FFCP PHASE1:Mm9::chr12:28025584..28025593,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=100 | |MCL_coexpression_id=100 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:28025584..28025593,- | |||
|description=CAGE_peak_at_chr12:28025584..28025593,- | |description=CAGE_peak_at_chr12:28025584..28025593,- | ||
|id=chr12:28025584..28025593,- | |id=chr12:28025584..28025593,- | ||
|ontology_enrichment_celltype=CL:0000540!2.72e-11!33;CL:0000047!2.72e-11!33;CL:0000031!2.72e-11!33;CL:0000404!2.72e-11!33;CL:0000393!6.93e-09!39;CL:0000211!6.93e-09!39;CL:0002609!1.24e-08!6;CL:0000221!2.27e-08!44;CL:0000133!2.27e-08!44;CL:0000117!2.68e-08!23;CL:0000337!2.68e-08!23;CL:0002319!1.14e-07!43 | |ontology_enrichment_celltype=CL:0000540!2.72e-11!33;CL:0000047!2.72e-11!33;CL:0000031!2.72e-11!33;CL:0000404!2.72e-11!33;CL:0000393!6.93e-09!39;CL:0000211!6.93e-09!39;CL:0002609!1.24e-08!6;CL:0000221!2.27e-08!44;CL:0000133!2.27e-08!44;CL:0000117!2.68e-08!23;CL:0000337!2.68e-08!23;CL:0002319!1.14e-07!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,4.62e-27,6;CL:0000117,7.48e-13,23;CL:0000337,7.48e-13,23;CL:0000540,3.70e-09,33;CL:0000047,3.70e-09,33;CL:0000031,3.70e-09,33;CL:0000404,3.70e-09,33;CL:0000393,7.68e-08,39;CL:0000211,7.68e-08,39;CL:0002319,3.65e-07,43;CL:0002613,4.77e-07,3;CL:0000221,5.16e-07,44;CL:0000133,5.16e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000020!1.83e-07!12;UBERON:0001032!1.83e-07!12;UBERON:0004456!1.83e-07!12;UBERON:0005085!8.80e-07!13 | |ontology_enrichment_uberon=UBERON:0000020!1.83e-07!12;UBERON:0001032!1.83e-07!12;UBERON:0004456!1.83e-07!12;UBERON:0005085!8.80e-07!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.47e-10,29;UBERON:0002791,2.47e-10,29;UBERON:0001893,2.47e-10,29;UBERON:0002020,6.61e-09,34;UBERON:0000956,2.43e-08,21;UBERON:0001869,2.43e-08,21;UBERON:0000203,2.43e-08,21;UBERON:0002780,7.68e-08,39;UBERON:0001890,7.68e-08,39;UBERON:0006240,7.68e-08,39;UBERON:0003080,1.17e-07,40;UBERON:0002616,9.87e-07,46 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,1.8664130215526,2.02508907497536,2.10324961351382,0,0,0.489963196859816,0.575072826109418,0,0,0,0,0.263772575460388,0.457438218012048,1.56274011167028,0,0,0,0,0,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251308704225729,0,0,0,0,0,0,0,0,0.260240885925407,0.229902104433473,0.360124259610698,0.150704817835715,0.136072998302656,0.384341160854549,0,0,0,0,0.175951124163949,0,0.556094498451196,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.430846795465598,0.477937595905104,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0.18006109403131,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,1.8664130215526,2.02508907497536,2.10324961351382,0,0,0.489963196859816,0.575072826109418,0,0,0,0,0.263772575460388,0.457438218012048,1.56274011167028,0,0,0,0,0,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251308704225729,0,0,0,0,0,0,0,0,0.260240885925407,0.229902104433473,0.360124259610698,0.150704817835715,0.136072998302656,0.384341160854549,0,0,0,0,0.175951124163949,0,0.556094498451196,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.430846795465598,0.477937595905104,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0.18006109403131,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr12:28025584..28025593,- | |short_description=p@chr12:28025584..28025593,- | ||
}} | }} |
Latest revision as of 22:54, 4 August 2015
Short description: | p@chr12:28025584..28025593, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:28025584..28025593, - |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 4.62e-27 | 6 |
CNS neuron (sensu Vertebrata) | 7.48e-13 | 23 |
neuroblast (sensu Vertebrata) | 7.48e-13 | 23 |
neuron | 3.70e-09 | 33 |
neuronal stem cell | 3.70e-09 | 33 |
neuroblast | 3.70e-09 | 33 |
electrically signaling cell | 3.70e-09 | 33 |
electrically responsive cell | 7.68e-08 | 39 |
electrically active cell | 7.68e-08 | 39 |
neural cell | 3.65e-07 | 43 |
striatum neuron | 4.77e-07 | 3 |
ectodermal cell | 5.16e-07 | 44 |
neurectodermal cell | 5.16e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 2.47e-10 | 29 |
regional part of telencephalon | 2.47e-10 | 29 |
telencephalon | 2.47e-10 | 29 |
gray matter | 6.61e-09 | 34 |
cerebral cortex | 2.43e-08 | 21 |
cerebral hemisphere | 2.43e-08 | 21 |
pallium | 2.43e-08 | 21 |
regional part of forebrain | 7.68e-08 | 39 |
forebrain | 7.68e-08 | 39 |
future forebrain | 7.68e-08 | 39 |
anterior neural tube | 1.17e-07 | 40 |
regional part of brain | 9.87e-07 | 46 |