FFCP PHASE1:Hg19::chr14:27067287..27067306,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4857 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7886 | |||
|TSSclassifier=weak | |||
|UniProt=P51513,D3DS81 | |||
|association_with_transcript=-327bp_to_ENST00000539517,NM_002515,NM_006489,NM_006491,uc001wpy.2,uc001wpz.2,uc001wqa.2,uc001wqb.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_NOVA1_5end | |||
|id=chr14:27067287..27067306,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.44e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!5.48e-39!86;UBERON:0007284!5.48e-39!86;UBERON:0000073!5.91e-39!94;UBERON:0001016!5.91e-39!94;UBERON:0005743!1.30e-38!86;UBERON:0002346!3.82e-38!90;UBERON:0001017!8.93e-38!82;UBERON:0001049!2.19e-37!57;UBERON:0005068!2.19e-37!57;UBERON:0006241!2.19e-37!57;UBERON:0007135!2.19e-37!57;UBERON:0007023!1.08e-34!115;UBERON:0002616!2.93e-32!59;UBERON:0000955!1.04e-31!69;UBERON:0006238!1.04e-31!69;UBERON:0003080!4.16e-29!42;UBERON:0002780!2.04e-28!41;UBERON:0001890!2.04e-28!41;UBERON:0006240!2.04e-28!41;UBERON:0003056!8.70e-28!61;UBERON:0004121!9.57e-28!169;UBERON:0000924!1.09e-27!173;UBERON:0006601!1.09e-27!173;UBERON:0000033!1.18e-26!123;UBERON:0000153!1.97e-26!129;UBERON:0007811!1.97e-26!129;UBERON:0002020!3.37e-24!34;UBERON:0003528!3.37e-24!34;UBERON:0001893!4.11e-24!34;UBERON:0002791!2.09e-23!33;UBERON:0001869!6.99e-23!32;UBERON:0000119!3.49e-21!312;UBERON:0000483!6.29e-21!309;UBERON:0000481!7.21e-19!347;UBERON:0000475!1.75e-18!365;UBERON:0000956!5.23e-18!25;UBERON:0000203!5.23e-18!25;UBERON:0002619!1.09e-17!22;UBERON:0001950!2.27e-16!20;UBERON:0000025!3.90e-15!194;UBERON:0004111!1.07e-13!241;UBERON:0000477!1.72e-13!286;UBERON:0000922!2.81e-12!612;UBERON:0000468!5.60e-11!659;UBERON:0002050!1.51e-10!605;UBERON:0005423!1.51e-10!605;UBERON:0000923!3.30e-10!604;UBERON:0005291!3.30e-10!604;UBERON:0006598!3.30e-10!604;UBERON:0002532!3.30e-10!604;UBERON:0003076!2.54e-09!15;UBERON:0003057!2.54e-09!15;UBERON:0000064!4.72e-09!219;UBERON:0000467!1.45e-08!625;UBERON:0000480!2.04e-08!626;UBERON:0004732!4.54e-08!13;UBERON:0002420!1.12e-07!9;UBERON:0007245!1.12e-07!9;UBERON:0010009!1.12e-07!9;UBERON:0010011!1.12e-07!9;UBERON:0000454!1.12e-07!9;UBERON:0002308!1.24e-07!9;UBERON:0000125!1.24e-07!9;UBERON:0004733!2.15e-07!12;UBERON:0002028!2.15e-07!12;UBERON:0007277!2.15e-07!12;UBERON:0001871!4.66e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.04e-27;34!UBERON:0002020;2.04e-27;34!UBERON:0001869;2.19e-27;32!UBERON:0001893;2.55e-27;34!UBERON:0002791;2.95e-27;32!UBERON:0002780;4.89e-27;41!UBERON:0001890;4.89e-27;41!UBERON:0000073;4.07e-24;53!UBERON:0002616;4.07e-24;53!UBERON:0000956;1.07e-23;25!UBERON:0000203;1.07e-23;25!UBERON:0002619;4.50e-23;22!UBERON:0001950;2.64e-21;20!UBERON:0001017;5.37e-18;75!UBERON:0000955;7.76e-17;68!UBERON:0001016;4.35e-16;83!UBERON:0007023;3.06e-12;114!UBERON:0002420;1.02e-09;9!UBERON:0007245;1.02e-09;9!UBERON:0010009;1.02e-09;9!UBERON:0010011;1.02e-09;9!UBERON:0000454;1.02e-09;9!UBERON:0000125;1.12e-09;9!UBERON:0002308;1.12e-09;9!UBERON:0011216;1.80e-08;132!UBERON:0001871;8.17e-08;6!UBERON:0009663;8.17e-08;7!UBERON:0000200;1.79e-07;6!UBERON:0004732;2.98e-07;13!UBERON:0001894;3.74e-07;7!UBERON:0010314;4.46e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.40e-45,56;UBERON:0005068,9.40e-45,56;UBERON:0006241,9.40e-45,56;UBERON:0007135,9.40e-45,56;UBERON:0003