FFCP PHASE1:Hg19::chr16:66400553..66400565,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1003 | |EntrezGene=1003 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1764 | |HGNC=1764 | ||
|TSSclassifier=strong | |||
|UniProt=P33151 | |UniProt=P33151 | ||
|association_with_transcript=20bp_to_ENST00000341529_5end | |association_with_transcript=20bp_to_ENST00000341529_5end | ||
|cluster_id=chr16:66400553..66400565,+ | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_3_at_CDH5_5end | |description=CAGE_peak_3_at_CDH5_5end | ||
|id=chr16:66400553..66400565,+ | |id=chr16:66400553..66400565,+ | ||
|ontology_enrichment_celltype=CL:0002139!3.00e-25!24;CL:0000115!1.40e-22!35;CL:0000071!3.19e-19!18;CL:0002546!3.19e-19!18;CL:0002078!2.68e-15!44;CL:1000413!1.49e-10!9;CL:0000213!3.52e-09!57;CL:0000215!3.52e-09!57;CL:0005020!1.42e-07!6;CL:0002138!1.42e-07!6;CL:0005022!1.42e-07!6;CL:0002544!1.45e-07!6;CL:0002543!2.49e-07!6;CL:0000222!7.20e-07!119 | |ontology_enrichment_celltype=CL:0002139!3.00e-25!24;CL:0000115!1.40e-22!35;CL:0000071!3.19e-19!18;CL:0002546!3.19e-19!18;CL:0002078!2.68e-15!44;CL:1000413!1.49e-10!9;CL:0000213!3.52e-09!57;CL:0000215!3.52e-09!57;CL:0005020!1.42e-07!6;CL:0002138!1.42e-07!6;CL:0005022!1.42e-07!6;CL:0002544!1.45e-07!6;CL:0002543!2.49e-07!6;CL:0000222!7.20e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.95e-33;24!CL:0000115;5.11e-27;36!CL:0000071;5.95e-25;18!CL:0002078;5.72e-15;45!CL:1000413;1.84e-13;9!CL:0000213;3.28e-10;58!CL:0000215;3.28e-10;58!CL:0002138;1.59e-09;6!CL:0002544;1.63e-09;6!CL:0002543;3.37e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.16e-33,24;CL:0000115,7.94e-32,36;CL:0000071,6.09e-25,18;CL:0002546,6.09e-25,18;CL:0002078,4.69e-23,45;CL:0000213,2.30e-15,58;CL:0000215,2.30e-15,58;CL:1000413,1.85e-13,9;CL:0005020,1.60e-09,6;CL:0002138,1.60e-09,6;CL:0005022,1.60e-09,6;CL:0002544,1.65e-09,6;CL:0002543,3.36e-09,6;CL:0000222,4.32e-09,121 | |||
|ontology_enrichment_development_v019=CL:0002546;5.95e-25;18!CL:0005022;1.59e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.72e-47!115;UBERON:0000025!1.21e-42!194;UBERON:0004111!4.40e-41!241;UBERON:0000477!1.36e-39!286;UBERON:0004872!1.99e-29!84;UBERON:0001009!3.67e-29!113;UBERON:0000055!1.34e-27!69;UBERON:0002049!1.37e-27!79;UBERON:0007798!1.37e-27!79;UBERON:0000119!1.70e-27!312;UBERON:0004535!4.70e-27!110;UBERON:0000483!2.18e-26!309;UBERON:0001981!2.19e-24!60;UBERON:0007500!2.19e-24!60;UBERON:0004537!2.19e-24!60;UBERON:0006965!2.19e-24!60;UBERON:0001049!2.75e-23!57;UBERON:0005068!2.75e-23!57;UBERON:0006241!2.75e-23!57;UBERON:0007135!2.75e-23!57;UBERON:0003914!2.80e-23!118;UBERON:0002616!3.76e-21!59;UBERON:0003075!1.30e-19!86;UBERON:0007284!1.30e-19!86;UBERON:0001986!3.19e-19!18;UBERON:0004638!3.19e-19!18;UBERON:0004852!3.19e-19!18;UBERON:0000955!9.29e-19!69;UBERON:0006238!9.29e-19!69;UBERON:0001017!3.72e-18!82;UBERON:0002346!7.64e-18!90;UBERON:0005743!2.28e-17!86;UBERON:0003080!1.92e-16!42;UBERON:0002780!1.11e-15!41;UBERON:0001890!1.11e-15!41;UBERON:0006240!1.11e-15!41;UBERON:0000467!1.23e-15!625;UBERON:0000073!1.64e-15!94;UBERON:0001016!1.64e-15!94;UBERON:0000480!1.67e-15!626;UBERON:0000468!8.17e-15!659;UBERON:0000487!3.05e-14!22;UBERON:0001637!3.18e-14!42;UBERON:0003509!3.18e-14!42;UBERON:0004572!3.18e-14!42;UBERON:0002020!4.29e-14!34;UBERON:0003528!4.29e-14!34;UBERON:0001893!5.92e-14!34;UBERON:0002791!1.55e