FFCP PHASE1:Hg19::chr6:158402610..158402625,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8871 | |EntrezGene=8871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11504 | |HGNC=11504 | ||
|TSSclassifier=strong | |||
|UniProt=E7ER60,B4DG94,O15056 | |UniProt=E7ER60,B4DG94,O15056 | ||
|association_with_transcript=-262bp_to_ENST00000367121,ENST00000367122,NM_003898_5end | |association_with_transcript=-262bp_to_ENST00000367121,ENST00000367122,NM_003898_5end | ||
|cluster_id=chr6:158402610..158402625,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_SYNJ2_5end | |description=CAGE_peak_4_at_SYNJ2_5end | ||
|id=chr6:158402610..158402625,+ | |id=chr6:158402610..158402625,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000228;9.72e-14;1!CL:0002372;9.72e-14;1!CL:0002591;9.72e-14;1!CL:0000047;1.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,7.55e-14,1;CL:0002372,7.55e-14,1;CL:0002591,1.61e-13,1 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.78e-17;3!UBERON:0003057;1.78e-17;3!UBERON:0005425;3.07e-14;1!UBERON:0006222;9.72e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.75e-36!57;UBERON:0005068!2.75e-36!57;UBERON:0006241!2.75e-36!57;UBERON:0007135!2.75e-36!57;UBERON:0001017!3.75e-35!82;UBERON:0005743!8.35e-34!86;UBERON:0002616!3.66e-32!59;UBERON:0003075!6.17e-32!86;UBERON:0007284!6.17e-32!86;UBERON:0000073!7.25e-32!94;UBERON:0001016!7.25e-32!94;UBERON:0002346!1.14e-29!90;UBERON:0000955!5.01e-28!69;UBERON:0006238!5.01e-28!69;UBERON:0001893!1.06e-26!34;UBERON:0002020!1.41e-26!34;UBERON:0003528!1.41e-26!34;UBERON:0002791!1.83e-25!33;UBERON:0002780!2.18e-24!41;UBERON:0001890!2.18e-24!41;UBERON:0006240!2.18e-24!41;UBERON:0001869!2.99e-24!32;UBERON:0003080!1.50e-23!42;UBERON:0003056!2.64e-19!61;UBERON:0000033!2.52e-18!123;UBERON:0000153!2.44e-17!129;UBERON:0007811!2.44e-17!129;UBERON:0004121!5.77e-17!169;UBERON:0000956!1.49e-16!25;UBERON:0000203!1.49e-16!25;UBERON:0007023!3.94e-16!115;UBERON:0000924!4.19e-16!173;UBERON:0006601!4.19e-16!173;UBERON:0000025!1.53e-14!194;UBERON:0003076!4.09e-14!15;UBERON:0003057!4.09e-14!15;UBERON:0002619!1.33e-13!22;UBERON:0002308!3.87e-12!9;UBERON:0000125!3.87e-12!9;UBERON:0004732!8.72e-12!13;UBERON:0000477!9.23e-12!286;UBERON:0001950!1.75e-11!20;UBERON:0004733!1.70e-10!12;UBERON:0002028!1.70e-10!12;UBERON:0007277!1.70e-10!12;UBERON:0000119!2.80e-10!312;UBERON:0000483!3.49e-10!309;UBERON:0004111!4.44e-10!241;UBERON:0009663!1.20e-09!7;UBERON:0002420!4.16e-09!9;UBERON:0007245!4.16e-09!9;UBERON:0010009!4.16e-09!9;UBERON:0010011!4.16e-09!9;UBERON:0000454!4.16e-09!9;UBERON:0002298!9.66e-09!8;UBERON:0005174!7.59e-08!5;UBERON:0001137!7.59e-08!5;UBERON:0000475!1.22e-07!365;UBERON:0002680!4.27e-07!9;UBERON:0001895!4.27e-07!9;UBERON:0010092!4.27e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;1.29e-26;2!UBERON:0000122;1.29e-26;2!UBERON:0002298;3.62e-19;6!UBERON:0000988;1.78e-17;3!UBERON:0002240;1.78e-17;3!UBERON:0005174;1.78e-17;3!UBERON:0001137;1.78e-17;3!UBERON:0004732;1.17e-15;13!UBERON:0000941;3.07e-14;1!UBERON:0001785;3.07e-14;1!UBERON:0002464;3.07e-14;1!UBERON:0004904;3.07e-14;1!UBERON:0001021;3.07e-14;1!UBERON:0002336;3.50e-14;1!UBERON:0011215;3.50e-14;1!UBERON:0001018;3.50e-14;1!UBERON:0002473;3.50e-14;1!UBERON:0005340;3.50e-14;1!UBERON:0003544;3.50e-14;1!UBERON:0005970;3.50e-14;1!UBERON:0002316;3.50e-14;1!UBERON:0001020;3.50e-14