FFCP PHASE1:Hg19::chr17:1090314..1090330,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=81 | |||
|TSSclassifier=not | |||
|UniProt=F5H8B3 | |||
|association_with_transcript=285bp_to_ENST00000544583,NM_001159746,uc002fse.2_5end | |||
|description=CAGE_peak_19_at_ABR_5end | |||
|id=chr17:1090314..1090330,- | |||
|ontology_enrichment_celltype=CL:0000147!4.61e-14!14;CL:0000325!4.89e-09!39;CL:0000148!7.13e-09!10;CL:0000541!7.13e-09!10;CL:0000149!2.07e-07!4;CL:0002567!6.12e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002567;3.72e-19;3!CL:0000148;3.88e-15;10!CL:0000147;9.35e-11;14!CL:0000710;1.86e-07;20!CL:0002566;2.34e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,3.99e-19,3;CL:0000148,4.27e-15,10;CL:0000541,4.27e-15,10;CL:0000147,1.00e-10,14;CL:0002566,1.51e-07,1;CL:0000710,1.94e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.35e-10;82!UBERON:0006241;5.49e-09;3!UBERON:0003057;5.49e-09;3!UBERON:0006222;2.34e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.60e-13;2!DOID:178;2.34e-07;1!DOID:326;2.34e-07;1!DOID:3978;2.34e-07;1!DOID:3394;2.34e-07;1!DOID:5844;2.34e-07;1!DOID:1287;3.51e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.34e-13,2;DOID:178,3.20e-07,1;DOID:326,3.20e-07,1;DOID:3978,3.20e-07,1;DOID:3394,3.20e-07,1;DOID:5844,3.20e-07,1;DOID:1287,4.22e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.37e-53!115;UBERON:0001049!3.20e-46!57;UBERON:0005068!3.20e-46!57;UBERON:0006241!3.20e-46!57;UBERON:0007135!3.20e-46!57;UBERON:0005743!3.33e-41!86;UBERON:0003075!5.36e-41!86;UBERON:0007284!5.36e-41!86;UBERON:0002346!1.79e-38!90;UBERON:0002616!3.31e-37!59;UBERON:0001017!3.76e-36!82;UBERON:0000073!7.53e-36!94;UBERON:0001016!7.53e-36!94;UBERON:0000955!1.97e-33!69;UBERON:0006238!1.97e-33!69;UBERON:0002780!1.39e-32!41;UBERON:0001890!1.39e-32!41;UBERON:0006240!1.39e-32!41;UBERON:0003080!1.37e-31!42;UBERON:0001893!5.03e-30!34;UBERON:0002020!8.93e-30!34;UBERON:0003528!8.93e-30!34;UBERON:0003056!1.12e-28!61;UBERON:0002791!2.30e-28!33;UBERON:0001869!8.20e-27!32;UBERON:0000033!8.04e-24!123;UBERON:0000153!4.16e-23!129;UBERON:0007811!4.16e-23!129;UBERON:0002619!1.14e-22!22;UBERON:0001950!1.44e-19!20;UBERON:0000956!2.16e-19!25;UBERON:0000203!2.16e-19!25;UBERON:0004121!2.68e-18!169;UBERON:0000924!1.63e-17!173;UBERON:0006601!1.63e-17!173;UBERON:0003076!1.47e-15!15;UBERON:0003057!1.47e-15!15;UBERON:0002308!3.21e-12!9;UBERON:0000125!3.21e-12!9;UBERON:0002298!1.70e-11!8;UBERON:0004733!3.18e-11!12;UBERON:0002028!3.18e-11!12;UBERON:0007277!3.18e-11!12;UBERON:0000200!3.59e-11!6;UBERON:0004732!3.39e-10!13;UBERON:0000475!9.15e-10!365;UBERON:0000025!1.99e-09!194;UBERON:0002420!2.81e-09!9;UBERON:0007245!2.81e-09!9;UBERON:0010009!2.81e-09!9;UBERON:0010011!2.81e-09!9;UBERON:0000454!2.81e-09!9;UBERON:0009663!5.01e-09!7;UBERON:0000064!1.35e-08!219;UBERON:0004111!1.55e-07!241;UBERON:0002680!6.59e-07!9;UBERON:0001895!6.59e-07!9;UBERON:0010092!6.59e-07!9;UBERON:0001872!7.75e-07!5;UBERON:0000988!8.76e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.89e-27;34!UBERON:0002619;1.01e-24;22!UBERON:0003528;7.47e-24;34!UBERON:0002020;7.47e-24;34!UBERON:0002780;1.21e-23;41!UBERON:0001890;1.21e-23;41!UBERON:0001