FFCP PHASE1:Hg19::chr1:155940355..155940366,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9181|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=682|TSSclassifier=N|UniProt=|association_with_transcript=487bp_to_ENST00000487755_5end|coexpression_cluster_id=C4|description=CAGE_peak_43_at_ARHGEF2_5end|id=chr1:155940355..155940366,-|ontology_enrichment_celltype=CL:0002057!2.18e-12!42;CL:0000860!2.73e-11!45;CL:0002194!6.73e-09!63;CL:0000576!6.73e-09!63;CL:0000040!6.73e-09!63;CL:0000559!6.73e-09!63;CL:0000766!1.26e-08!76;CL:0002009!1.70e-08!65;CL:0000839!1.34e-07!70;CL:0000557!1.96e-07!71|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005425;7.47e-30;1!UBERON:0003056;6.73e-11;3!UBERON:0006241;9.43e-11;3!UBERON:0003057;9.43e-11;3!UBERON:0006601;1.10e-07;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.37e-27!57;UBERON:0005068!6.37e-27!57;UBERON:0006241!6.37e-27!57;UBERON:0007135!6.37e-27!57;UBERON:0000073!4.87e-21!94;UBERON:0001016!4.87e-21!94;UBERON:0001017!1.15e-20!82;UBERON:0002616!1.26e-19!59;UBERON:0005743!2.41e-19!86;UBERON:0000955!1.00e-18!69;UBERON:0006238!1.00e-18!69;UBERON:0002346!2.98e-18!90;UBERON:0003075!5.05e-18!86;UBERON:0007284!5.05e-18!86;UBERON:0002298!9.39e-17!8;UBERON:0002780!4.06e-16!41;UBERON:0001890!4.06e-16!41;UBERON:0006240!4.06e-16!41;UBERON:0003080!1.25e-15!42;UBERON:0001893!1.64e-15!34;UBERON:0002020!1.98e-15!34;UBERON:0003528!1.98e-15!34;UBERON:0007023!5.62e-14!115;UBERON:0002791!5.90e-14!33;UBERON:0003076!1.52e-13!15;UBERON:0003057!1.52e-13!15;UBERON:0001869!2.93e-12!32;UBERON:0002619!1.36e-11!22;UBERON:0001950!9.35e-11!20;UBERON:0000956!5.71e-10!25;UBERON:0000203!5.71e-10!25;UBERON:0004732!7.19e-10!13;UBERON:0003056!2.04e-09!61;UBERON:0001896!3.30e-09!3;UBERON:0005290!3.30e-09!3;UBERON:0010096!3.30e-09!3;UBERON:0000988!3.39e-09!3;UBERON:0006331!3.48e-09!3;UBERON:0000924!3.88e-09!173;UBERON:0006601!3.88e-09!173;UBERON:0002240!6.62e-09!3;UBERON:0004121!8.13e-09!169;UBERON:0000025!1.14e-08!194;UBERON:0000033!1.83e-08!123;UBERON:0004733!6.38e-08!12;UBERON:0002028!6.38e-08!12;UBERON:0007277!6.38e-08!12;UBERON:0000153!8.85e-08!129;UBERON:0007811!8.85e-08!129;UBERON:0002308!2.67e-07!9;UBERON:0000125!2.67e-07!9;UBERON:0005162!4.50e-07!2;UBERON:0000122!4.50e-07!2;UBERON:0001897!7.05e-07!2|ontology_enrichment_uberon_v019=UBERON:0002298;5.65e-75;6!UBERON:0005162;2.32e-57;2!UBERON:0000122;2.32e-57;2!UBERON:0004732;2.48e-54;13!UBERON:0000988;2.18e-38;3!UBERON:0001896;2.18e-38;3!UBERON:0005290;2.18e-38;3!UBERON:0004733;6.59e-38;12!UBERON:0002028;6.59e-38;12!UBERON:0000941;7.47e-30;1!UBERON:0001785;7.47e-30;1!UBERON:0002464;7.47e-30;1!UBERON:0004904;7.47e-30;1!UBERON:0001021;7.47e-30;1!UBERON:0002336;2.05e-29;1!UBERON:0011215;2.05e-29;1!UBERON:0001018;2.05e-29;1!UBERON:0002473;2.05e-29;1!UBERON:0005340;2.05e-29;1!UBERON:0003544;2.05e-29;1!UBERON:0005970;2.05e-29;1!UBERON:0002316;2.05e-29;1!UBERON:0001020;2.05e-29;1!UBERON:0002437;2.05e-29;1!UBERON:0003714;1.15e-15;2!UBERON:0002148;1.91e-15;2!UBERON:0006331;1.91e-15;2!UBERON:0009662;1.91e-15;2!UBERON:0002680;1.49e-13;9!UBERON:0001895;1.49e-13;9!UBERON:0000073;9.34e-11;53!UBERON:0002616;9.34e-11;53!UBERON:0002240;9.43e-11;3!UBERON:0005174;9.43e-11;3!UBERON:0001137;9.43e-11;3|ontology_enrichment_uberon_v019_2=UBERON:0002298,8.29e-75,6;UBERON:0005162,2.02e-57,2;UBERON:0000122,2.02e-57,2;UBERON:0004732,3.10e-54,13;UBERON:0003076,5.19e-47,15;UBERON:0003057,5.19e-47,15;UBERON:0001896,1.49e-38,3;UBERON:0005290,1.49e-38,3;UBERON:0010096,1.