FFCP PHASE1:Hg19::chr1:66999799..66999852,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84251 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25412 | |||
|TSSclassifier=strong | |||
|UniProt=F8WD01,Q9BQI5 | |||
|association_with_transcript=0bp_to_ENST00000371035,ENST00000468286,NM_032291,uc001dcr.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SGIP1_5end | |||
|id=chr1:66999799..66999852,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.56e-14!180;CL:0000057!8.73e-11!75;CL:0002620!5.95e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.96e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.54e-11,76;CL:0002620,2.93e-07,23 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.11e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!6.21e-33!59;UBERON:0000073!9.92e-33!94;UBERON:0001016!9.92e-33!94;UBERON:0001049!3.36e-32!57;UBERON:0005068!3.36e-32!57;UBERON:0006241!3.36e-32!57;UBERON:0007135!3.36e-32!57;UBERON:0005743!1.26e-31!86;UBERON:0007023!2.84e-31!115;UBERON:0001017!4.35e-30!82;UBERON:0002346!3.29e-29!90;UBERON:0003075!7.87e-29!86;UBERON:0007284!7.87e-29!86;UBERON:0000955!1.65e-26!69;UBERON:0006238!1.65e-26!69;UBERON:0003080!3.76e-26!42;UBERON:0002780!4.49e-26!41;UBERON:0001890!4.49e-26!41;UBERON:0006240!4.49e-26!41;UBERON:0000924!7.89e-24!173;UBERON:0006601!7.89e-24!173;UBERON:0004121!3.23e-23!169;UBERON:0003056!3.24e-23!61;UBERON:0004111!3.51e-23!241;UBERON:0000477!1.45e-22!286;UBERON:0000033!3.49e-22!123;UBERON:0000119!5.40e-22!312;UBERON:0000025!9.05e-22!194;UBERON:0001893!1.35e-21!34;UBERON:0002020!1.49e-21!34;UBERON:0003528!1.49e-21!34;UBERON:0000483!3.41e-21!309;UBERON:0000475!4.44e-21!365;UBERON:0000153!6.58e-21!129;UBERON:0007811!6.58e-21!129;UBERON:0002791!6.66e-21!33;UBERON:0001869!1.94e-20!32;UBERON:0000468!2.46e-17!659;UBERON:0000956!7.20e-16!25;UBERON:0000203!7.20e-16!25;UBERON:0002619!7.45e-16!22;UBERON:0000481!1.18e-15!347;UBERON:0001950!1.56e-14!20;UBERON:0000467!5.42e-14!625;UBERON:0000480!9.39e-14!626;UBERON:0002049!1.65e-09!79;UBERON:0007798!1.65e-09!79;UBERON:0000914!4.63e-09!83;UBERON:0002329!4.63e-09!83;UBERON:0003077!4.63e-09!83;UBERON:0003059!4.63e-09!83;UBERON:0007282!4.63e-09!83;UBERON:0009618!4.63e-09!83;UBERON:0007285!4.63e-09!83;UBERON:0000922!4.82e-09!612;UBERON:0000064!6.42e-09!219;UBERON:0002050!1.41e-08!605;UBERON:0005423!1.41e-08!605;UBERON:0000923!1.72e-08!604;UBERON:0005291!1.72e-08!604;UBERON:0006598!1.72e-08!604;UBERON:0002532!1.72e-08!604;UBERON:0004290!1.07e-07!70;UBERON:0005256!1.57e-07!143;UBERON:0003076!2.53e-07!15;UBERON:0003057!2.53e-07!15;UBERON:0002420!2.63e-07!9;UBERON:0007245!2.63e-07!9;UBERON:0010009!2.63e-07!9;UBERON:0010011!2.63e-07!9;UBERON:0000454!2.63e-07!9;UBERON:0002308!3.72e-07!9;UBERON:0000125!3.72e-07!9;UBERON:0000055!4.79e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.78e-20;41!UBERON:0001890;7.78e-20;41!UBERON:0001893;1.31e-19;34!UBERON:0003528;1.70e-19;34!UBERON:0002020;1.70e-19;34!UBERON:0001869;1.97e-19;32!UBERON:0002791;2.48e-19;32!UBERON:0000073;4.85e-18;53!UBERON:0002616;4.85e-18;53!UBERON:0000956;1.20e-16;25!UBERON:0000203;1.20e-16;25!UBERON:0002619;1.21e-16;22!UBERON:0001950;3.03e-15;20!UBERON:0001017;2.64e-13;75!UBERON:0000955;3.24e-13;68!UBERON:0001016;1.19e-11;83!UBERON:0007023;2.15e-09;114!UBERON:0002420;1.23e-07;9!UBERON:0007245;1.23e-07;9!UBERON:0010009;1.23e-07;9!UBERON:0010011;1.23e-07;9!UBERON:0000454;1.23e-07;9!UBERON:0000125;1.78e-07;9!UBERON:0002308;1.78e-07;9!UBERON:0011216;2.22e-07;132!UBERON:0010314;5.97e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.12e-32,56;UBERON:0005068,1.12e-32,56;UBERON:0006241,1.12e