FFCP PHASE1:Hg19::chr1:150230431..150230501,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23632 | |EntrezGene=23632 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1372 | |HGNC=1372 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000483993_5end | |association_with_transcript=0bp_to_ENST00000483993_5end | ||
|cluster_id=chr1:150230431..150230501,+ | |||
|coexpression_cluster_id=C1249 | |||
|description=CAGE_peak_1_at_CA14_5end | |description=CAGE_peak_1_at_CA14_5end | ||
|id=chr1:150230431..150230501,+ | |id=chr1:150230431..150230501,+ | ||
|ontology_enrichment_celltype=CL:0000147!4.36e-16!14;CL:0000148!4.81e-15!10;CL:0000541!4.81e-15!10;CL:0002322!4.97e-08!5;CL:0000710!6.20e-07!20 | |ontology_enrichment_celltype=CL:0000147!4.36e-16!14;CL:0000148!4.81e-15!10;CL:0000541!4.81e-15!10;CL:0002322!4.97e-08!5;CL:0000710!6.20e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0000147;1.05e-25;14!CL:0000148;1.27e-23;10!CL:0002322;4.05e-12;5!CL:0000710;1.63e-10;20!CL:0000075;1.22e-08;27!CL:0002567;2.14e-08;3!CL:0000149;2.31e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,1.03e-25,14;CL:0000148,1.19e-23,10;CL:0000541,1.19e-23,10;CL:0002322,3.71e-12,5;CL:0000710,1.58e-10,20;CL:0000075,1.17e-08,27;CL:0002567,2.14e-08,3;CL:0000149,2.41e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.24e-10;82!UBERON:0006241;2.96e-07;3!UBERON:0003057;2.96e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.35e-41!115;UBERON:0005743!1.39e-40!86;UBERON:0000073!1.35e-39!94;UBERON:0001016!1.35e-39!94;UBERON:0001017!1.08e-36!82;UBERON:0001049!3.58e-34!57;UBERON:0005068!3.58e-34!57;UBERON:0006241!3.58e-34!57;UBERON:0007135!3.58e-34!57;UBERON:0002346!2.88e-31!90;UBERON:0003075!5.35e-31!86;UBERON:0007284!5.35e-31!86;UBERON:0002616!1.89e-28!59;UBERON:0000955!1.24e-27!69;UBERON:0006238!1.24e-27!69;UBERON:0002780!1.22e-25!41;UBERON:0001890!1.22e-25!41;UBERON:0006240!1.22e-25!41;UBERON:0003080!9.03e-25!42;UBERON:0001893!1.49e-24!34;UBERON:0000924!1.94e-24!173;UBERON:0006601!1.94e-24!173;UBERON:0002020!2.09e-24!34;UBERON:0003528!2.09e-24!34;UBERON:0004121!7.09e-24!169;UBERON:0002791!1.44e-23!33;UBERON:0001869!2.48e-22!32;UBERON:0003056!4.00e-21!61;UBERON:0000153!1.52e-18!129;UBERON:0007811!1.52e-18!129;UBERON:0000033!1.59e-18!123;UBERON:0000956!5.84e-16!25;UBERON:0000203!5.84e-16!25;UBERON:0001950!8.69e-16!20;UBERON:0002619!1.28e-15!22;UBERON:0003076!1.99e-10!15;UBERON:0003057!1.99e-10!15;UBERON:0002308!2.92e-10!9;UBERON:0000125!2.92e-10!9;UBERON:0004732!1.92e-08!13;UBERON:0009663!2.99e-08!7;UBERON:0002298!5.89e-08!8;UBERON:0002420!8.60e-08!9;UBERON:0007245!8.60e-08!9;UBERON:0010009!8.60e-08!9;UBERON:0010011!8.60e-08!9;UBERON:0000454!8.60e-08!9;UBERON:0004733!2.66e-07!12;UBERON:0002028!2.66e-07!12;UBERON:0007277!2.66e-07!12;UBERON:0000025!5.02e-07!194;UBERON:0000922!8.50e-07!612;UBERON:0003135!9.48e-07!11;UBERON:0000200!9.63e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