FFCP PHASE1:Hg19::chr4:3371907..3371932,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6002 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9994 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000506998_5end | |||
|description=CAGE_peak_3_at_RGS12_5end | |||
|id=chr4:3371907..3371932,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.45e-28!65;CL:0002194!4.45e-27!63;CL:0000576!4.45e-27!63;CL:0000040!4.45e-27!63;CL:0000559!4.45e-27!63;CL:0002057!1.09e-26!42;CL:0000557!2.75e-26!71;CL:0000860!3.62e-23!45;CL:0000839!4.85e-23!70;CL:0000766!1.27e-22!76;CL:0000115!3.98e-11!35;CL:0000763!8.80e-11!112;CL:0000049!8.80e-11!112;CL:0002139!2.02e-09!24;CL:0002087!1.01e-07!119;CL:0000222!1.30e-07!119;CL:0000738!1.73e-07!140;CL:0002078!4.52e-07!44;CL:0002031!4.76e-07!124;CL:0002393!9.20e-07!9;CL:0002397!9.20e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.08e-25;33!CL:0002057;5.08e-25;33!CL:0000473;6.89e-25;39!CL:0000234;6.89e-25;39!CL:0000576;4.87e-21;48!CL:0000766;4.04e-15;69!CL:0000115;1.28e-12;36!CL:0002139;1.81e-10;24!CL:1000413;5.02e-07;9!CL:0000071;5.38e-07;18!CL:0002078;6.86e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.12e-39,48;CL:0000234,1.12e-39,48;CL:0002009,3.86e-38,61;CL:0002194,4.35e-36,59;CL:0000576,4.35e-36,59;CL:0000040,4.35e-36,59;CL:0000559,4.35e-36,59;CL:0000860,6.87e-35,42;CL:0002057,6.87e-35,42;CL:0000557,9.48e-34,67;CL:0000766,3.33e-30,72;CL:0000839,6.33e-30,66;CL:0000763,1.34e-15,108;CL:0000049,1.34e-15,108;CL:0000115,2.21e-14,36;CL:0002087,3.68e-11,115;CL:0000738,3.91e-11,136;CL:0002139,1.07e-10,24;CL:0002031,7.83e-10,120;CL:0002078,1.68e-09,45;CL:0002393,1.13e-08,9;CL:0002397,1.13e-08,9;CL:0000071,3.96e-07,18;CL:0002546,3.96e-07,18;CL:0000213,4.39e-07,58;CL:0000215,4.39e-07,58;CL:1000413,4.64e-07,9;CL:0000222,7.96e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002057;2.74e-25;42!CL:0002546;5.38e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.78e-23!216;UBERON:0001474!2.14e-21!86;UBERON:0002371!2.15e-21!80;UBERON:0002193!1.25e-20!112;UBERON:0002405!1.37e-20!115;UBERON:0004765!3.29e-18!101;UBERON:0001434!3.29e-18!101;UBERON:0001049!8.16e-18!57;UBERON:0005068!8.16e-18!57;UBERON:0006241!8.16e-18!57;UBERON:0007135!8.16e-18!57;UBERON:0002204!1.66e-17!167;UBERON:0002390!2.27e-17!102;UBERON:0003061!2.27e-17!102;UBERON:0000055!6.35e-17!69;UBERON:0002049!7.29e-16!79;UBERON:0007798!7.29e-16!79;UBERON:0000025!7.68e-16!194;UBERON:0001017!9.59e-16!82;UBERON:0002616!2.23e-15!59;UBERON:0000955!1.01e-14!69;UBERON:0006238!1.01e-14!69;UBERON:0001893!1.33e-14!34;UBERON:0001981!2.00e-14!60;UBERON:0007500!2.00e-14!60;UBERON:0004537!2.00e-14!60;UBERON:0006965!2.00e-14!60;UBERON:0005743!2.03e-14!86;UBERON:0002020!2.36e-14!34;UBERON:0003528!2.36e-14!34;UBERON:0003080!2.59e-14!42;UBERON:0002780!2.84e-14!41;UBERON:0001890!2.84e-14!41;UBERON:0006240!2.84e-14!41;UBERON:0002791!3.37e-14!33;UBERON:0001869!1.47e-13!32;UBERON:0003075!5.78e-13!86;UBERON:0007284!5.78e-13!86;UBERON:0000073