-32,56;UBERON:0007135,1.12e-32,56;UBERON:0002346,1.66e-32,86;UBERON:0001016,3.20e-32,89;UBERON:0003075,4.66e-32,82;UBERON:0007284,4.66e-32,82;UBERON:0007023,3.97e-31,114;UBERON:0001017,5.68e-31,81;UBERON:0000073,9.25e-31,53;UBERON:0002616,9.25e-31,53;UBERON:0010314,8.82e-29,132;UBERON:0002780,1.80e-27,41;UBERON:0001890,1.80e-27,41;UBERON:0003080,1.80e-27,41;UBERON:0006240,1.80e-27,41;UBERON:0000955,3.41e-27,68;UBERON:0006238,3.41e-27,68;UBERON:0004121,1.15e-25,171;UBERON:0000924,1.15e-25,171;UBERON:0006601,1.15e-25,171;UBERON:0003056,3.13e-25,61;UBERON:0010371,8.87e-23,104;UBERON:0001893,9.81e-23,34;UBERON:0003528,1.08e-22,34;UBERON:0002020,1.08e-22,34;UBERON:0004111,1.81e-22,240;UBERON:0000119,3.38e-22,309;UBERON:0001869,1.64e-21,32;UBERON:0002791,2.16e-21,32;UBERON:0000483,2.28e-21,306;UBERON:0000025,2.22e-20,192;UBERON:0000956,1.11e-16,25;UBERON:0000203,1.11e-16,25;UBERON:0002619,1.15e-16,22;UBERON:0001950,2.87e-15,20;UBERON:0011216,1.02e-13,223;UBERON:0005423,7.06e-10,581;UBERON:0000922,2.15e-09,592;UBERON:0000923,2.60e-09,560;UBERON:0010316,2.60e-09,560;UBERON:0005291,2.60e-09,560;UBERON:0006598,2.60e-09,560;UBERON:0010317,2.60e-09,560;UBERON:0002532,2.60e-09,560;UBERON:0002050,6.59e-09,564;UBERON:0002049,7.96e-09,78;UBERON:0007798,7.96e-09,78;UBERON:0007524,3.12e-08,73;UBERON:0003077,6.33e-08,72;UBERON:0007285,6.33e-08,72;UBERON:0007503,8.97e-08,78;UBERON:0002420,1.24e-07,9;UBERON:0007245,1.24e-07,9;UBERON:0010009,1.24e-07,9;UBERON:0010011,1.24e-07,9;UBERON:0000454,1.24e-07,9;UBERON:0002329,1.70e-07,71;UBERON:0003059,1.70e-07,71;UBERON:0007282,1.70e-07,71;UBERON:0004290,1.70e-07,71;UBERON:0009618,1.70e-07,71;UBERON:0000125,1.79e-07,9;UBERON:0002308,1.79e-07,9 | |||
|phase1_expression=3.45188920614058,0.856402095563933,0.422863212287913,0,3.5756887554183,1.74467704820074,5.06599756336621,3.79031924056099,0.261185628199839,1.47440361900905,0,0,0.527533956456907,6.31208400096238,5.96515276310248,10.7572023432284,5.42425075221579,10.9546513558106,4.39139518911456,2.83178433576612,0.816002764977012,0.626909442956176,10.5907315238491,3.42186062682211,20.5889928935477,0,0,0,0.786728553697808,0.383829398097213,0.77408061658038,0,0,0.369754010166788,0,0,3.81680571135301,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545812300115692,0,0,0.641858054152187,0.639337125799041,0,0.398927315243264,0,0,0,0,0.251248665256743,0,0,3.02699751316684,0.368277635987565,0,0,0.212604299965044,0.209658645508376,0,0.300353785683013,0.64290234678832,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,22.4691258584344,35.8725480308183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741432815810302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.383587685530591,0,10.0267582127178,1.30361867064741,54.8747303465259,15.5723158496843,4.06499713805492,1.33037638477538,3.24988707064566,33.4651537896656,0,0,0,0,0,0,0,0,11.3294572199022,0.860234595106124,6.2485290289367,3.95715559346807,1.25849830862972,0.275118041940067,3.13492449805216,14.7297552726517,18.8556119223956,46.1914445615245,9.66790361061953,10.6438094800592,24.8943298699133,1.10298924103761,4.0507097394088,23.5751282669971,7.18493992403743,11.4863710092989,4.5994991239765,1.89853131913626,2.01521918323448,0,0,0,32.800148811891,10.8902240031539,26.7466545242702,7.45775213946916,2.83734705758686,0,2.1349799145941,0.49333509683432,2.17847724779836,8.08264032418128,6.86539993076527,40.4124331811967,29.9611480729599,38.6630362525764,14.0472034573644,7.98660550162229,16.1404574995945,17.7326092952085,9.06488488461537,8.84840082224166,36.1352883121161,34.0251058953597,20.25185311045,36.8280885