FFCP PHASE1:Hg19::chr19:291365..291427,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8612 | |EntrezGene=8612 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9230 | |HGNC=9230 | ||
|TSSclassifier=strong | |||
|UniProt=O43688,E9PAY8 | |UniProt=O43688,E9PAY8 | ||
|association_with_transcript=7bp_to_ENST00000269812,ENST00000434325,NM_003712,NM_177526,uc002loi.2,uc002loj.2_5end | |association_with_transcript=7bp_to_ENST00000269812,ENST00000434325,NM_003712,NM_177526,uc002loi.2,uc002loj.2_5end | ||
|cluster_id=chr19:291365..291427,- | |||
|description=CAGE_peak_1_at_PPAP2C_5end | |description=CAGE_peak_1_at_PPAP2C_5end | ||
|id=chr19:291365..291427,- | |id=chr19:291365..291427,- | ||
|ontology_enrichment_celltype=CL:0000066!1.02e-36!254;CL:0002076!1.22e-08!43;CL:0000082!3.02e-08!19;CL:0000076!5.09e-07!62 | |ontology_enrichment_celltype=CL:0000066!1.02e-36!254;CL:0002076!1.22e-08!43;CL:0000082!3.02e-08!19;CL:0000076!5.09e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0000082;1.62e-08;19!CL:0002076;5.81e-07;42!CL:1000497;6.08e-07;17!CL:0002518;6.08e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.05e-37,253;CL:0002076,2.07e-09,42;CL:0000082,1.81e-08,19;CL:1000497,6.04e-07,17;CL:0002518,6.04e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.27e-14;29 | |||
|ontology_enrichment_disease=DOID:305!3.30e-23!106;DOID:0050687!1.07e-18!143;DOID:299!1.03e-10!25;DOID:0050615!1.83e-08!16;DOID:1324!6.56e-08!15;DOID:14566!2.15e-07!239;DOID:120!4.74e-07!27;DOID:162!5.86e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:299;2.31e-11;25!DOID:0050615;9.74e-09;16!DOID:1324;3.79e-08;15!DOID:305;1.36e-07;106!DOID:120;1.39e-07;27!DOID:193;3.17e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.17e-25,106;DOID:0050687,2.81e-19,143;DOID:299,2.16e-11,25;DOID:14566,6.36e-09,239;DOID:0050615,1.11e-08,16;DOID:162,2.21e-08,235;DOID:1324,4.25e-08,15;DOID:120,1.35e-07,27;DOID:193,3.00e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0000064!2.94e-22!219;UBERON:0000481!2.67e-21!347;UBERON:0000464!1.51e-17!104;UBERON:0000922!2.62e-17!612;UBERON:0004119!7.60e-17!169;UBERON:0000925!7.60e-17!169;UBERON:0006595!7.60e-17!169;UBERON:0000468!3.12e-16!659;UBERON:0000477!4.30e-16!286;UBERON:0000475!1.49e-15!365;UBERON:0002050!2.20e-15!605;UBERON:0005423!2.20e-15!605;UBERON:0000923!3.08e-15!604;UBERON:0005291!3.08e-15!604;UBERON:0006598!3.08e-15!604;UBERON:0002532!3.08e-15!604;UBERON:0008947!2.38e-14!38;UBERON:0003258!2.38e-14!38;UBERON:0001007!3.17e-14!155;UBERON:0001555!3.17e-14!155;UBERON:0007026!3.17e-14!155;UBERON:0000063!6.67e-14!97;UBERON:0001004!8.54e-14!72;UBERON:0004111!1.05e-13!241;UBERON:0000062!2.48e-13!511;UBERON:0000466!5.85e-13!126;UBERON:0000480!8.69e-13!626;UBERON:0000467!9.50e-13!625;UBERON:0000033!4.02e-12!123;UBERON:0004121!9.06e-12!169;UBERON:0000483!1.80e-11!309;UBERON:0000077!1.82e-11!130;UBERON:0000119!1.92e-11!312;UBERON:0000072!2.23e-11!46;UBERON:0000153!2.65e-11!129;UBERON:0007811!2.65e-11!129;UBERON:0000065!3.78e-11!53;UBERON:0000924!4.14e-11!173;UBERON:0006601!4.14e-11!173;UBERON:0004921!6.37e-11!129;UBERON:0004185!6.37e-11!129;UBERON:0001048!7.09e-11!168;UBERON:0001041!4.60e-10!98;UBERON:0005177!4.64e-10!107;UBERON:0003104!1.11e-09!238;UBERON:0009142!1.11e-09!238;UBERON:0002553!1.19e-09!70;UBERON:0000025!3.72e-09!194;UBERON:0005178!3.95e-09!34;UBERON:0002224!3.95e-09!34;UBERON:0003075!9.35e-09!86;UBERON:0007284!9.35e-09!86;UBERON:0005181!2.17e-08!35;UBERON:0000058!2.61e-08!26;UBERON:0003886!2.62e-08!63;UBERON:0004802!3.02e-08!19;UBERON:0000115!3.02e-08!19;UBERON:0002048!4.77e-08!22;UBERON:0000117!4.77e-08!22;UBERON:0000171!4.77e-08!22;UBERON:0000170!4.77e-08!22;UBERON:0005597!4.77e-08!22;UBERON:0000118!4.77e-08!22;UBERON:0002346!6.01e-08!90;UBERON:0007023!3.27e-07!115;UBERON:0003056!4.61e-07!61;UBERON:0005743!5.10e-07!86;UBERON:0005153!5.21e-07!37;UBERON:0001049!5.61e-07!57;UBERON:0005068!5.61e-07!57;UBERON:0006241!5.61e-07!57;UBERON:0007135!5.61e-07!57;UBERON:0000073!8.63e-07!94;UBERON:0001016!8.63e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;2.32e-12;37!UBERON:0000065;2.22e-10;44!UBERON:0005178;5.41e-09;34!UBERON:0002224;5.41e-09;34!UBERON:0004807;1.46e-08;22!UBERON:0004802;1.62e-08;19!UBERON:0000115;1.62e-08;19!UBERON:0002048;2.44e-08;22!UBERON:0000117;2.44e-08;22!UBERON:0000171;2.44e-08;22!UBERON:0000170;2.44e-08;22!UBERON:0005181;3.15e-08;35!UBERON:0001004;3.82e-08;65!UBERON:0005911;3.86e-07;36 | |||
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| ||
|short_description=p1@PPAP2C | |short_description=p1@PPAP2C | ||
}} | }} |
Latest revision as of 03:14, 17 September 2015
Short description: | p1@PPAP2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PPAP2C_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENST00000269812, ENST00000434325, NM_003712, NM_177526, uc002loi.2, uc002loj.2_5end |
EntrezGene: | PPAP2C |
HGNC: | 9230 |
UniProt: | O43688E9PAY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.05e-37 | 253 |
endo-epithelial cell | 2.07e-09 | 42 |
epithelial cell of lung | 1.81e-08 | 19 |
kidney cell | 6.04e-07 | 17 |
kidney epithelial cell | 6.04e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.17e-25 | 106 |
cell type cancer | 2.81e-19 | 143 |
adenocarcinoma | 2.16e-11 | 25 |
disease of cellular proliferation | 6.36e-09 | 239 |
respiratory system cancer | 1.11e-08 | 16 |
cancer | 2.21e-08 | 235 |
lung cancer | 4.25e-08 | 15 |
female reproductive organ cancer | 1.35e-07 | 27 |
reproductive organ cancer | 3.00e-07 | 29 |