FFCP PHASE1:Hg19::chr3:116163910..116163919,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4045 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6705 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-80bp_to_ENST00000333617_5end | |||
|description=CAGE_peak_9_at_LSAMP_5end | |||
|id=chr3:116163910..116163919,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.24e-66;3!UBERON:0010122;2.45e-12;2!UBERON:0006601;1.70e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.35e-46!57;UBERON:0005068!3.35e-46!57;UBERON:0006241!3.35e-46!57;UBERON:0007135!3.35e-46!57;UBERON:0002616!4.38e-44!59;UBERON:0005743!2.61e-42!86;UBERON:0002346!6.23e-42!90;UBERON:0000955!7.37e-42!69;UBERON:0006238!7.37e-42!69;UBERON:0001017!6.09e-41!82;UBERON:0000073!1.55e-40!94;UBERON:0001016!1.55e-40!94;UBERON:0003075!1.16e-38!86;UBERON:0007284!1.16e-38!86;UBERON:0002780!6.57e-36!41;UBERON:0001890!6.57e-36!41;UBERON:0006240!6.57e-36!41;UBERON:0003080!7.55e-35!42;UBERON:0007023!3.03e-33!115;UBERON:0003056!4.49e-30!61;UBERON:0001893!5.67e-30!34;UBERON:0002020!1.45e-29!34;UBERON:0003528!1.45e-29!34;UBERON:0002791!2.41e-28!33;UBERON:0000033!7.43e-28!123;UBERON:0001869!1.31e-26!32;UBERON:0000153!6.85e-26!129;UBERON:0007811!6.85e-26!129;UBERON:0000924!1.94e-24!173;UBERON:0006601!1.94e-24!173;UBERON:0004121!4.30e-22!169;UBERON:0002619!7.94e-19!22;UBERON:0001950!2.80e-18!20;UBERON:0002308!7.38e-17!9;UBERON:0000125!7.38e-17!9;UBERON:0000956!4.00e-16!25;UBERON:0000203!4.00e-16!25;UBERON:0009663!9.66e-14!7;UBERON:0002420!1.26e-13!9;UBERON:0007245!1.26e-13!9;UBERON:0010009!1.26e-13!9;UBERON:0010011!1.26e-13!9;UBERON:0000454!1.26e-13!9;UBERON:0004733!7.83e-13!12;UBERON:0002028!7.83e-13!12;UBERON:0007277!7.83e-13!12;UBERON:0003076!3.75e-12!15;UBERON:0003057!3.75e-12!15;UBERON:0004732!1.10e-11!13;UBERON:0002680!9.00e-11!9;UBERON:0001895!9.00e-11!9;UBERON:0010092!9.00e-11!9;UBERON:0000025!2.58e-09!194;UBERON:0002298!6.43e-09!8;UBERON:0000369!1.55e-08!4;UBERON:0002435!1.55e-08!4;UBERON:0000204!1.55e-08!4;UBERON:0010082!1.55e-08!4;UBERON:0000475!3.51e-08!365;UBERON:0001871!3.71e-08!7;UBERON:0000200!4.78e-08!6;UBERON:0000481!1.77e-07!347;UBERON:0000477!2.08e-07!286;UBERON:0000064!2.56e-07!219;UBERON:0001894!2.80e-07!7;UBERON:0006222!2.80e-07!7;UBERON:0004111!2.97e-07!241;UBERON:0002021!5.55e-07!5;UBERON:0000988!8.90e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002680;2.94e-39;9!UBERON:0001895;2.94e-39;9!UBERON:0002037;1.73e-33;6!UBERON:0004733;1.33e-29;12!UBERON:0002028;1.33e-29;12!UBERON:0004732;2.26e-27;13!UBERON:0002902;2.93e-23;1!UBERON:0009899;2.93e-23;1!UBERON:0000955;2.20e-18;68!UBERON:0000073;6.33e-14;53!UBERON:0002616;6.33e-14;53!UBERON:0009663;1.49e-13;7!UBERON:0001016;8.09e-13;83!UBERON:0001905;1.48e-12;2!UBERON:0002757;1.48e-12;2!UBERON:0010134;1.48e-12;2!UBERON:0005408;1.48e-12;2!UBERON:0001899;1.48e-12;2!UBERON:0001873;2.45e-12;2!UBERON:0001875;2.45e-12;2!UBERON:0006514;2.45e-12;2!UBERON:0001017;2.34e-11;75!UBERON:0002420;9.23e-11;9!UBERON:0000125;9.23e-11;9!UBERON:0007245;9.23e-11;9!UBERON:0002308;9.23e-11;9!UBERON:0010009;9.23e-11;9!UBERON:0010011;9.23e-11;9!UBERON:0000454;9.23e-11;9!UBERON:0000988;1.17e-08;3!UBERON:0005383;1.17e-08;3!UBERON:0005382;1.17e-08;3!UBERON:0003296;6.49e-07;4!UBERON:0010133;6.49e-07;4!UBERON:0002784;6.49e-07;4!UBERON:0000369;8.37e-07;4!UBERON:0002435;8.37e-07;4!UBERON:0000204;8.37e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002680,3.25e-39,9;UBERON:0001895,3.25e-39,9;UBERON:0010092,3.25e-39,9;UBERON:0002037,1.31e-33,6;UBERON:0006215