757437,23.7376252107415,31.8556476678309,40.2426159417094,25.9237615489262,24.272992855161,45.438514939406,11.4134181429018,7.96868269077451,15.6247581262861,2.7223723958405,16.6832361190642,12.813443329114,6.35795703478686,36.6111137222971,27.1028151897094,29.3710215652017,17.3088676388379,16.7088568918854,5.45647228902712,29.0298840380732,20.1589278026636,8.08230284094059,19.1705179958972,8.06016785821122,10.6823173155607,0,0.272746120590835,0,0.487894824518382,0.662648841607426,2.78865462886844,3.31715376049185,1.26160425437814,0.36497735907583,12.5159625863853,7.07565032012174,6.90674606762403,21.825292617503,18.0469870417396,0,0,0,0,0,0,0,0,0,2.21446636387394,11.2193419042757,2.4694440679884,0,0,0,1.18157981336281,0,0,6.6911446016425,0,0,0,0.370353780634118,7.49359102213747,5.19967392639789,1.44331342025273,7.76733713333015,8.21860859650752,28.7289231044537,22.6862901162539,39.9533719692656,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0.290633938513962,0.383382679165211,11.3312544716067,6.16339038092582,25.7086863270557,7.20599767084807,15.7803041782975,11.8741062326356,1.90994212779139,9.37739577680376,1.71072446022705,5.14137463516618,7.50857644609794,12.2905366031149,30.8360481949742,6.5394010324992,16.20776116643,47.4427196831044,0,10.143633030672,89.8870834056862,54.0838671939104,7.9734286021264,1.41849132023278,6.92697665441858,28.5955987316295,0.542621605391443,6.58592269424615,7.49193223875591,13.8602860009593,3.95975936466715,0,0,0,0,0,0,22.2851115607172,10.3375742250703,4.27910715122155,39.8148593335843,9.24643451476725,1.25342674267927,0,0,0,0,6.86055485400651,50.7545430044725,10.8260433788877,15.7465289414288,14.6725912880228,0,0,0.414415513436035,4.53958519360818,6.5022167737758,8.4092157346918,13.1021642764408,13.20374517099,5.67728694122165,7.61419197452636,11.736897889381,9.09630016223939,5.17365356462525,5.97803038681893,3.13427586520895,38.3156739804245,18.9927122738858,5.49029478097369,0,0,0,0,3.32870879020994,0.604780586659361,8.43566546583841,9.97502826372406,1.68396056659844,1.53766979106841,5.62877973973374,0.965123526861645,1.48418066444991,6.63101683351419,7.63515418846446,5.25613798488379,15.058378446325,4.18357362455853,0,0,0,6.65923799354719,28.5883133770546,27.0116294816414,11.7311899355927,15.788144106405,11.7652465376528,7.30696123266303,14.0383666427525,5.68666920354483,2.89159298970077,6.69339339916632,18.5072703228347,7.04460737614017,6.52196706011309,9.17554582962138,16.6215201785745,6.49236788694317,2.63111851975121,2.87578996127391,16.6692581325653,14.4326444107871,20.8242172585154,13.3953315142039,0,0,4.59412430396938,0.650060246036521,3.21367859688319,8.02366961824612,5.85384745035649,4.91211759123615,7.44317491416465,19.7653250557623,7.68588477745411,7.15903670295248,3.65031346151623,0,0,0.765676274967505,0,4.64845549297286,21.0924272376529,6.2733354314454,2.46426864140871,4.25844824253617,4.34966496037536,5.18907813490976,2.57624796135584,39.0766287827651,48.7224314066838,33.5509141305932,21.7513122614634,2.1396949401696,3.18203247925937,1.56989728039846,59.8975283752438,31.0226843601742,27.21466494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| |||
|short_description=p1@SGIP1 | |||
}} |
Revision as of 18:58, 10 January 2014
Short description: | p1@SGIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SGIP1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000371035, ENST00000468286, NM_032291, uc001dcr.2_5end |
EntrezGene: | SGIP1 |
HGNC: | 25412 |
UniProt: | F8WD01Q9BQI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.54e-11 | 76 |
skin fibroblast | 2.93e-07 | 23 |