBERON:0003128,7.68e-13,1;UBERON:0001703,7.68e-13,1;UBERON:0002241,7.68e-13,1;UBERON:0004761,7.68e-13,1;UBERON:0009617,7.68e-13,1;UBERON:0002619,9.23e-13,22;UBERON:0002038,1.09e-12,1;UBERON:0009661,1.09e-12,1;UBERON:0002950,1.09e-12,1;UBERON:0001891,1.09e-12,1;UBERON:0009616,1.09e-12,1;UBERON:0010286,1.09e-12,1;UBERON:0000025,9.37e-12,192;UBERON:0000956,2.78e-11,25;UBERON:0000203,2.78e-11,25;UBERON:0000349,2.04e-10,5;UBERON:0001872,2.25e-10,5;UBERON:0004733,2.39e-09,12;UBERON:0002028,2.39e-09,12;UBERON:0007277,2.39e-09,12;UBERON:0004111,5.23e-09,240;UBERON:0004732,1.14e-08,13;UBERON:0001871,9.24e-08,6;UBERON:0003076,1.40e-07,15;UBERON:0003057,1.40e-07,15;UBERON:0005162,2.15e-07,2;UBERON:0000122,2.15e-07,2;UBERON:0001876,2.43e-07,2;UBERON:0001875,3.48e-07,2;UBERON:0006514,3.48e-07,2;UBERON:0002148,3.70e-07,2;UBERON:0006331,3.70e-07,2;UBERON:0009662,3.70e-07,2;UBERON:0005253,4.69e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.29875337426592,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57226004797588,0,1.1713222286267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13959432720582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.958337652243951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.789744236554321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,1.19009341568421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.625954653532499,0.573409195690071,0.443716206147409,1.4903136705932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15612605173627,0,0.798169295285756,0.205116364240755,0.252071696221718,0.899044282034833,1.13032951942296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675375846183947,3.12431239445539,0.826747186004736,1.07806877329642,0,0,0,0,0,0,0,0,0,0,0,0,1.01954599465248,0.789273282754189,0,0,0,0.942693539496011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0,0,0,0,0,0,0,0,1.00337708206016,0,1.29183831362738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,1.24119595034274,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@CAPN13 | |||
}} |
Revision as of 02:28, 21 January 2014
Short description: | p3@CAPN13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_3_at_CAPN13_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000465960_5end |
EntrezGene: | CAPN13 |
HGNC: | 16663 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data