FFCP PHASE1:Hg19::chr4:145662551..145662554,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:145662551..145662554,+ | |||
|coexpression_cluster_id=C606 | |coexpression_cluster_id=C606 | ||
|description=CAGE_peak_at_chr4:145662551..145662554,+ | |description=CAGE_peak_at_chr4:145662551..145662554,+ | ||
|id=chr4:145662551..145662554,+ | |id=chr4:145662551..145662554,+ | ||
|ontology_enrichment_celltype=CL:0002139!7.69e-22!24;CL:0000222!8.15e-18!119;CL:0000071!3.07e-17!18;CL:0002546!3.07e-17!18;CL:0000359!6.78e-17!32;CL:0000115!1.65e-15!35;CL:0002078!9.93e-12!44;CL:0000213!7.39e-11!57;CL:0000215!7.39e-11!57;CL:0000192!2.63e-10!42;CL:0000514!2.63e-10!42;CL:1000413!4.26e-10!9;CL:0000680!1.12e-08!57;CL:0000056!1.12e-08!57;CL:0000355!1.12e-08!57;CL:0002539!9.73e-08!10;CL:0000187!1.18e-07!54;CL:0002544!3.69e-07!6;CL:0000393!4.39e-07!60;CL:0000211!4.39e-07!60;CL:0000183!7.94e-07!59 | |ontology_enrichment_celltype=CL:0002139!7.69e-22!24;CL:0000222!8.15e-18!119;CL:0000071!3.07e-17!18;CL:0002546!3.07e-17!18;CL:0000359!6.78e-17!32;CL:0000115!1.65e-15!35;CL:0002078!9.93e-12!44;CL:0000213!7.39e-11!57;CL:0000215!7.39e-11!57;CL:0000192!2.63e-10!42;CL:0000514!2.63e-10!42;CL:1000413!4.26e-10!9;CL:0000680!1.12e-08!57;CL:0000056!1.12e-08!57;CL:0000355!1.12e-08!57;CL:0002539!9.73e-08!10;CL:0000187!1.18e-07!54;CL:0002544!3.69e-07!6;CL:0000393!4.39e-07!60;CL:0000211!4.39e-07!60;CL:0000183!7.94e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002139;6.20e-35;24!CL:0000071;3.73e-27;18!CL:0000115;7.54e-24;36!CL:0000359;1.91e-16;32!CL:1000413;1.50e-15;9!CL:0002078;8.17e-14;45!CL:0002544;9.42e-11;6!CL:0000213;1.01e-10;58!CL:0000215;1.01e-10;58!CL:0002543;2.45e-09;6!CL:0002138;2.60e-09;6!CL:0000192;1.77e-08;43!CL:0002539;4.18e-08;10!CL:0002494;1.26e-07;16!CL:1000306;8.28e-07;4!CL:0002547;8.28e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.90e-35,24;CL:0000115,7.10e-28,36;CL:0000071,2.93e-27,18;CL:0002546,2.93e-27,18;CL:0000222,5.63e-25,121;CL:0002078,2.11e-20,45;CL:0000213,1.27e-17,58;CL:0000215,1.27e-17,58;CL:0000359,3.46e-17,32;CL:1000413,1.55e-15,9;CL:0000192,4.10e-11,43;CL:0000514,4.10e-11,43;CL:0002544,9.74e-11,6;CL:0002543,1.93e-09,6;CL:0005020,4.12e-09,6;CL:0002138,4.12e-09,6;CL:0005022,4.12e-09,6;CL:0000680,4.42e-09,58;CL:0000056,4.42e-09,58;CL:0000355,4.42e-09,58;CL:0000187,3.42e-08,55;CL:0002539,3.68e-08,10;CL:0002494,1.09e-07,16;CL:0000393,8.19e-07,61;CL:0000211,8.19e-07,61;CL:1000306,8.98e-07,4;CL:0002547,8.98e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002546;3.73e-27;18!CL:0005022;2.60e-09;6!CL:0000514;1.77e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!4.11e-43!194;UBERON:0002049!1.05e-37!79;UBERON:0007798!1.05e-37!79;UBERON:0000055!1.06e-37!69;UBERON:0004111!1.27e-36!241;UBERON:0001981!8.61e-36!60;UBERON:0007500!8.61e-36!60;UBERON:0004537!8.61e-36!60;UBERON:0006965!8.61e-36!60;UBERON:0000477!2.93e-33!286;UBERON:0004872!5.63e-32!84;UBERON:0000119!9.46e-31!312;UBERON:0004535!1.18e-30!110;UBERON:0000483!4.08e-30!309;UBERON:0001637!4.04e-29!42;UBERON:0003509!4.04e-29!42;UBERON:0004572!4.04e-29!42;UBERON:0001009!5.13e-29!113;UBERON:0003914!1.78e-24!118;UBERON:0004573!9.39e-24!33;UBERON:0004571!9.39e-24!33;UBERON:0001049!8.90e-20!57;UBERON:0005068!8.90e-20!57;UBERON:0006241!8.90e-20!57;UBERON:0007135!8.90e-20!57;UBERON:0002616!8.65e-18!59;UBERON:0001986!3.07e-17!18;UBERON:0004638!3.07e-17!18;UBERON:0004852!3.07e-17!18;UBERON:0003075!5.17e-17!86;UBERON:0007284!5.17e-17!86;UBERON:0002346!6.62e-17!90;UBERON:0001017!1.78e-16!82;UBERON:0000947!2.19e-16!21;UBERON:0010191!2.19e-16!21;UBERON:0005743!2.37e-16!86;UBERON:0000955!4.13e-16!69;UBERON:0006238!4.13e-16!69;UBERON:0000073!1.99e-15!94;UBERON:0001016!1.99e-15!94;UBERON:0000487!3.38e-14!22;UBERON:0002020!3.60e-14!34;UBERON:0003528!3.60e-14!34;UBERON:0001893!6.36e-14!34;UBERON:0007023!9.48e-14!115;UBERON:0002780!1.30e-13!41;UBERON:0001890!1.30e-13!41;UBERON:0006240!1.30e-13!41;UBERON:0002791!2.59e-13!33;UBERON:0003080!5.08e-13!42;UBERON:0006914!8.40e-13!25;UBERON:0000490!1.37e-12!138;UBERON:0001869!1.68e-12!32;UBERON:0000481!2.22e-11!347;UBERON:0003056!2.63e-10!61;UBERON:0003915!4.26e-10!9;UBERON:0004700!4.26e-10!9;UBERON:0001917!4.26e-10!9;UBERON:0002619!1.91e-09!22;UBERON:0000923!2.38e-09!604;UBERON:0005291!2.38e-09!604;UBERON:0006598!2.38e-09!604;UBERON:0002532!2.38e-09!604;UBERON:0000922!2.83e-09!612;UBERON:0002050!3.06e-09!605;UBERON:0005423!3.06e-09!605;UBERON:0000467!8.77e-09!625;UBERON:0000480!1.12e-08!626;UBERON:0002385!1.22e-08!63;UBERON:0001015!1.22e-08!63;UBERON:0000383!1.22e-08!63;UBERON:0001134!1.43e-08!61;UBERON:0002036!1.43e-08!61;UBERON:0003082!1.43e-08!61;UBERON:0004290!1.67e-08!70;UBERON:0000956!2.04e-08!25;UBERON:0000203!2.04e-08!25;UBERON:0000468!2.23e-08!659;UBERON:0003076!2.79e-08!15;UBERON:0003057!2.79e-08!15;UBERON:0001950!2.92e-08!20;UBERON:0002308!5.71e-08!9;UBERON:0000125!5.71e-08!9;UBERON:0002420!9.56e-08!9;UBERON:0007245!9.56e-08!9;UBERON:0010009!9.56e-08!9;UBERON:0010011!9.56e-08!9;UBERON:0000454!9.56e-08!9;UBERON:0004237!9.73e-08!10;UBERON:0004695!9.73e-08!10;UBERON:0002111!9.73e-08!10;UBERON:0004178!9.73e-08!10;UBERON:0000153!1.09e-07!129;UBERON:0007811!1.09e-07!129;UBERON:0000033!1.21e-07!123;UBERON:0004732!2.74e-07!13;UBERON:0000948!9.49e-07!24;UBERON:0005498!9.49e-07!24;UBERON:0004140!9.49e-07!24;UBERON:0009881!9.49e-07!24;UBERON:0004141!9.49e-07!24;UBERON:0003084!9.49e-07!24;UBERON:0007005!9.49e-07!24;UBERON:0004139!9.49e-07!24;UBERON:0004291!9.49e-07!24 | |ontology_enrichment_uberon=UBERON:0000025!4.11e-43!194;UBERON:0002049!1.05e-37!79;UBERON:0007798!1.05e-37!79;UBERON:0000055!1.06e-37!69;UBERON:0004111!1.27e-36!241;UBERON:0001981!8.61e-36!60;UBERON:0007500!8.61e-36!60;UBERON:0004537!8.61e-36!60;UBERON:0006965!8.61e-36!60;UBERON:0000477!2.93e-33!286;UBERON:0004872!5.63e-32!84;UBERON:0000119!9.46e-31!312;UBERON:0004535!1.18e-30!110;UBERON:0000483!4.08e-30!309;UBERON:0001637!4.04e-29!42;UBERON:0003509!4.04e-29!42;UBERON:0004572!4.04e-29!42;UBERON:0001009!5.13e-29!113;UBERON:0003914!1.78e-24!118;UBERON:0004573!9.39e-24!33;UBERON:0004571!9.39e-24!33;UBERON:0001049!8.90e-20!57;UBERON:0005068!8.90e-20!57;UBERON:0006241!8.90e-20!57;UBERON:0007135!8.90e-20!57;UBERON:0002616!8.65e-18!59;UBERON:0001986!3.07e-17!18;UBERON:0004638!3.07e-17!18;UBERON:0004852!3.07e-17!18;UBERON:0003075!5.17e-17!86;UBERON:0007284!5.17e-17!86;UBERON:0002346!6.62e-17!90;UBERON:0001017!1.78e-16!82;UBERON:0000947!2.19e-16!21;UBERON:0010191!2.19e-16!21;UBERON:0005743!2.37e-16!86;UBERON:0000955!4.13e-16!69;UBERON:0006238!4.13e-16!69;UBERON:0000073!1.99e-15!94;UBERON:0001016!1.99e-15!94;UBERON:0000487!3.38e-14!22;UBERON:0002020!3.60e-14!34;UBERON:0003528!3.60e-14!34;UBERON:0001893!6.36e-14!34;UBERON:0007023!9.48e-14!115;UBERON:0002780!1.30e-13!41;UBERON:0001890!1.30e-13!41;UBERON:0006240!1.30e-13!41;UBERON:0002791!2.59e-13!33;UBERON:0003080!5.08e-13!42;UBERON:0006914!8.40e-13!25;UBERON:0000490!1.37e-12!138;UBERON:0001869!1.68e-12!32;UBERON:0000481!2.22e-11!347;UBERON:0003056!2.63e-10!61;UBERON:0003915!4.26e-10!9;UBERON:0004700!4.26e-10!9;UBERON:0001917!4.26e-10!9;UBERON:0002619!1.91e-09!22;UBERON:0000923!2.38e-09!604;UBERON:0005291!2.38e-09!604;UBERON:0006598!2.38e-09!604;UBERON:0002532!2.38e-09!604;UBERON:0000922!2.83e-09!612;UBERON:0002050!3.06e-09!605;UBERON:0005423!3.06e-09!605;UBERON:0000467!8.77e-09!625;UBERON:0000480!1.12e-08!626;UBERON:0002385!1.22e-08!63;UBERON:0001015!1.22e-08!63;UBERON:0000383!1.22e-08!63;UBERON:0001134!1.43e-08!61;UBERON:0002036!1.43e-08!61;UBERON:0003082!1.43e-08!61;UBERON:0004290!1.67e-08!70;UBERON:0000956!2.04e-08!25;UBERON:0000203!2.04e-08!25;UBERON:0000468!2.23e-08!659;UBERON:0003076!2.79e-08!15;UBERON:0003057!2.79e-08!15;UBERON:0001950!2.92e-08!20;UBERON:0002308!5.71e-08!9;UBERON:0000125!5.71e-08!9;UBERON:0002420!9.56e-08!9;UBERON:0007245!9.56e-08!9;UBERON:0010009!9.56e-08!9;UBERON:0010011!9.56e-08!9;UBERON:0000454!9.56e-08!9;UBERON:0004237!9.73e-08!10;UBERON:0004695!9.73e-08!10;UBERON:0002111!9.73e-08!10;UBERON:0004178!9.73e-08!10;UBERON:0000153!1.09e-07!129;UBERON:0007811!1.09e-07!129;UBERON:0000033!1.21e-07!123;UBERON:0004732!2.74e-07!13;UBERON:0000948!9.49e-07!24;UBERON:0005498!9.49e-07!24;UBERON:0004140!9.49e-07!24;UBERON:0009881!9.49e-07!24;UBERON:0004141!9.49e-07!24;UBERON:0003084!9.49e-07!24;UBERON:0007005!9.49e-07!24;UBERON:0004139!9.49e-07!24;UBERON:0004291!9.49e-07!24 | ||
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| ||
|short_description=p@chr4:145662551..145662554,+ | |short_description=p@chr4:145662551..145662554,+ | ||
}} | }} |
Latest revision as of 02:01, 30 July 2015
Short description: | p@chr4:145662551..145662554, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:145662551..145662554, + |
Coexpression cluster: | C606_Endothelial_extraskeletal_Smooth_mesothelioma_Lymphatic_Fibroblast_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.90e-35 | 24 |
endothelial cell | 7.10e-28 | 36 |
blood vessel endothelial cell | 2.93e-27 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.93e-27 | 18 |
mesodermal cell | 5.63e-25 | 121 |
meso-epithelial cell | 2.11e-20 | 45 |
lining cell | 1.27e-17 | 58 |
barrier cell | 1.27e-17 | 58 |
vascular associated smooth muscle cell | 3.46e-17 | 32 |
endothelial cell of artery | 1.55e-15 | 9 |
smooth muscle cell | 4.10e-11 | 43 |
smooth muscle myoblast | 4.10e-11 | 43 |
aortic endothelial cell | 9.74e-11 | 6 |
vein endothelial cell | 1.93e-09 | 6 |
lymphangioblast | 4.12e-09 | 6 |
endothelial cell of lymphatic vessel | 4.12e-09 | 6 |
vascular lymphangioblast | 4.12e-09 | 6 |
muscle precursor cell | 4.42e-09 | 58 |
myoblast | 4.42e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.42e-09 | 58 |
muscle cell | 3.42e-08 | 55 |
aortic smooth muscle cell | 3.68e-08 | 10 |
cardiocyte | 1.09e-07 | 16 |
electrically responsive cell | 8.19e-07 | 61 |
electrically active cell | 8.19e-07 | 61 |
fibroblast of tunica adventitia of artery | 8.98e-07 | 4 |
fibroblast of the aortic adventitia | 8.98e-07 | 4 |