FFCP PHASE1:Hg19::chr3:50306390..50306399,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7869 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=10724 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-38bp_to_ENST00000418948_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_8_at_SEMA3B_5end | |||
|id=chr3:50306390..50306399,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.19e-23;1!UBERON:0003056;8.63e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.43e-26!115;UBERON:0001049!9.03e-26!57;UBERON:0005068!9.03e-26!57;UBERON:0006241!9.03e-26!57;UBERON:0007135!9.03e-26!57;UBERON:0003075!1.42e-22!86;UBERON:0007284!1.42e-22!86;UBERON:0002780!5.33e-22!41;UBERON:0001890!5.33e-22!41;UBERON:0006240!5.33e-22!41;UBERON:0005743!2.44e-21!86;UBERON:0003080!2.81e-21!42;UBERON:0002020!3.75e-21!34;UBERON:0003528!3.75e-21!34;UBERON:0001893!3.91e-21!34;UBERON:0002616!4.37e-21!59;UBERON:0002346!5.57e-21!90;UBERON:0001017!3.69e-20!82;UBERON:0002791!5.09e-20!33;UBERON:0000955!7.08e-20!69;UBERON:0006238!7.08e-20!69;UBERON:0000033!1.15e-19!123;UBERON:0003056!1.52e-19!61;UBERON:0000073!1.93e-19!94;UBERON:0001016!1.93e-19!94;UBERON:0000153!5.03e-19!129;UBERON:0007811!5.03e-19!129;UBERON:0001869!1.95e-18!32;UBERON:0002619!1.39e-14!22;UBERON:0001950!3.15e-14!20;UBERON:0004121!1.49e-12!169;UBERON:0000956!2.38e-12!25;UBERON:0000203!2.38e-12!25;UBERON:0000924!6.28e-12!173;UBERON:0006601!6.28e-12!173;UBERON:0002308!2.69e-11!9;UBERON:0000125!2.69e-11!9;UBERON:0000475!4.92e-11!365;UBERON:0000062!1.21e-10!511;UBERON:0000200!2.49e-10!6;UBERON:0002298!1.40e-09!8;UBERON:0009663!1.84e-08!7;UBERON:0000064!3.25e-07!219;UBERON:0000481!7.44e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001897;5.58e-45;2!UBERON:0005162;5.58e-45;2!UBERON:0000122;5.58e-45;2!UBERON:0010225;5.58e-45;2!UBERON:0001875;1.53e-44;2!UBERON:0006514;1.53e-44;2!UBERON:0000941;1.19e-23;1!UBERON:0001785;1.19e-23;1!UBERON:0002464;1.19e-23;1!UBERON:0004904;1.19e-23;1!UBERON:0001021;1.19e-23;1!UBERON:0002336;3.28e-23;1!UBERON:0011215;3.28e-23;1!UBERON:0001018;3.28e-23;1!UBERON:0002473;3.28e-23;1!UBERON:0005340;3.28e-23;1!UBERON:0003544;3.28e-23;1!UBERON:0005970;3.28e-23;1!UBERON:0002316;3.28e-23;1!UBERON:0001020;3.28e-23;1!UBERON:0002437;3.28e-23;1!UBERON:0002784;4.34e-23;4!UBERON:0002780;2.17e-16;41!UBERON:0001890;2.17e-16;41!UBERON:0001894;1.19e-13;7!UBERON:0009663;1.58e-13;7!UBERON:0000073;1.40e-12;53!UBERON:0002616;1.40e-12;53!UBERON:0003714;1.56e-12;2!UBERON:0002420;9.69e-11;9!UBERON:0000125;9.69e-11;9!UBERON:0007245;9.69e-11;9!UBERON:0002308;9.69e-11;9!UBERON:0010009;9.69e-11;9!UBERON:0010011;9.69e-11;9!UBERON:0000454;9.69e-11;9!UBERON:0001893;8.09e-10;34!UBERON:0001896;1.21e-08;3!UBERON:0005290;1.21e-08;3!UBERON:0001017;3.61e-08;75!UBERON:0004732;8.74e-08;13!UBERON:0001016;1.23e-07;83!UBERON:0000955;2.42e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,2.55e-45,2;UBERON:0000122,2.55e-45,2;UBERON:0001897,4.00e-45,2;UBERON:0010225,4.00e-45,2;UBERON:0001875,2.98e-44,2;UBERON:0006514,2.98e-44,2;UBERON:0000941,1.07e-23,1;UBERON:0001785,1.07e-23,1;UBERON:0002464,1.07e-23,1;UBERON:0004904,1.07e-23,1;UBERON:0001021,1.07e-23,1;UBERON:0003902,1.07e-23,1;UBERON:0005425,1.07e-23,1;UBERON:0002336,1.67e-23,1;UBERON:0011215,1.67e-23,1;UBERON:0001018,1.67e-23,1;UBERON:0002473,1.67e-23,1;UBERON:0005340,1.67e-23,1;UBERON:0003544,1.67e-23,1;UBERON:0005970,1.67e-23,1;UBERON:0002316,1.67e-23,1;UBERON:0001020,1.67e-23,1;UBERON:0002437,1.67e-23,1;UBERON:0002784,3.68e-23,4;UBERON:0000073,8.16e-20,53;UBERON:0002616,8.16e-20,53;UBERON:0002780,6.83e-19,41;UBERON:0001890,6.83e-19,41;UBERON:0003080,6.83e-19,41;UBERON:0006240,6.83e-19,41;UBERON:0001049,9.03e-19,56;UBERON:0005068,9.03e-19,56;UBERON:0006241,9.03e-19,56;UBERON:0007135,9.03e-19,56;UBERON:0003056,2.42e-17,61;UBERON:0003075,8.52e-17,82;UBERON:0007284,8.52e-17,82;UBERON:0002346,5.12e-16,86;UBERON:0000955,2.82e-15,68;UBERON:0006238,2.82e-15,68;UBERON:0001016,3.87e-15,89;UBERON:0001894,1.08e-13,7;UBERON:0006222,1.08e-13,7;UBERON:0009663,1.91e-13,7;UBERON:0010371,3.05e-13,104;UBERON:0001017,7.20e-13,81;UBERON:0003714,1.48e-12,2;UBERON:0007023,3.52e-12,114;UBERON:0002420,1.12e-10,9;UBERON:0000125,1.12e-10,9;UBERON:0007245,1.12e-10,9;UBERON:0002308,1.12e-10,9;UBERON:0010009,1.12e-10,9;UBERON:0010011,1.12e-10,9;UBERON:0000454,1.12e-10,9;UBERON:0001893,1.88e-10,34;UBERON:0010314,2.09e-10,132;UBERON:0001896,1.51e-08,3;UBERON:0005290,1.51e-08,3;UBERON:0010096,1.51e-08,3;UBERON:0004121,6.98e-08,171;UBERON:0000924,6.98e-08,171;UBERON:0006601,6.98e-08,171;UBERON:0004732,9.51e-08,13;UBERON:0000025,4.73e-07,192;UBERON:0001781,6.50e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.434539556882471,0.795285947051099,0.973269740605272,0.0945348171640679,0.221729397462564,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0.300476117813194,0,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0.339121184620975,0.193260853163297,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0.110293972732394,0.435758888184812,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0.102268682502155,0,0,0.179736702294654,0,0,0,0,0,0,0.927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,1.68502832451693,0.802577647298789,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.146178634172371,0.246346371159628,0.0969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,1.23214841002794,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.236349546921671,0.0824158583811665,0.0674035438541849,0,0,0,0.408610218334727,0,0,0,0,0,0.121499113316049,0,0.236417121897595,0.262272940674991,0,0.179287339332845,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0,0,0.387848869084652,0.66116300871345,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0.612691153526923,0,0.314108192500469,0.886068179966986,0.366078794705889,0.625954653532499,1.14681839138014,0.221858103073705,0.372578417648301,0,0.124980407962107,0,0.285465333544967,0,0,0,0,0,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.192687675289379,1.41696576325585,0.319267718114302,0.205116364240755,0,0.207471757392654,0.807378228159255,2.85538840518309,0.0981477185010256,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0.270150338473579,0.781078098613847,0.620060389503552,0.380494861163441,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0,0.203909198930495,0.460409414939944,0,0.222462803784138,0.078493092850514,0.471346769748006,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.594092800654172,0,0.169927114687817,0,0,0,0,0,0,0,0,0.716697915757256,0,0.611923411718232,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,2.48750831837634,1.65492793379032,0,0.23806443146374,0,0,0,0.12729431655633,0,0,0,0.134704106029175,0.143444410785353,0,0,0,0,0.0898252021065869,0,0.244482888365733,0.406896178315738,0,0,0 | |||
|short_description=p8@SEMA3B | |||
}} |
Revision as of 19:00, 21 January 2014
Short description: | p8@SEMA3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SEMA3B_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -38bp_to_ENST00000418948_5end |
EntrezGene: | SEMA3B |
HGNC: | 10724 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data