FFCP PHASE1:Hg19::chr2:26205395..26205408,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:26205395..26205408,-
|short_description=p5@KIF3C
|description=CAGE_peak_5_at_KIF3C_5end
|association_with_transcript=-29bp_to_ENST00000264712,ENST000004177...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3797 | |EntrezGene=3797 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6321 | |HGNC=6321 | ||
|TSSclassifier=strong | |||
|UniProt=O14782,F8WER6,F8WAR6 | |UniProt=O14782,F8WER6,F8WAR6 | ||
|association_with_transcript=-29bp_to_ENST00000264712,ENST00000417737,ENST00000455394_5end | |||
|cluster_id=chr2:26205395..26205408,- | |||
|description=CAGE_peak_5_at_KIF3C_5end | |||
|id=chr2:26205395..26205408,- | |||
|ontology_enrichment_celltype=CL:0000220!2.35e-08!246;CL:0002321!3.33e-08!248;CL:0000066!6.76e-08!254;CL:0000221!5.77e-07!71;CL:1000449!8.61e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000507;5.36e-16;10!CL:1000494;5.36e-16;10!CL:1000449;4.61e-12;15!CL:1000497;2.37e-10;17!CL:0002518;2.37e-10;17!CL:0002681;1.95e-07;12!CL:0002584;1.95e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,5.43e-16,10;CL:1000494,5.43e-16,10;CL:1000449,5.87e-12,15;CL:1000497,2.92e-10,17;CL:0002518,2.92e-10,17;CL:0002681,2.42e-07,12;CL:0002584,2.42e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;4.82e-31;34!UBERON:0002020;4.82e-31;34!UBERON:0002791;7.18e-30;32!UBERON:0001869;1.45e-29;32!UBERON:0000956;3.24e-28;25!UBERON:0000203;3.24e-28;25!UBERON:0001893;5.84e-28;34!UBERON:0002619;1.64e-26;22!UBERON:0001950;5.29e-23;20!UBERON:0000073;1.18e-22;53!UBERON:0002616;1.18e-22;53!UBERON:0002780;1.21e-21;41!UBERON:0001890;1.21e-21;41!UBERON:0000955;1.54e-17;68!UBERON:0001017;5.04e-16;75!UBERON:0004211;5.36e-16;10!UBERON:0009773;5.36e-16;10!UBERON:0001231;5.36e-16;10!UBERON:0004810;5.36e-16;10!UBERON:0002298;4.49e-13;6!UBERON:0006555;4.61e-12;15!UBERON:0004819;4.61e-12;15!UBERON:0001285;4.61e-12;15!UBERON:0007684;4.61e-12;15!UBERON:0001016;6.23e-12;83!UBERON:0000200;4.77e-11;6!UBERON:0004733;1.52e-10;12!UBERON:0002028;1.52e-10;12!UBERON:0000125;1.08e-09;9!UBERON:0002308;1.08e-09;9!UBERON:0004732;1.36e-09;13!UBERON:0002113;5.56e-08;24!UBERON:0011143;5.56e-08;24!UBERON:0000988;1.23e-07;3!UBERON:0000369;1.52e-07;4!UBERON:0002435;1.52e-07;4!UBERON:0000204;1.52e-07;4!UBERON:0001225;1.95e-07;12!UBERON:0008987;1.95e-07;12!UBERON:0000353;2.95e-07;15!UBERON:0002021;3.03e-07;5!UBERON:0001896;4.21e-07;3!UBERON:0005290;4.21e-07;3!UBERON:0006554;5.47e-07;30!UBERON:0001008;5.47e-07;30 | |||
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| ||
|short_description=p5@KIF3C | |||
}} | }} |
Latest revision as of 14:25, 16 September 2015
Short description: | p5@KIF3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KIF3C_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000264712, ENST00000417737, ENST00000455394_5end |
EntrezGene: | KIF3C |
HGNC: | 6321 |
UniProt: | O14782F8WER6F8WAR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 5.43e-16 | 10 |
nephron tubule epithelial cell | 5.43e-16 | 10 |
epithelial cell of nephron | 5.87e-12 | 15 |
kidney cell | 2.92e-10 | 17 |
kidney epithelial cell | 2.92e-10 | 17 |
kidney cortical cell | 2.42e-07 | 12 |
renal cortical epithelial cell | 2.42e-07 | 12 |