869;1.25e-22;32!UBERON:0001950;4.38e-22;20!UBERON:0002791;7.11e-22;32!UBERON:0000956;1.14e-21;25!UBERON:0000203;1.14e-21;25!UBERON:0000073;7.07e-20;53!UBERON:0002616;7.07e-20;53!UBERON:0002298;1.56e-16;6!UBERON:0001017;2.15e-14;75!UBERON:0000955;4.79e-14;68!UBERON:0001872;1.18e-11;5!UBERON:0007023;1.59e-11;114!UBERON:0001016;6.51e-11;83!UBERON:0000200;5.51e-10;6!UBERON:0000988;3.04e-09;3!UBERON:0001896;5.49e-09;3!UBERON:0001870;5.49e-09;3!UBERON:0002240;5.49e-09;3!UBERON:0005174;5.49e-09;3!UBERON:0005290;5.49e-09;3!UBERON:0001137;5.49e-09;3!UBERON:0004733;2.46e-08;12!UBERON:0002028;2.46e-08;12!UBERON:0002581;9.37e-08;1!UBERON:0002336;9.37e-08;1!UBERON:0011215;9.37e-08;1!UBERON:0001018;9.37e-08;1!UBERON:0002473;9.37e-08;1!UBERON:0005340;9.37e-08;1!UBERON:0003544;9.37e-08;1!UBERON:0005970;9.37e-08;1!UBERON:0002316;9.37e-08;1!UBERON:0001020;9.37e-08;1!UBERON:0007190;9.37e-08;1!UBERON:0002437;9.37e-08;1!UBERON:0004732;1.06e-07;13!UBERON:0002902;2.34e-07;1!UBERON:0002038;2.34e-07;1!UBERON:0003112;2.34e-07;1!UBERON:0011158;2.34e-07;1!UBERON:0009661;2.34e-07;1!UBERON:0002950;2.34e-07;1!UBERON:0009899;2.34e-07;1!UBERON:0003128;2.34e-07;1!UBERON:0001891;2.34e-07;1!UBERON:0001703;2.34e-07;1!UBERON:0002241;2.34e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.31e-43,56;UBERON:0005068,5.31e-43,56;UBERON:0006241,5.31e-43,56;UBERON:0007135,5.31e-43,56;UBERON:0000073,4.14e-37,53;UBERON:0002616,4.14e-37,53;UBERON:0000955,2.43e-34,68;UBERON:0006238,2.43e-34,68;UBERON:0001017,2.50e-34,81;UBERON:0001893,1.51e-31,34;UBERON:0007023,3.27e-31,114;UBERON:0001016,1.63e-30,89;UBERON:0002780,9.20e-30,41;UBERON:0001890,9.20e-30,41;UBERON:0003080,9.20e-30,41;UBERON:0006240,9.20e-30,41;UBERON:0003075,3.55e-28,82;UBERON:0007284,3.55e-28,82;UBERON:0003528,5.63e-27,34;UBERON:0002020,5.63e-27,34;UBERON:0002346,1.11e-26,86;UBERON:0002619,5.26e-25,22;UBERON:0001869,1.69e-24,32;UBERON:0002791,2.39e-24,32;UBERON:0001950,2.49e-22,20;UBERON:0000956,6.43e-22,25;UBERON:0000203,6.43e-22,25;UBERON:0010371,2.31e-21,104;UBERON:0003056,3.63e-19,61;UBERON:0010314,1.07e-17,132;UBERON:0002298,8.03e-17,6;UBERON:0003076,3.61e-14,15;UBERON:0003057,3.61e-14,15;UBERON:0004121,6.38e-14,171;UBERON:0000924,6.38e-14,171;UBERON:0006601,6.38e-14,171;UBERON:0001872,6.95e-12,5;UBERON:0011216,1.19e-10,223;UBERON:0000200,4.21e-10,6;UBERON:0000025,1.20e-09,192;UBERON:0000988,1.82e-09,3;UBERON:0001870,3.82e-09,3;UBERON:0001896,4.68e-09,3;UBERON:0005290,4.68e-09,3;UBERON:0010096,4.68e-09,3;UBERON:0002240,7.91e-09,3;UBERON:0005174,7.91e-09,3;UBERON:0001137,7.91e-09,3;UBERON:0004733,1.79e-08,12;UBERON:0002028,1.79e-08,12;UBERON:0007277,1.79e-08,12;UBERON:0004732,7.93e-08,13;UBERON:0002581,9.10e-08,1;UBERON:0007190,9.71e-08,1;UBERON:0002336,1.03e-07,1;UBERON:0011215,1.03e-07,1;UBERON:0001018,1.03e-07,1;UBERON:0002473,1.03e-07,1;UBERON:0005340,1.03e-07,1;UBERON:0003544,1.03e-07,1;UBERON:0005970,1.03e-07,1;UBERON:0002316,1.03e-07,1;UBERON:0001020,1.03e-07,1;UBERON:0002437,1.03e-07,1;UBERON:0002902,1.42e-07,1;UBERON:0009899,1.42e-07,1;UBERON:0002038,2.66e-07,1;UBERON:0009661,2.66e-07,1;UBERON:0002950,2.66e-07,1;UBERON:0001891,2.66e-07,1;UBERON:0009616,2.66e-07,1;UBERON:0010286,2.66e-07,1;UBERON:0003112,4.34e-07,1;UBERON:0011158,4.34e-07,1;UBERON:0003128,4.34e-07,1;UBERON:0001703,4.34e-07,1;UBERON:0002241,4.34e-07,1;UBERON:0004761,4.34e-07,1;UBERON:0009617,4.34e-07,1;UBERON:0004111,7.03e-07,240 | |||