.52e-12;6!UBERON:0001017;8.22e-11;75!UBERON:0000073;1.34e-10;53!UBERON:0002616;1.34e-10;53!UBERON:0000125;2.35e-10;9!UBERON:0002308;2.35e-10;9!UBERON:0001893;7.36e-10;34!UBERON:0002780;8.35e-10;41!UBERON:0001890;8.35e-10;41!UBERON:0001016;1.11e-09;83!UBERON:0004732;1.80e-09;13!UBERON:0003528;6.32e-09;34!UBERON:0002020;6.32e-09;34!UBERON:0000955;7.91e-09;68!UBERON:0007023;2.37e-08;114!UBERON:0001869;4.12e-08;32!UBERON:0002791;6.45e-08;32!UBERON:0004733;8.30e-08;12!UBERON:0002028;8.30e-08;12!UBERON:0001896;2.41e-07;3!UBERON:0005290;2.41e-07;3!UBERON:0002240;2.96e-07;3!UBERON:0005174;2.96e-07;3!UBERON:0001137;2.96e-07;3!UBERON:0009663;3.31e-07;7!UBERON:0000988;7.44e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.19e-26,81;UBERON:0001016,1.52e-25,89;UBERON:0007023,2.80e-24,114;UBERON:0001049,2.08e-22,56;UBERON:0005068,2.08e-22,56;UBERON:0006241,2.08e-22,56;UBERON:0007135,2.08e-22,56;UBERON:0003075,3.00e-22,82;UBERON:0007284,3.00e-22,82;UBERON:0002346,9.17e-21,86;UBERON:0000073,1.77e-18,53;UBERON:0002616,1.77e-18,53;UBERON:0000955,4.74e-18,68;UBERON:0006238,4.74e-18,68;UBERON:0010371,1.02e-16,104;UBERON:0010314,6.89e-16,132;UBERON:0004121,1.29e-15,171;UBERON:0000924,1.29e-15,171;UBERON:0006601,1.29e-15,171;UBERON:0003056,9.66e-14,61;UBERON:0003076,1.83e-12,15;UBERON:0003057,1.83e-12,15;UBERON:0002298,1.88e-12,6;UBERON:0002780,1.93e-12,41;UBERON:0001890,1.93e-12,41;UBERON:0003080,1.93e-12,41;UBERON:0006240,1.93e-12,41;UBERON:0001893,9.01e-11,34;UBERON:0003528,1.19e-10,34;UBERON:0002020,1.19e-10,34;UBERON:0000125,3.01e-10,9;UBERON:0002308,3.01e-10,9;UBERON:0011216,1.50e-09,223;UBERON:0004732,1.85e-09,13;UBERON:0000966,1.25e-08,6;UBERON:0005388,1.25e-08,6;UBERON:0001802,1.25e-08,6;UBERON:0002791,1.37e-08,32;UBERON:0001869,1.61e-08,32;UBERON:0001781,2.89e-08,4;UBERON:0004733,8.55e-08,12;UBERON:0002028,8.55e-08,12;UBERON:0007277,8.55e-08,12;UBERON:0001896,2.36e-07,3;UBERON:0005290,2.36e-07,3;UBERON:0010096,2.36e-07,3;UBERON:0002240,2.46e-07,3;UBERON:0005174,2.46e-07,3;UBERON:0001137,2.46e-07,3;UBERON:0009663,3.58e-07,7;UBERON:0000988,9.35e-07,3 | |||
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|short_description=p1@CA14 | |short_description=p1@CA14 | ||
}} | }} |
Latest revision as of 21:48, 16 September 2015
Short description: | p1@CA14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CA14_5end |
Coexpression cluster: | C1249_Melanocyte_anaplastic_Wilms_retina_heart_optic_teratocarcinoma |
Association with transcript: | 0bp_to_ENST00000483993_5end |
EntrezGene: | CA14 |
HGNC: | 1372 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 1.03e-25 | 14 |
melanocyte | 1.19e-23 | 10 |
melanoblast | 1.19e-23 | 10 |
embryonic stem cell | 3.71e-12 | 5 |
neurecto-epithelial cell | 1.58e-10 | 20 |
columnar/cuboidal epithelial cell | 1.17e-08 | 27 |
light melanocyte | 2.14e-08 | 3 |
visual pigment cell | 2.41e-08 | 4 |