,1.31e-33,6;UBERON:0004733,1.43e-29,12;UBERON:0002028,1.43e-29,12;UBERON:0007277,1.43e-29,12;UBERON:0004732,2.42e-27,13;UBERON:0000073,8.37e-26,53;UBERON:0002616,8.37e-26,53;UBERON:0000955,3.29e-25,68;UBERON:0006238,3.29e-25,68;UBERON:0001049,1.92e-24,56;UBERON:0005068,1.92e-24,56;UBERON:0006241,1.92e-24,56;UBERON:0007135,1.92e-24,56;UBERON:0003076,8.97e-24,15;UBERON:0003057,8.97e-24,15;UBERON:0002902,5.13e-23,1;UBERON:0009899,5.13e-23,1;UBERON:0001017,3.01e-21,81;UBERON:0001016,3.70e-19,89;UBERON:0003075,9.29e-17,82;UBERON:0007284,9.29e-17,82;UBERON:0002346,5.56e-16,86;UBERON:0009663,1.49e-13,7;UBERON:0010371,3.26e-13,104;UBERON:0001905,1.48e-12,2;UBERON:0002757,1.48e-12,2;UBERON:0010134,1.48e-12,2;UBERON:0005408,1.48e-12,2;UBERON:0001899,1.48e-12,2;UBERON:0001873,2.07e-12,2;UBERON:0010122,2.07e-12,2;UBERON:0001875,2.90e-12,2;UBERON:0006514,2.90e-12,2;UBERON:0007023,3.74e-12,114;UBERON:0002420,9.23e-11,9;UBERON:0000125,9.23e-11,9;UBERON:0007245,9.23e-11,9;UBERON:0002308,9.23e-11,9;UBERON:0010009,9.23e-11,9;UBERON:0010011,9.23e-11,9;UBERON:0000454,9.23e-11,9;UBERON:0010314,2.21e-10,132;UBERON:0004121,5.05e-10,171;UBERON:0000924,5.05e-10,171;UBERON:0006601,5.05e-10,171;UBERON:0002780,8.50e-09,41;UBERON:0001890,8.50e-09,41;UBERON:0003080,8.50e-09,41;UBERON:0006240,8.50e-09,41;UBERON:0005383,1.04e-08,3;UBERON:0005382,1.04e-08,3;UBERON:0000988,1.51e-08,3;UBERON:0011216,1.33e-07,223;UBERON:0000025,4.69e-07,192;UBERON:0003296,6.50e-07,4;UBERON:0010133,6.50e-07,4;UBERON:0002784,6.50e-07,4;UBERON:0000369,7.70e-07,4;UBERON:0002435,7.70e-07,4;UBERON:0000204,7.70e-07,4;UBERON:0010082,7.70e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.994192127183747,0,0,0,0,0.123121058076788,0,0,0,0,0,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.189069634328136,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0.197286811273867,0,0,0,0.556608588971108,1.99613798001194,0,0,0,0,0,0,0,0.291604613383254,0.347249989866585,1.77148277162768,0.120596438625408,1.52581736317083,1.76926815889959,1.77328571372128,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0.353830258013357,0,0.296521128680622,0,0.104421949505455,0.606610196826093,0,0.702793337176017,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.569797163602908,0,0,0,0,0,0.229073192331831,0,0,0.124252535565433,0,0,0,0,0,1.20084057741958,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.546746009922222,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0.106787412567695,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0.332787154610557,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0.212574920101683,0,0,0,0,0.80057074828547,0,0,0.449604575675217,0,0.319267718114302,0.41023272848151,0.252071696221718,1.10651603942749,0.645902582527404,0,0,0,0,0,0,0,0.397832444232549,0.150420656698515,0,0,0,0,0,0.405225507710368,0,0.206686796501184,0.507326481551255,0,0,0.496211178389294,0.175871244359621,0,0.535701835878287,2.35398605553177,0,0.227662191351298,0,0.115233987555779,0,1.01954599465248,0.460409414939944,0,0,0.313972371402056,0.314231179832004,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0.203974470572744,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p9@LSAMP | |||
}} |
Revision as of 20:42, 21 January 2014
Short description: | p9@LSAMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LSAMP_5end |
Coexpression cluster: | NA |
Association with transcript: | -80bp_to_ENST00000333617_5end |
EntrezGene: | LSAMP |
HGNC: | 6705 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data