!5.81e-13!94;UBERON:0001016!5.81e-13!94;UBERON:0004111!5.93e-13!241;UBERON:0002346!6.00e-13!90;UBERON:0004535!1.54e-12!110;UBERON:0000467!5.33e-12!625;UBERON:0001637!6.67e-12!42;UBERON:0003509!6.67e-12!42;UBERON:0004572!6.67e-12!42;UBERON:0000480!8.26e-12!626;UBERON:0001009!9.71e-12!113;UBERON:0002619!5.10e-11!22;UBERON:0004872!7.16e-11!84;UBERON:0000956!1.94e-10!25;UBERON:0000203!1.94e-10!25;UBERON:0001950!4.19e-10!20;UBERON:0000468!4.79e-10!659;UBERON:0004573!8.13e-10!33;UBERON:0004571!8.13e-10!33;UBERON:0007023!1.33e-09!115;UBERON:0000477!2.32e-09!286;UBERON:0003056!4.89e-09!61;UBERON:0002050!1.02e-07!605;UBERON:0005423!1.02e-07!605;UBERON:0000922!1.06e-07!612;UBERON:0000923!1.20e-07!604;UBERON:0005291!1.20e-07!604;UBERON:0006598!1.20e-07!604;UBERON:0002532!1.20e-07!604;UBERON:0000153!1.69e-07!129;UBERON:0007811!1.69e-07!129;UBERON:0000947!2.56e-07!21;UBERON:0010191!2.56e-07!21;UBERON:0000033!2.63e-07!123;UBERON:0003914!6.88e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.51e-15;34!UBERON:0002791;6.64e-15;32!UBERON:0003528;7.39e-15;34!UBERON:0002020;7.39e-15;34!UBERON:0001869;8.70e-15;32!UBERON:0002619;9.21e-15;22!UBERON:0001950;1.79e-13;20!UBERON:0002780;5.87e-13;41!UBERON:0001890;5.87e-13;41!UBERON:0000956;3.99e-12;25!UBERON:0000203;3.99e-12;25!UBERON:0000073;1.12e-11;53!UBERON:0002616;1.12e-11;53!UBERON:0004573;3.14e-11;33!UBERON:0004571;3.14e-11;33!UBERON:0001637;3.84e-11;42!UBERON:0003509;3.84e-11;42!UBERON:0004572;3.84e-11;42!UBERON:0000947;4.90e-10;21!UBERON:0010191;4.90e-10;21!UBERON:0000055;2.35e-09;65!UBERON:0007500;5.73e-09;56!UBERON:0001981;5.73e-09;56!UBERON:0004537;5.73e-09;56!UBERON:0001017;1.84e-08;75!UBERON:0002420;9.79e-08;9!UBERON:0007245;9.79e-08;9!UBERON:0010009;9.79e-08;9!UBERON:0010011;9.79e-08;9!UBERON:0000454;9.79e-08;9!UBERON:0000955;1.47e-07;68!UBERON:0003915;5.02e-07;9!UBERON:0004700;5.02e-07;9!UBERON:0001917;5.02e-07;9!UBERON:0004638;5.38e-07;18!UBERON:0001986;5.38e-07;18!UBERON:0004852;5.38e-07;18!UBERON:0000125;5.38e-07;9!UBERON:0002308;5.38e-07;9!UBERON:0001016;5.97e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,2.85e-29,203;UBERON:0002405,7.46e-28,93;UBERON:0002371,4.72e-27,76;UBERON:0001474,4.98e-27,82;UBERON:0004765,2.02e-25,90;UBERON:0002193,6.13e-24,108;UBERON:0001049,1.08e-21,56;UBERON:0005068,1.08e-21,56;UBERON:0006241,1.08e-21,56;UBERON:0007135,1.08e-21,56;UBERON:0001434,1.40e-21,100;UBERON:0002390,8.90e-21,98;UBERON:0003061,8.90e-21,98;UBERON:0000025,6.58e-20,192;UBERON:0000073,7.11e-20,53;UBERON:0002616,7.11e-20,53;UBERON:0000055,6.94e-18,68;UBERON:0001893,1.84e-17,34;UBERON:0002204,2.49e-17,167;UBERON:0002780,2.69e-17,41;UBERON:0001890,2.69e-17,41;UBERON:0003080,2.69e-17,41;UBERON:0006240,2.69e-17,41;UBERON:0003528,3.87e-17,34;UBERON:0002020,3.87e-17,34;UBERON:0001017,9.38e-17,81;UBERON:0000955,2.32e-16,68;UBERON:0006238,2.32e-16,68;UBERON:0002791,2.92e-16,32;UBERON:0001869,4.60e-16,32;UBERON:0004111,2.11e-15,240;UBERON:0007500,4.58e-15,59;UBERON:0001981,4.58e-15,59;UBERON:0004537,4.58e-15,59;UBERON:0006965,4.58e-15,59;UBERON:0002619,1.80e-14,22;UBERON:0003075,2.62e-14,82;UBERON:0007284,2.62e-14,82;UBERON:0001016,2.84e-14,89;UBERON:0002346,3.22e-14,86;UBERON:0002049,4.60e-14,78;UBERON:0007798,4.60e-14,78;UBERON:0001637,6.70e-14,42;UBERON:0003509,6.70e-14,42;UBERON:0004572,6.70e-14,42;UBERON:0001950,3.19e-13,20;UBERON:0000926,3.92e-13,315;UBERON:0004120,3.92e-13,315;UBERON:0006603,3.92e-13,315;UBERON:0002050,4.32e-13,564;UBERON:0000923,2.54e-12,560;UBERON:0010316,2.54e-12,560;UBERON:0005291,2.54e-12,560;UBERON:0006598,2.54e-12,560;UBERON:0010317,2.54e-12,560;UBERON:0002532,2.54e-12,560;UBERON:0004573,2.70e-12,33;UBERON:0004571,2.70e-12,33;UBERON:0000956,7.01e-12,25;UBERON:0000203,7.01e-12,25;UBERON:0004535,2.13e-11,109;UBERON:0010314,2.88e-11,132;UBERON:0005423,4.66e-11,581;UBERON:0004872,6.32e-11,83;UBERON:0001009,1.26e-10,112;UBERON:0003056,2.68e-10,61;UBERON:0000947,5.18e-10,21;UBERON:0010191,5.18e-10,21;UBERON:0000922,7.76e-10,592;UBERON:0010371,1.08e-09,104;UBERON:0002420,1.19e-07,9;UBERON:0007245,1.19e-07,9;UBERON:0010009,1.19e-07,9;UBERON:0010011,1.19e-07,9;UBERON:0000454,1.19e-07,9;UBERON:0003914,2.77e-07,117;UBERON:0004638,3.96e-07,18;UBERON:0001986,3.96e-07,18;UBERON:0004852,3.96e-07,18;UBERON:0007023,4.41e-07,114;UBERON:0003915,4.64e-07,9;UBERON:0004700,4.64e-07,9;UBERON:0001917,4.64e-07,9;UBERON:0000125,7.28e-07,9;UBERON:0002308,7.28e-07,9 | |||
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| |||
|short_description=p3@RGS12 | |||
}} |
Revision as of 23:57, 21 January 2014
Short description: | p3@RGS12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RGS12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000506998_5end |
EntrezGene: | RGS12 |
HGNC: | 9994 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.12e-39 | 48 |
phagocyte | 1.12e-39 | 48 |
macrophage dendritic cell progenitor | 3.86e-38 | 61 |
monopoietic cell | 4.35e-36 | 59 |
monocyte | 4.35e-36 | 59 |
monoblast | 4.35e-36 | 59 |
promonocyte | 4.35e-36 | 59 |
classical monocyte | 6.87e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.87e-35 | 42 |
granulocyte monocyte progenitor cell | 9.48e-34 | 67 |
myeloid leukocyte | 3.33e-30 | 72 |
myeloid lineage restricted progenitor cell | 6.33e-30 | 66 |
myeloid cell | 1.34e-15 | 108 |
common myeloid progenitor | 1.34e-15 | 108 |
endothelial cell | 2.21e-14 | 36 |
nongranular leukocyte | 3.68e-11 | 115 |
leukocyte | 3.91e-11 | 136 |
endothelial cell of vascular tree | 1.07e-10 | 24 |
hematopoietic lineage restricted progenitor cell | 7.83e-10 | 120 |
meso-epithelial cell | 1.68e-09 | 45 |
intermediate monocyte | 1.13e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.13e-08 | 9 |
blood vessel endothelial cell | 3.96e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.96e-07 | 18 |
lining cell | 4.39e-07 | 58 |
barrier cell | 4.39e-07 | 58 |
endothelial cell of artery | 4.64e-07 | 9 |
mesodermal cell | 7.96e-07 | 121 |