;1!UBERON:0002437;3.50e-14;1!UBERON:0007190;9.72e-14;1!UBERON:0000073;4.21e-12;53!UBERON:0002616;4.21e-12;53!UBERON:0001016;5.43e-11;83!UBERON:0001017;4.77e-10;75!UBERON:0004733;6.88e-10;12!UBERON:0002028;6.88e-10;12!UBERON:0002780;1.64e-08;41!UBERON:0001890;1.64e-08;41!UBERON:0001894;5.09e-08;7!UBERON:0003714;9.24e-08;2!UBERON:0007023;1.30e-07;114!UBERON:0001897;1.64e-07;2!UBERON:0002148;1.64e-07;2!UBERON:0001875;1.64e-07;2!UBERON:0000078;1.64e-07;2!UBERON:0006331;1.64e-07;2!UBERON:0009662;1.64e-07;2!UBERON:0002012;1.64e-07;2!UBERON:0006514;1.64e-07;2!UBERON:0010225;1.64e-07;2!UBERON:0008886;1.64e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,1.29e-26,2;UBERON:0000122,1.29e-26,2;UBERON:0001049,6.86e-25,56;UBERON:0005068,6.86e-25,56;UBERON:0006241,6.86e-25,56;UBERON:0007135,6.86e-25,56;UBERON:0001016,7.57e-25,89;UBERON:0001017,1.08e-23,81;UBERON:0003075,1.27e-23,82;UBERON:0007284,1.27e-23,82;UBERON:0002346,1.81e-22,86;UBERON:0003076,1.76e-20,15;UBERON:0003057,1.76e-20,15;UBERON:0002298,5.60e-19,6;UBERON:0010371,2.36e-18,104;UBERON:0002240,1.51e-17,3;UBERON:0005174,1.51e-17,3;UBERON:0001137,1.51e-17,3;UBERON:0000073,1.51e-17,53;UBERON:0002616,1.51e-17,53;UBERON:0000988,3.20e-17,3;UBERON:0000955,1.59e-16,68;UBERON:0006238,1.59e-16,68;UBERON:0004732,1.53e-15,13;UBERON:0004121,2.34e-14,171;UBERON:0000924,2.34e-14,171;UBERON:0006601,2.34e-14,171;UBERON:0000941,3.08e-14,1;UBERON:0001785,3.08e-14,1;UBERON:0002464,3.08e-14,1;UBERON:0004904,3.08e-14,1;UBERON:0001021,3.08e-14,1;UBERON:0003902,3.08e-14,1;UBERON:0005425,3.08e-14,1;UBERON:0007023,3.34e-14,114;UBERON:0002336,3.50e-14,1;UBERON:0011215,3.50e-14,1;UBERON:0001018,3.50e-14,1;UBERON:0002473,3.50e-14,1;UBERON:0005340,3.50e-14,1;UBERON:0003544,3.50e-14,1;UBERON:0005970,3.50e-14,1;UBERON:0002316,3.50e-14,1;UBERON:0001020,3.50e-14,1;UBERON:0002437,3.50e-14,1;UBERON:0010314,3.73e-14,132;UBERON:0007190,1.83e-13,1;UBERON:0011216,1.40e-10,223;UBERON:0002780,2.32e-10,41;UBERON:0001890,2.32e-10,41;UBERON:0003080,2.32e-10,41;UBERON:0006240,2.32e-10,41;UBERON:0004733,8.52e-10,12;UBERON:0002028,8.52e-10,12;UBERON:0007277,8.52e-10,12;UBERON:0003056,2.61e-09,61;UBERON:0001894,3.98e-08,7;UBERON:0006222,3.98e-08,7;UBERON:0003714,9.25e-08,2;UBERON:0000025,1.06e-07,192;UBERON:0001897,1.36e-07,2;UBERON:0010225,1.36e-07,2;UBERON:0001875,1.54e-07,2;UBERON:0006514,1.54e-07,2;UBERON:0000078,2.12e-07,2;UBERON:0007497,2.12e-07,2;UBERON:0003643,2.12e-07,2;UBERON:0003504,2.12e-07,2;UBERON:0003469,2.12e-07,2;UBERON:0003496,2.12e-07,2;UBERON:0002012,2.12e-07,2;UBERON:0008886,2.12e-07,2;UBERON:0007303,2.12e-07,2;UBERON:0002061,2.12e-07,2;UBERON:0005432,2.12e-07,2;UBERON:0004363,2.12e-07,2;UBERON:0002148,2.40e-07,2;UBERON:0006331,2.40e-07,2;UBERON:0009662,2.40e-07,2 | |||
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| ||
|short_description=p4@SYNJ2 | |short_description=p4@SYNJ2 | ||
}} | }} |
Latest revision as of 11:08, 16 September 2015
Short description: | p4@SYNJ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SYNJ2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -262bp_to_ENST00000367121, ENST00000367122, NM_003898_5end |
EntrezGene: | SYNJ2 |
HGNC: | 11504 |
UniProt: | E7ER60B4DG94O15056 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 7.55e-14 | 1 |
myotube | 7.55e-14 | 1 |
smooth muscle cell of the pulmonary artery | 1.61e-13 | 1 |