075,1.29e-43,82;UBERON:0007284,1.29e-43,82;UBERON:0001016,3.39e-43,89;UBERON:0001017,1.45e-42,81;UBERON:0000073,5.64e-42,53;UBERON:0002616,5.64e-42,53;UBERON:0002346,1.31e-41,86;UBERON:0007023,3.99e-41,114;UBERON:0010314,4.33e-38,132;UBERON:0002780,2.57e-37,41;UBERON:0001890,2.57e-37,41;UBERON:0003080,2.57e-37,41;UBERON:0006240,2.57e-37,41;UBERON:0000955,2.45e-36,68;UBERON:0006238,2.45e-36,68;UBERON:0010371,4.84e-33,104;UBERON:0003056,4.92e-32,61;UBERON:0003528,1.08e-31,34;UBERON:0002020,1.08e-31,34;UBERON:0001893,1.41e-31,34;UBERON:0004121,5.32e-30,171;UBERON:0000924,5.32e-30,171;UBERON:0006601,5.32e-30,171;UBERON:0001869,6.18e-30,32;UBERON:0002791,8.88e-30,32;UBERON:0000956,1.94e-23,25;UBERON:0000203,1.94e-23,25;UBERON:0002619,5.16e-23,22;UBERON:0011216,9.59e-23,223;UBERON:0001950,2.95e-21,20;UBERON:0000483,1.16e-14,306;UBERON:0000119,3.68e-14,309;UBERON:0000025,9.91e-12,192;UBERON:0004111,2.70e-11,240;UBERON:0000922,6.81e-11,592;UBERON:0002050,4.86e-10,564;UBERON:0000923,5.37e-10,560;UBERON:0010316,5.37e-10,560;UBERON:0005291,5.37e-10,560;UBERON:0006598,5.37e-10,560;UBERON:0010317,5.37e-10,560;UBERON:0002532,5.37e-10,560;UBERON:0005423,8.52e-10,581;UBERON:0002420,1.07e-09,9;UBERON:0007245,1.07e-09,9;UBERON:0010009,1.07e-09,9;UBERON:0010011,1.07e-09,9;UBERON:0000454,1.07e-09,9;UBERON:0000125,1.22e-09,9;UBERON:0002308,1.22e-09,9;UBERON:0003076,7.45e-09,15;UBERON:0003057,7.45e-09,15;UBERON:0001871,7.83e-08,6;UBERON:0009663,8.65e-08,7;UBERON:0000200,1.84e-07,6;UBERON:0004732,2.80e-07,13;UBERON:0001894,4.41e-07,7;UBERON:0006222,4.41e-07,7 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,2.52687949370732,7.05201196139564,0.491467873003018,0,0,0,0.74259811776028,1.65698687863958,0,0.602694528023977,0,0.487932798790507,0.61560529038394,0.816002764977012,0.940364164434263,1.43117993565528,1.36874425072884,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.255725123687061,0,0,0.434539556882471,0,0,4.53767122387526,4.65631734671384,2.0202000709419,2.88153966094968,0,0,0,0,0,0,0,0,0.39752481473341,0,0.694281003215189,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0,0,0.625098097988558,1.12264686313085,0.563057402416611,0,0,0,0,0,0,0,0.25326102332916,1.05927344650575,1.14734648299525,0.709336764396714,1.68203280042692,0,0,5.29058760179603,1.21239604862719,4.90385709340376,0.605429710579726,0,3.04617861383936,1.5608003841516,2.85235910772225,1.79338416662161,1.29177948508141,1.13311061057692,1.26405726032024,2.04154171254893,0.245668634623536,5.16628905878827,0,0.494533858557114,1.82032272387605,0.718618141816238,0.841680569770331,2.12701483782339,1.93944880838928,0,0,0.150238058906597,1.02088964844019,0.179389635688862,0,0.423863802319124,0,0,0,0,0,0,0,0.368199594569197,1.13152239773168,0,0.10075209822764,0.508681776931463,0,0,0,1.09776335516636,1.32529768321485,0.813357600086629,1.96956004529204,1.51392510525377,0.72995471815166,0,3.21620469096443,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.2347220339942,0,1.26755034821831,0,0,0.441463099414651,0,0.514703430895577,0,0,0,0.277765335475589,2.28065813717227,1.03993478527958,1.44331342025273,1.85488647960123,1.05667824812239,0,0,0,1.58040879591855,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0.224262168690721,0.87192013766656,0.22001485746285,0,3.57656445851882,2.535908257668,0,0,0.257207374262142,0,0.532844358032199,1.28680194292333,0,0,0.325736