FFCP PHASE1:Hg19::chr17:67138020..67138062,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23460 | |EntrezGene=23460 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=36 | |HGNC=36 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N139 | |UniProt=Q8N139 | ||
|association_with_transcript=-5bp_to_ENST00000284425,NM_080284,uc002jhw.1,uc002jhy.2_5end | |association_with_transcript=-5bp_to_ENST00000284425,NM_080284,uc002jhw.1,uc002jhy.2_5end | ||
|cluster_id=chr17:67138020..67138062,- | |||
|coexpression_cluster_id=C2432 | |coexpression_cluster_id=C2432 | ||
|description=CAGE_peak_1_at_ABCA6_5end | |description=CAGE_peak_1_at_ABCA6_5end | ||
|id=chr17:67138020..67138062,- | |id=chr17:67138020..67138062,- | ||
|ontology_enrichment_celltype=CL:0000057!2.68e-11!75;CL:0000680!1.04e-10!57;CL:0000056!1.04e-10!57;CL:0000355!1.04e-10!57;CL:0000187!2.49e-10!54;CL:0000055!3.16e-10!180;CL:0000222!3.14e-09!119;CL:0000183!1.68e-08!59;CL:0000192!3.30e-08!42;CL:0000514!3.30e-08!42;CL:0000393!9.63e-08!60;CL:0000211!9.63e-08!60;CL:0002494!4.54e-07!16;CL:0000359!7.80e-07!32 | |ontology_enrichment_celltype=CL:0000057!2.68e-11!75;CL:0000680!1.04e-10!57;CL:0000056!1.04e-10!57;CL:0000355!1.04e-10!57;CL:0000187!2.49e-10!54;CL:0000055!3.16e-10!180;CL:0000222!3.14e-09!119;CL:0000183!1.68e-08!59;CL:0000192!3.30e-08!42;CL:0000514!3.30e-08!42;CL:0000393!9.63e-08!60;CL:0000211!9.63e-08!60;CL:0002494!4.54e-07!16;CL:0000359!7.80e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0002494;1.78e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.06e-09,76;CL:0000680,8.65e-08,58;CL:0000056,8.65e-08,58;CL:0000355,8.65e-08,58;CL:0000187,9.18e-08,55;CL:0002494,1.50e-07,16;CL:0000136,8.39e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;5.18e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.00e-07,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0007100;2.95e-13;25!UBERON:0000948;7.94e-12;22!UBERON:0004573;1.66e-09;33!UBERON:0004571;1.66e-09;33!UBERON:0007023;1.62e-08;114!UBERON:0001637;3.90e-08;42!UBERON:0003509;3.90e-08;42!UBERON:0004572;3.90e-08;42!UBERON:0000947;2.06e-07;21!UBERON:0010191;2.06e-07;21 | |||
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| ||
|short_description=p1@ABCA6 | |short_description=p1@ABCA6 | ||
}} | }} |
Latest revision as of 01:03, 17 September 2015
Short description: | p1@ABCA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ABCA6_5end |
Coexpression cluster: | C2432_Cardiac_Hepatocyte_Fibroblast_lung_heart_adipose_liver |
Association with transcript: | -5bp_to_ENST00000284425, NM_080284, uc002jhw.1, uc002jhy.2_5end |
EntrezGene: | ABCA6 |
HGNC: | 36 |
UniProt: | Q8N139 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.06e-09 | 76 |
muscle precursor cell | 8.65e-08 | 58 |
myoblast | 8.65e-08 | 58 |
multi-potent skeletal muscle stem cell | 8.65e-08 | 58 |
muscle cell | 9.18e-08 | 55 |
cardiocyte | 1.50e-07 | 16 |
fat cell | 8.39e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.00e-07 | 14 |