FFCP PHASE1:Hg19::chr6:163835760..163835780,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:163835760..163835780,+ to FFCP PHASE1:Hg19::chr6:163835760..163835780,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9444 | |EntrezGene=9444 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21100 | |HGNC=21100 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PU8,Q8WY44 | |UniProt=Q96PU8,Q8WY44 | ||
|association_with_transcript=85bp_to_ENST00000275262,ENST00000361752,ENST00000392127,ENST00000453779,NM_006775,NM_206853,NM_206854,NM_206855,uc003que.2,uc003quf.2,uc003qug.2,uc003quh.2,uc003qui.2,uc003quj.2_5end | |||
|cluster_id=chr6:163835760..163835780,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_QKI_5end | |||
|id=chr6:163835760..163835780,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.00e-23!76;CL:0000557!7.14e-21!71;CL:0002009!5.06e-19!65;CL:0000839!5.34e-19!70;CL:0002194!7.96e-19!63;CL:0000576!7.96e-19!63;CL:0000040!7.96e-19!63;CL:0000559!7.96e-19!63;CL:0002057!1.46e-17!42;CL:0000763!5.61e-17!112;CL:0000049!5.61e-17!112;CL:0000860!2.37e-14!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.23e-14;33!CL:0002057;3.23e-14;33!CL:0000473;7.29e-14;39!CL:0000234;7.29e-14;39!CL:0000576;1.59e-12;48!CL:0000766;5.97e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.88e-27,72;CL:0000557,2.83e-24,67;CL:0002009,2.04e-22,61;CL:0002194,2.85e-22,59;CL:0000576,2.85e-22,59;CL:0000040,2.85e-22,59;CL:0000559,2.85e-22,59;CL:0000839,3.23e-22,66;CL:0000473,9.39e-20,48;CL:0000234,9.39e-20,48;CL:0000763,3.63e-19,108;CL:0000049,3.63e-19,108;CL:0000860,1.46e-17,42;CL:0002057,1.46e-17,42;CL:0000738,3.17e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;6.35e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.89e-28!115;UBERON:0001049!9.21e-25!57;UBERON:0005068!9.21e-25!57;UBERON:0006241!9.21e-25!57;UBERON:0007135!9.21e-25!57;UBERON:0001017!3.21e-24!82;UBERON:0002616!9.62e-23!59;UBERON:0000955!4.90e-22!69;UBERON:0006238!4.90e-22!69;UBERON:0005743!5.52e-22!86;UBERON:0003075!8.46e-20!86;UBERON:0007284!8.46e-20!86;UBERON:0002020!9.21e-19!34;UBERON:0003528!9.21e-19!34;UBERON:0001893!9.72e-19!34;UBERON:0002346!1.80e-18!90;UBERON:0002791!3.97e-18!33;UBERON:0003080!4.66e-18!42;UBERON:0000073!9.83e-18!94;UBERON:0001016!9.83e-18!94;UBERON:0002780!1.30e-17!41;UBERON:0001890!1.30e-17!41;UBERON:0006240!1.30e-17!41;UBERON:0001869!2.23e-17!32;UBERON:0002371!2.78e-17!80;UBERON:0001474!5.56e-17!86;UBERON:0004765!2.98e-16!101;UBERON:0001434!2.98e-16!101;UBERON:0002390!3.20e-15!102;UBERON:0003061!3.20e-15!102;UBERON:0002405!3.46e-15!115;UBERON:0002193!8.83e-15!112;UBERON:0000033!1.83e-14!123;UBERON:0000153!3.00e-14!129;UBERON:0007811!3.00e-14!129;UBERON:0000956!4.10e-13!25;UBERON:0000203!4.10e-13!25;UBERON:0003056!1.88e-12!61;UBERON:0002619!1.35e-11!22;UBERON:0004121!8.66e-11!169;UBERON:0001950!2.25e-10!20;UBERON:0000924!2.74e-10!173;UBERON:0006601!2.74e-10!173;UBERON:0000479!8.06e-10!787;UBERON:0002204!5.45e-09!167;UBERON:0000062!5.78e-09!511;UBERON:0000467!1.65e-08!625;UBERON:0000468!3.06e-08!659;UBERON:0000480!3.24e-08!626;UBERON:0003076!6.64e-08!15;UBERON:0003057!6.64e-08!15;UBERON:0002308!3.14e-07!9;UBERON:0000125!3.14e-07!9;UBERON:0002420!3.90e-07!9;UBERON:0007245!3.90e-07!9;UBERON:0010009!3.90e-07!9;UBERON:0010011!3.90e-07!9;UBERON:0000454!3.90e-07!9;UBERON:0000922!8.65e-07!612;UBERON:0004732!9.68e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.51e-16;34!UBERON:0003528;3.83e-16;34!UBERON:0002020;3.83e-16;34!UBERON:0002791;8.11e-16;32!UBERON:0001869;9.62e-16;32!UBERON:0000073;2.21e-13;53!UBERON:0002616;2.21e-13;53!UBERON:0000956;3.58e-13;25!UBERON:0000203;3.58e-13;25!UBERON:0002780;7.66e-13;41!UBERON:0001890;7.66e-13;41!UBERON:0002619;1.18e-11;22!UBERON:0001017;1.42e-11;75!UBERON:0001950;1.99e-10;20!UBERON:0000955;2.48e-10;68!UBERON:0001016;1.69e-08;83!UBERON:0007023;9.44e-08;114!UBERON:0000125;3.03e-07;9!UBERON:0002308;3.03e-07;9!UBERON:0002420;3.77e-07;9!UBERON:0007245;3.77e-07;9!UBERON:0010009;3.77e-07;9!UBERON:0010011;3.77e-07;9!UBERON:0000454;3.77e-07;9!UBERON:0004732;6.99e-07;13 | |||
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| ||
|short_description=p4@QKI | |||
}} | }} |
Latest revision as of 18:25, 16 September 2015
Short description: | p4@QKI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_QKI_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 85bp_to_ENST00000275262, ENST00000361752, ENST00000392127, ENST00000453779, NM_006775, NM_206853, NM_206854, NM_206855, uc003que.2, uc003quf.2, uc003qug.2, uc003quh.2, uc003qui.2, uc003quj.2_5end |
EntrezGene: | QKI |
HGNC: | 21100 |
UniProt: | Q96PU8Q8WY44 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.88e-27 | 72 |
granulocyte monocyte progenitor cell | 2.83e-24 | 67 |
macrophage dendritic cell progenitor | 2.04e-22 | 61 |
monopoietic cell | 2.85e-22 | 59 |
monocyte | 2.85e-22 | 59 |
monoblast | 2.85e-22 | 59 |
promonocyte | 2.85e-22 | 59 |
myeloid lineage restricted progenitor cell | 3.23e-22 | 66 |
defensive cell | 9.39e-20 | 48 |
phagocyte | 9.39e-20 | 48 |
myeloid cell | 3.63e-19 | 108 |
common myeloid progenitor | 3.63e-19 | 108 |
classical monocyte | 1.46e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.46e-17 | 42 |
leukocyte | 3.17e-07 | 136 |