49e-38,3;UBERON:0000988,4.67e-38,3;UBERON:0004733,7.98e-38,12;UBERON:0002028,7.98e-38,12;UBERON:0007277,7.98e-38,12;UBERON:0000941,7.48e-30,1;UBERON:0001785,7.48e-30,1;UBERON:0002464,7.48e-30,1;UBERON:0004904,7.48e-30,1;UBERON:0001021,7.48e-30,1;UBERON:0003902,7.48e-30,1;UBERON:0005425,7.48e-30,1;UBERON:0002336,1.78e-29,1;UBERON:0011215,1.78e-29,1;UBERON:0001018,1.78e-29,1;UBERON:0002473,1.78e-29,1;UBERON:0005340,1.78e-29,1;UBERON:0003544,1.78e-29,1;UBERON:0005970,1.78e-29,1;UBERON:0002316,1.78e-29,1;UBERON:0001020,1.78e-29,1;UBERON:0002437,1.78e-29,1;UBERON:0001049,4.66e-18,56;UBERON:0005068,4.66e-18,56;UBERON:0006241,4.66e-18,56;UBERON:0007135,4.66e-18,56;UBERON:0003075,6.63e-17,82;UBERON:0007284,6.63e-17,82;UBERON:0002346,3.85e-16,86;UBERON:0003714,1.15e-15,2;UBERON:0002148,2.37e-15,2;UBERON:0006331,2.37e-15,2;UBERON:0009662,2.37e-15,2;UBERON:0001016,2.81e-15,89;UBERON:0002680,1.91e-13,9;UBERON:0001895,1.91e-13,9;UBERON:0010092,1.91e-13,9;UBERON:0010371,2.04e-13,104;UBERON:0000073,2.12e-13,53;UBERON:0002616,2.12e-13,53;UBERON:0001017,1.71e-12,81;UBERON:0007023,2.25e-12,114;UBERON:0002240,8.17e-11,3;UBERON:0005174,8.17e-11,3;UBERON:0001137,8.17e-11,3;UBERON:0010314,1.24e-10,132;UBERON:0000955,2.05e-10,68;UBERON:0006238,2.05e-10,68;UBERON:0001781,1.70e-08,4;UBERON:0004121,3.72e-08,171;UBERON:0000924,3.72e-08,171;UBERON:0006601,3.72e-08,171|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9181 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=682 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=487bp_to_ENST00000487755_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_43_at_ARHGEF2_5end | |||
|id=chr1:155940355..155940366,- | |||
|ontology_enrichment_celltype=CL:0002057!2.18e-12!42;CL:0000860!2.73e-11!45;CL:0002194!6.73e-09!63;CL:0000576!6.73e-09!63;CL:0000040!6.73e-09!63;CL:0000559!6.73e-09!63;CL:0000766!1.26e-08!76;CL:0002009!1.70e-08!65;CL:0000839!1.34e-07!70;CL:0000557!1.96e-07!71 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;7.47e-30;1!UBERON:0003056;6.73e-11;3!UBERON:0006241;9.43e-11;3!UBERON:0003057;9.43e-11;3!UBERON:0006601;1.10e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002298;5.65e-75;6!UBERON:0005162;2.32e-57;2!UBERON:0000122;2.32e-57;2!UBERON:0004732;2.48e-54;13!UBERON:0000988;2.18e-38;3!UBERON:0001896;2.18e-38;3!UBERON:0005290;2.18e-38;3!UBERON:0004733;6.59e-38;12!UBERON:0002028;6.59e-38;12!UBERON:0000941;7.47e-30;1!UBERON:0001785;7.47e-30;1!UBERON:0002464;7.47e-30;1!UBERON:0004904;7.47e-30;1!UBERON:0001021;7.47e-30;1!UBERON:0002336;2.05e-29;1!UBERON:0011215;2.05e-29;1!UBERON:0001018;2.05e-29;1!UBERON:0002473;2.05e-29;1!UBERON:0005340;2.05e-29;1!UBERON:0003544;2.05e-29;1!UBERON:0005970;2.05e-29;1!UBERON:0002316;2.05e-29;1!UBERON:0001020;2.05e-29;1!UBERON:0002437;2.05e-29;1!UBERON:0003714;1.15e-15;2!UBERON:0002148;1.91e-15;2!UBERON:0006331;1.91e-15;2!UBERON:0009662;1.91e-15;2!UBERON:0002680;1.49e-13;9!UBERON:0001895;1.49e-13;9!UBERON:0000073;9.34e-11;53!UBERON:0002616;9.34e-11;53!UBERON:0002240;9.43e-11;3!UBERON:0005174;9.43e-11;3!UBERON:0001137;9.43e-11;3 | |||
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|short_description=p43@ARHGEF2 | |||
}} |
Revision as of 00:48, 12 September 2013
Short description: | p43@ARHGEF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_43_at_ARHGEF2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 487bp_to_ENST00000487755_5end |
EntrezGene: | ARHGEF2 |
HGNC: | 682 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.