|phase1_expression=0.908391896352783,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71444314588856,3.4378958300245,1.17217447210047,1.71072446022705,0.719792448923265,0.600686115687835,1.14330573052231,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0.328014645699706,0.650756789328606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,1.1253553312841,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,3.87733098438087,1.11321717794222,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.442317039724898,0.591095237907095,0.438770794307945,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15683625538167,0,1.40558667435203,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.193978032976839,0.706049013532002,0,0,0,1.32952671507345,0,0,0.426905989478705,0,0,0,0,0,0.124252535565433,0,0,0,0,0,1.20084057741958,0.410716136675979,0,0,0,0.279282401272254,0,0,1.19807400299395,3.43380838509257,1.56220020209311,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,1.49823746722733,0,0,0,0,0,0.728994679896296,0,0,0,0,0,0,0,0.662091970365432,0.76280561296425,0,0,0,0,0,0,0,0,0,1.93924434542326,0.66116300871345,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0.655745261419609,0,1.77213635993397,0.244052529803926,0.751145584238999,1.14681839138014,0.554645257684261,1.98708489412427,0,0,0,0,0,0,0,0.149254802886874,0,0,1.32582103692562,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,4.25089728976755,0.159633859057151,0.615349092722265,0,1.72893131160545,1.13032951942296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22874029240702,1.56215619722769,0.826747186004736,1.77564268542939,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0,0,0,2.58284985311961,2.23627430113687,0,0,0.706437835654626,0.942693539496011,0,0,0,0,0.857718530119876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17785080268967,0.297046400327086,1.2679671827502,0,0,0,0,0,0,0,0,0,1.29005624836306,0,1.42782129400921,0.436350690340377,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.620597975171371,0.213233981900981,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p19@ABR | |||
}} |
Revision as of 12:57, 20 January 2014
Short description: | p19@ABR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_ABR_5end |
Coexpression cluster: | NA |
Association with transcript: | 285bp_to_ENST00000544583, NM_001159746, uc002fse.2_5end |
EntrezGene: | ABR |
HGNC: | 81 |
UniProt: | F5H8B3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 3.99e-19 | 3 |
melanocyte | 4.27e-15 | 10 |
melanoblast | 4.27e-15 | 10 |
pigment cell | 1.00e-10 | 14 |
dark melanocyte | 1.51e-07 | 1 |
neurecto-epithelial cell | 1.94e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.34e-13 | 2 |
vascular disease | 3.20e-07 | 1 |
ischemia | 3.20e-07 | 1 |
extrinsic cardiomyopathy | 3.20e-07 | 1 |
myocardial ischemia | 3.20e-07 | 1 |
myocardial infarction | 3.20e-07 | 1 |
cardiovascular system disease | 4.22e-07 | 4 |