FFCP PHASE1:Hg19::chr19:15090488..15090564,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6511 | |EntrezGene=6511 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10944 | |HGNC=10944 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N753 | |UniProt=Q8N753 | ||
|association_with_transcript=0bp_to_uc002nab.2,uc002nac.2_5end | |association_with_transcript=0bp_to_uc002nab.2,uc002nac.2_5end | ||
|cluster_id=chr19:15090488..15090564,- | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_1_at_SLC1A6_5end | |description=CAGE_peak_1_at_SLC1A6_5end | ||
|id=chr19:15090488..15090564,- | |id=chr19:15090488..15090564,- | ||
|ontology_enrichment_celltype=CL:0000047!4.21e-13!8;CL:0000540!2.30e-10!6;CL:0000031!2.30e-10!6;CL:0000404!2.30e-10!6;CL:0002322!3.77e-09!5;CL:0000349!6.41e-07!3;CL:0002577!6.41e-07!3 | |ontology_enrichment_celltype=CL:0000047!4.21e-13!8;CL:0000540!2.30e-10!6;CL:0000031!2.30e-10!6;CL:0000404!2.30e-10!6;CL:0002322!3.77e-09!5;CL:0000349!6.41e-07!3;CL:0002577!6.41e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;7.05e-14;19!CL:0002322;4.61e-13;5!CL:0002577;1.01e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.39e-14,19;CL:0002322,3.12e-13,5;CL:0002577,8.21e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.04e-10;3!UBERON:0006601;1.77e-09;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;1.23e-45;22!UBERON:0001869;2.12e-44;32!UBERON:0003528;3.63e-42;34!UBERON:0002020;3.63e-42;34!UBERON:0002791;4.19e-41;32!UBERON:0001950;1.27e-40;20!UBERON:0000956;9.99e-40;25!UBERON:0000203;9.99e-40;25!UBERON:0001893;2.65e-39;34!UBERON:0002780;8.31e-30;41!UBERON:0001890;8.31e-30;41!UBERON:0000073;2.51e-29;53!UBERON:0002616;2.51e-29;53!UBERON:0000955;5.64e-24;68!UBERON:0001017;1.56e-21;75!UBERON:0001016;9.79e-19;83!UBERON:0004733;1.89e-14;12!UBERON:0002028;1.89e-14;12!UBERON:0001872;2.20e-14;5!UBERON:0000349;3.83e-14;5!UBERON:0005631;6.61e-14;10!UBERON:0000158;6.61e-14;10!UBERON:0004732;3.16e-13;13!UBERON:0000478;1.15e-12;24!UBERON:0001987;5.51e-12;4!UBERON:0000200;6.79e-12;6!UBERON:0002680;1.13e-11;9!UBERON:0001895;1.13e-11;9!UBERON:0002298;3.41e-11;6!UBERON:0002420;1.03e-10;9!UBERON:0000125;1.03e-10;9!UBERON:0007245;1.03e-10;9!UBERON:0002308;1.03e-10;9!UBERON:0010009;1.03e-10;9!UBERON:0010011;1.03e-10;9!UBERON:0000454;1.03e-10;9!UBERON:0000305;2.22e-10;7!UBERON:0001871;2.77e-10;6!UBERON:0002021;4.12e-10;5!UBERON:0007023;5.72e-09;114!UBERON:0000988;6.09e-09;3!UBERON:0001870;6.09e-09;3!UBERON:0011216;2.04e-07;132!UBERON:0000369;3.93e-07;4!UBERON:0002435;3.93e-07;4!UBERON:0000204;3.93e-07;4 | |||
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|short_description=p1@SLC1A6 | |short_description=p1@SLC1A6 | ||
}} | }} |
Latest revision as of 06:34, 16 September 2015
Short description: | p1@SLC1A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC1A6_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_uc002nab.2, uc002nac.2_5end |
EntrezGene: | SLC1A6 |
HGNC: | 10944 |
UniProt: | Q8N753 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.39e-14 | 19 |
embryonic stem cell | 3.12e-13 | 5 |
placental epithelial cell | 8.21e-10 | 3 |