184293735,0.355391948742546,0,0.602878754119172,0,0.699810938274399,0,0,0,0.479249710983165,2.29723871668228,1.42636905040718,0.144781306667579,1.43833425785268,0,0,0,0,0,14.7374882049029,10.4111883086097,1.54657762555539,2.68026024534958,1.27587750330633,0,0,0,1.2269149171914,0.500170521059677,0.813795071099207,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,1.91143951829782,0.195801157462741,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0.771048469013278,1.06537035187876,1.8067974323038,3.11552657510173,1.85936605535935,0,0,0,0.918515585316854,1.27463817604702,1.31124414959424,0,0.0770153371044148,0.784349769176855,0,0.316654886678627,0,0,0.431831832204279,0,0.270946437543853,1.00337954770971,0,0,0.223874754722178,0,0,0.769350375349168,0.984043937099117,0.976135183992909,0,0,0,0,0,0,1.54673149267395,4.00526404498075,4.29810289233163,0.137836572484531,1.82614416276065,2.46528379654188,2.21589231281862,0.979352392114111,0,0,0,0.2023155617111,0,1.25924938732256,1.3940745403212,2.46426864140871,0.532306030317022,1.73986598415015,0.18532421910392,0,0.372158369359667,0,0.190630193923825,0.511795582622668,1.28381696410176,0.318203247925937,0,0.539617372749944,1.09814811894422,1.41374882814824,0,0,0.421258456238981,5.85160486907508,0.243713489631284,1.05650146756755,0.545999645631943,1.55545975149084,2.26016233240486,0.551365343546124,0,0.876901770507525,1.15755106853338,3.9353685122798,0,0,0,0,0,0,1.41904425628239,0.844430541190656,1.31717957183961,0.75894634753143,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,20.2120769605305,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,1.23087398947712,0,0,0,0,6.73937624650712,1.33496573924465,0,0,0,0,0,10.9356241254293,11.534892145662,0.556543525114529,0,1.90012867315194,0.996239941255349,1.38141957765574,0,6.3406583151336,3.93871377475422,0,0,0.537063524026827,0,2.17015492401254,0,0,6.78532922266653,10.3900269941273,9.98068990005971,0,0.349839999984783,7.97499532978273,0.1137934482855,0,0,1.03423011972439,0,6.94499979733169,11.5146380155799,8.80354001965478,18.30980835805,23.1110653256259,14.7773809476774,11.6274260491605,0,0,6.46382171431895,0.113942055847001,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,5.62610463329437,0,1.59223616106011,1.22206028986725,2.96521128680622,1.11207545051853,1.14864144456001,6.94231669700974,4.81546588379273,6.09087558885882,0,0,0,1.97292201424695,3.62972148145992,3.97894590119637,1.95878396848313,0,0,0.664653872707185,0,0,0,1.42304773014896,0,0,0,0,2.97035336011451,0.51595809741485,0,0,0,1.26085721434945,0.970817393606503,2.03382666702479,0,0,12.9154023749993,0,0,1.49417096317547,0,0,0,6.52060991875465,0,2.48505071130865,0,0,0,0,2.02265412931063,7.20504346451747,7.9405119757356,0,1.28929632425987,1.8402114799552,2.79282401272254,2.06244381610515,7.89660327034495,0,0.429226048136571,1.56220020209311,1.94832070211506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| |||
|short_description=p4@NOVA1 | |||
}} |
Revision as of 19:32, 11 January 2014
Short description: | p4@NOVA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NOVA1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -327bp_to_ENST00000539517, NM_002515, NM_006489, NM_006491, uc001wpy.2, uc001wpz.2, uc001wqa.2, uc001wqb.2_5end |
EntrezGene: | NOVA1 |
HGNC: | 7886 |
UniProt: | P51513D3DS81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data