FFCP PHASE1:Mm9::chr11:118163480..118163484,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:118163480..118163484,-|id=chr11:118163480..118163484,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,2.99e-24,3;CL:0000359,2.99e-24,3;CL:0002539,2.99e-24,3;CL:0000514,2.99e-24,3;CL:0000680,1.08e-12,6;CL:0000187,1.08e-12,6;CL:0000056,1.08e-12,6;CL:0000222,4.98e-11,7;CL:0000878,7.56e-10,2;CL:0000129,7.56e-10,2;CL:0000355,8.40e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.99e-24,3;UBERON:0004237,2.99e-24,3;UBERON:0004695,2.99e-24,3;UBERON:0002111,2.99e-24,3;UBERON:0004178,2.99e-24,3;UBERON:0000947,1.74e-18,4;UBERON:0001637,1.74e-18,4;UBERON:0004573,1.74e-18,4;UBERON:0003509,1.74e-18,4;UBERON:0004571,1.74e-18,4;UBERON:0010191,1.74e-18,4;UBERON:0004572,1.74e-18,4;UBERON:0000055,5.16e-15,5;UBERON:0007500,5.16e-15,5;UBERON:0001981,5.16e-15,5;UBERON:0002049,5.16e-15,5;UBERON:0007798,5.16e-15,5;UBERON:0004537,5.16e-15,5;UBERON:0006965,5.16e-15,5;UBERON:0001134,8.40e-09,9;UBERON:0002036,8.40e-09,9;UBERON:0002385,8.40e-09,9;UBERON:0000486,8.40e-09,9;UBERON:0007503,8.40e-09,9;UBERON:0001015,8.40e-09,9;UBERON:0002329,8.40e-09,9;UBERON:0003082,8.40e-09,9;UBERON:0003059,8.40e-09,9;UBERON:0007282,8.40e-09,9;UBERON:0004290,8.40e-09,9;UBERON:0009618,8.40e-09,9;UBERON:0000383,5.10e-08,10;UBERON:0007524,2.24e-07,11;UBERON:0003077,2.24e-07,11;UBERON:0007285,2.24e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39203954153597,2.53442328048786,0.917733760808408,0.782391344348039,0,0.659058548203415,0.194429899074283,0.55994568650145,0,0,0,0,0.257259436035947,0.573066879877513,0,0,0,0,0,0.889294796111139,0,0.988866362566974,0,0.299600110518405,1.15265491596466,0,0.270011876663381,0,0,0.220868540951614,0,0.0958454710182364,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0,0.519572009205738,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0.230615497256059,0,0.352766121407114,0,0.494389935468748,0,0,0.161766849947409,0.220841518460394,0,0,0,0.41889341362691,0.255457055208591,0,0,0,0,0,0.125654352112864,0,0.255715457330331,0,0,0.203678727700633,0.124406970610093,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0,0.215567992932842,0.378212160335639,0.351902248327898,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.569003702859245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0.44292937929755,0.318909537314974,0,0,0.144649058581512,0,0,0,0.275936746304732,0.160550589987792,0.117211686592203,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0,0,0.425820255624806,0,0,0.494910368917606,2.65490276679926,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0.161464426695906,0.180938774784468,0,0,0.291480836629851,0,0.170870880797853,0.206386867963223,0,0.188368457004691,0,0,0.169978429993855,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0.621339313086926,0,0.149516546043979,0.330916980914195,0.194451188344048,0,0,0.117357238645754,0,0,0,0.288030006257865,0,0,0.102710957164827,0.129920822977795,0,0.39736270956253,0.120195449519969,0.147689527174577,0,0,0.100826185136841,0,0,0,0,0,0,0,0.579568782096571,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0.467863216890817,0.214871054048298,1.3390183244819,0,0.231867835620421|short_description=p@chr11:118163480..118163484,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:118163480..118163484,- | |||
|description=CAGE_peak_at_chr11:118163480..118163484,- | |||
|id=chr11:118163480..118163484,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.99e-24,3;CL:0000359,2.99e-24,3;CL:0002539,2.99e-24,3;CL:0000514,2.99e-24,3;CL:0000680,1.08e-12,6;CL:0000187,1.08e-12,6;CL:0000056,1.08e-12,6;CL:0000222,4.98e-11,7;CL:0000878,7.56e-10,2;CL:0000129,7.56e-10,2;CL:0000355,8.40e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.99e-24,3;UBERON:0004237,2.99e-24,3;UBERON:0004695,2.99e-24,3;UBERON:0002111,2.99e-24,3;UBERON:0004178,2.99e-24,3;UBERON:0000947,1.74e-18,4;UBERON:0001637,1.74e-18,4;UBERON:0004573,1.74e-18,4;UBERON:0003509,1.74e-18,4;UBERON:0004571,1.74e-18,4;UBERON:0010191,1.74e-18,4;UBERON:0004572,1.74e-18,4;UBERON:0000055,5.16e-15,5;UBERON:0007500,5.16e-15,5;UBERON:0001981,5.16e-15,5;UBERON:0002049,5.16e-15,5;UBERON:0007798,5.16e-15,5;UBERON:0004537,5.16e-15,5;UBERON:0006965,5.16e-15,