-13!33;UBERON:0001869!5.86e-13!32;UBERON:0007100!1.09e-12!27;UBERON:0004573!1.28e-12!33;UBERON:0004571!1.28e-12!33;UBERON:0000153!4.67e-12!129;UBERON:0007811!4.67e-12!129;UBERON:0000922!7.56e-12!612;UBERON:0003056!7.57e-12!61;UBERON:0000481!8.78e-12!347;UBERON:0006914!1.31e-11!25;UBERON:0002050!1.34e-11!605;UBERON:0005423!1.34e-11!605;UBERON:0000923!3.38e-11!604;UBERON:0005291!3.38e-11!604;UBERON:0006598!3.38e-11!604;UBERON:0002532!3.38e-11!604;UBERON:0000033!4.28e-11!123;UBERON:0002619!1.25e-10!22;UBERON:0003915!1.49e-10!9;UBERON:0004700!1.49e-10!9;UBERON:0001917!1.49e-10!9;UBERON:0000948!1.71e-10!24;UBERON:0005498!1.71e-10!24;UBERON:0004140!1.71e-10!24;UBERON:0009881!1.71e-10!24;UBERON:0004141!1.71e-10!24;UBERON:0003084!1.71e-10!24;UBERON:0007005!1.71e-10!24;UBERON:0004139!1.71e-10!24;UBERON:0004291!1.71e-10!24;UBERON:0000947!2.10e-10!21;UBERON:0010191!2.10e-10!21;UBERON:0003103!3.97e-10!69;UBERON:0001950!1.18e-09!20;UBERON:0000956!1.73e-09!25;UBERON:0000203!1.73e-09!25;UBERON:0000490!2.07e-08!138;UBERON:0003076!4.10e-08!15;UBERON:0003057!4.10e-08!15;UBERON:0004121!1.06e-07!169;UBERON:0004732!3.28e-07!13;UBERON:0000924!4.12e-07!173;UBERON:0006601!4.12e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.95e-25;18!UBERON:0001986;5.95e-25;18!UBERON:0004852;5.95e-25;18!UBERON:0000487;3.91e-19;22!UBERON:0006914;5.07e-16;25!UBERON:0000055;3.93e-14;65!UBERON:0003915;1.84e-13;9!UBERON:0004700;1.84e-13;9!UBERON:0001917;1.84e-13;9!UBERON:0007500;3.61e-13;56!UBERON:0001981;3.61e-13;56!UBERON:0004537;3.61e-13;56!UBERON:0004573;9.97e-12;33!UBERON:0004571;9.97e-12;33!UBERON:0001637;1.06e-11;42!UBERON:0003509;1.06e-11;42!UBERON:0004572;1.06e-11;42!UBERON:0000490;5.71e-11;33!UBERON:0000947;2.33e-10;21!UBERON:0010191;2.33e-10;21!UBERON:0007100;3.14e-10;25!UBERON:0007023;5.04e-10;114!UBERON:0001893;3.95e-09;34!UBERON:0002049;4.42e-09;75!UBERON:0007798;4.42e-09;75!UBERON:0003914;2.16e-08;74!UBERON:0002791;2.40e-08;32!UBERON:0001869;4.78e-08;32!UBERON:0002465;5.25e-08;10!UBERON:0001009;5.40e-08;112!UBERON:0003528;6.53e-08;34!UBERON:0002020;6.53e-08;34!UBERON:0000948;1.07e-07;22!UBERON:0001638;1.47e-07;9!UBERON:0003920;1.47e-07;9!UBERON:0004582;1.47e-07;9!UBERON:0002780;1.49e-07;41!UBERON:0001890;1.49e-07;41!UBERON:0004535;1.79e-07;109!UBERON:0002619;2.60e-07;22!UBERON:0001473;8.71e-07;8!UBERON:0004536;8.71e-07;8!UBERON:0006558;8.71e-07;8 | |||
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| ||
|short_description=p3@CDH5 | |short_description=p3@CDH5 | ||
}} | }} |
Latest revision as of 08:09, 17 September 2015
Short description: | p3@CDH5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDH5_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 20bp_to_ENST00000341529_5end |
EntrezGene: | CDH5 |
HGNC: | 1764 |
UniProt: | P33151 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.16e-33 | 24 |
endothelial cell | 7.94e-32 | 36 |
blood vessel endothelial cell | 6.09e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.09e-25 | 18 |
meso-epithelial cell | 4.69e-23 | 45 |
lining cell | 2.30e-15 | 58 |
barrier cell | 2.30e-15 | 58 |
endothelial cell of artery | 1.85e-13 | 9 |
lymphangioblast | 1.60e-09 | 6 |
endothelial cell of lymphatic vessel | 1.60e-09 | 6 |
vascular lymphangioblast | 1.60e-09 | 6 |
aortic endothelial cell | 1.65e-09 | 6 |
vein endothelial cell | 3.36e-09 | 6 |
mesodermal cell | 4.32e-09 | 121 |