5;UBERON:0001134,8.40e-09,9;UBERON:0002036,8.40e-09,9;UBERON:0002385,8.40e-09,9;UBERON:0000486,8.40e-09,9;UBERON:0007503,8.40e-09,9;UBERON:0001015,8.40e-09,9;UBERON:0002329,8.40e-09,9;UBERON:0003082,8.40e-09,9;UBERON:0003059,8.40e-09,9;UBERON:0007282,8.40e-09,9;UBERON:0004290,8.40e-09,9;UBERON:0009618,8.40e-09,9;UBERON:0000383,5.10e-08,10;UBERON:0007524,2.24e-07,11;UBERON:0003077,2.24e-07,11;UBERON:0007285,2.24e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39203954153597,2.53442328048786,0.917733760808408,0.782391344348039,0,0.659058548203415,0.194429899074283,0.55994568650145,0,0,0,0,0.257259436035947,0.573066879877513,0,0,0,0,0,0.889294796111139,0,0.988866362566974,0,0.299600110518405,1.15265491596466,0,0.270011876663381,0,0,0.220868540951614,0,0.0958454710182364,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0,0.519572009205738,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0.230615497256059,0,0.352766121407114,0,0.494389935468748,0,0,0.161766849947409,0.220841518460394,0,0,0,0.41889341362691,0.255457055208591,0,0,0,0,0,0.125654352112864,0,0.255715457330331,0,0,0.203678727700633,0.124406970610093,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0,0.215567992932842,0.378212160335639,0.351902248327898,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.569003702859245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0.44292937929755,0.318909537314974,0,0,0.144649058581512,0,0,0,0.275936746304732,0.160550589987792,0.117211686592203,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0,0,0.425820255624806,0,0,0.494910368917606,2.65490276679926,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0.161464426695906,0.180938774784468,0,0,0.291480836629851,0,0.170870880797853,0.206386867963223,0,0.188368457004691,0,0,0.169978429993855,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0.621339313086926,0,0.149516546043979,0.330916980914195,0.194451188344048,0,0,0.117357238645754,0,0,0,0.288030006257865,0,0,0.102710957164827,0.129920822977795,0,0.39736270956253,0.120195449519969,0.147689527174577,0,0,0.100826185136841,0,0,0,0,0,0,0,0.579568782096571,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0.467863216890817,0.214871054048298,1.3390183244819,0,0.231867835620421 | |||
|short_description=p@chr11:118163480..118163484,- | |||
}} |
Latest revision as of 13:30, 5 August 2015
Short description: | p@chr11:118163480..118163484, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:118163480..118163484, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.99e-24 | 3 |
vascular associated smooth muscle cell | 2.99e-24 | 3 |
aortic smooth muscle cell | 2.99e-24 | 3 |
smooth muscle myoblast | 2.99e-24 | 3 |
muscle precursor cell | 1.08e-12 | 6 |
muscle cell | 1.08e-12 | 6 |
myoblast | 1.08e-12 | 6 |
mesodermal cell | 4.98e-11 | 7 |
central nervous system macrophage | 7.56e-10 | 2 |
microglial cell | 7.56e-10 | 2 |
multi-potent skeletal muscle stem cell | 8.40e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 2.99e-24 | 3 |
blood vessel smooth muscle | 2.99e-24 | 3 |
arterial system smooth muscle | 2.99e-24 | 3 |
artery smooth muscle tissue | 2.99e-24 | 3 |
aorta smooth muscle tissue | 2.99e-24 | 3 |
aorta | 1.74e-18 | 4 |
artery | 1.74e-18 | 4 |
systemic artery | 1.74e-18 | 4 |
arterial blood vessel | 1.74e-18 | 4 |
systemic arterial system | 1.74e-18 | 4 |
aortic system | 1.74e-18 | 4 |
arterial system | 1.74e-18 | 4 |
vessel | 5.16e-15 | 5 |
epithelial tube open at both ends | 5.16e-15 | 5 |
blood vessel | 5.16e-15 | 5 |
vasculature | 5.16e-15 | 5 |
vascular system | 5.16e-15 | 5 |
blood vasculature | 5.16e-15 | 5 |
vascular cord | 5.16e-15 | 5 |
skeletal muscle tissue | 8.40e-09 | 9 |
striated muscle tissue | 8.40e-09 | 9 |
muscle tissue | 8.40e-09 | 9 |
multilaminar epithelium | 8.40e-09 | 9 |
epithelial vesicle | 8.40e-09 | 9 |
musculature | 8.40e-09 | 9 |
somite | 8.40e-09 | 9 |
myotome | 8.40e-09 | 9 |
presomitic mesoderm | 8.40e-09 | 9 |
presumptive segmental plate | 8.40e-09 | 9 |
dermomyotome | 8.40e-09 | 9 |
trunk paraxial mesoderm | 8.40e-09 | 9 |
musculature of body | 5.10e-08 | 10 |
dense mesenchyme tissue | 2.24e-07 | 11 |
paraxial mesoderm | 2.24e-07 | 11 |
presumptive paraxial mesoderm | 2.24e-07 | 11 |