FFCP PHASE1:Hg19::chr1:31712727..31712756,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79570 | |EntrezGene=79570 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25743 | |HGNC=25743 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z5F5,Q4KMZ8 | |UniProt=B7Z5F5,Q4KMZ8 | ||
|association_with_transcript=0bp_to_NM_024522_5end | |association_with_transcript=0bp_to_NM_024522_5end | ||
|cluster_id=chr1:31712727..31712756,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_NKAIN1_5end | |description=CAGE_peak_1_at_NKAIN1_5end | ||
|id=chr1:31712727..31712756,- | |id=chr1:31712727..31712756,- | ||
|ontology_enrichment_celltype=CL:0002319!2.92e-09!25;CL:0000133!2.93e-08!59;CL:0000047!5.48e-08!8 | |ontology_enrichment_celltype=CL:0002319!2.92e-09!25;CL:0000133!2.93e-08!59;CL:0000047!5.48e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000540;2.53e-12;6!CL:0000404;2.53e-12;6!CL:0002322;4.68e-09;5!CL:0002321;5.89e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.61e-15,8;CL:0000540,2.73e-12,6;CL:0000031,2.73e-12,6;CL:0000404,2.73e-12,6;CL:0002322,4.29e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.57e-14;82!CL:0000031;2.53e-12;6!UBERON:0006215;3.74e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.70e-40!82;UBERON:0000073!5.49e-40!94;UBERON:0001016!5.49e-40!94;UBERON:0005743!1.12e-39!86;UBERON:0001049!1.26e-32!57;UBERON:0005068!1.26e-32!57;UBERON:0006241!1.26e-32!57;UBERON:0007135!1.26e-32!57;UBERON:0000955!5.29e-31!69;UBERON:0006238!5.29e-31!69;UBERON:0003075!2.64e-26!86;UBERON:0007284!2.64e-26!86;UBERON:0002616!7.67e-26!59;UBERON:0002346!1.08e-24!90;UBERON:0001893!1.87e-24!34;UBERON:0002020!2.10e-24!34;UBERON:0003528!2.10e-24!34;UBERON:0004121!4.36e-24!169;UBERON:0002780!7.36e-24!41;UBERON:0001890!7.36e-24!41;UBERON:0006240!7.36e-24!41;UBERON:0002791!1.19e-23!33;UBERON:0000924!3.20e-23!173;UBERON:0006601!3.20e-23!173;UBERON:0000033!6.48e-23!123;UBERON:0003080!6.80e-23!42;UBERON:0001869!9.44e-23!32;UBERON:0000153!1.47e-22!129;UBERON:0007811!1.47e-22!129;UBERON:0007023!3.38e-21!115;UBERON:0003056!1.09e-20!61;UBERON:0002619!1.28e-17!22;UBERON:0000956!2.40e-17!25;UBERON:0000203!2.40e-17!25;UBERON:0001950!4.76e-16!20;UBERON:0000475!2.49e-12!365;UBERON:0003076!7.64e-11!15;UBERON:0003057!7.64e-11!15;UBERON:0004732!2.50e-09!13;UBERON:0004733!1.36e-08!12;UBERON:0002028!1.36e-08!12;UBERON:0007277!1.36e-08!12;UBERON:0002308!1.44e-08!9;UBERON:0000125!1.44e-08!9;UBERON:0000064!2.67e-08!219;UBERON:0002420!3.26e-08!9;UBERON:0007245!3.26e-08!9;UBERON:0010009!3.26e-08!9;UBERON:0010011!3.26e-08!9;UBERON:0000454!3.26e-08!9;UBERON:0000468!1.37e-07!659;UBERON:0009663!5.86e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.75e-37;34!UBERON:0003528;1.28e-36;34!UBERON:0002020;1.28e-36;34!UBERON:0001869;5.80e-36;32!UBERON:0002791;6.04e-36;32!UBERON:0002619;9.95e-34;22!UBERON:0001950;2.38e-30;20!UBERON:0002780;6.60e-30;41!UBERON:0001890;6.60e-30;41!UBERON:0000073;1.06e-29;53!UBERON:0002616;1.06e-29;53!UBERON:0000956;4.79e-29;25!UBERON:0000203;4.79e-29;25!UBERON:0001017;1.87e-23;75!UBERON:0001016;9.46e-23;83!UBERON:0000955;4.80e-21;68!UBERON:0000125;1.33e-16;9!UBERON:0002308;1.33e-16;9!UBERON:0004732;5.63e-14;13!UBERON:0009663;3.60e-13;7!UBERON:0002420;6.24e-13;9!UBERON:0007245;6.24e-13;9!UBERON:0010009;6.24e-13;9!UBERON:0010011;6.24e-13;9!UBERON:0000454;6.24e-13;9!UBERON:0004733;1.82e-12;12!UBERON:0002028;1.82e-12;12!UBERON:0002298;7.06e-12;6!UBERON:0000200;2.80e-11;6!UBERON:0002021;1.13e-10;5!UBERON:0001872;2.68e-10;5!UBERON:0007023;3.59e-10;114!UBERON:0011216;4.05e-09;132!UBERON:0002680;5.03e-08;9!UBERON:0001895;5.03e-08;9!UBERON:0000369;1.10e-07;4!UBERON:0002435;1.10e-07;4!UBERON:0000204;1.10e-07;4!UBERON:0001871;3.80e-07;6!UBERON:0000988;4.75e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.13e-70,89;UBERON:0001017,1.54e-66,81;UBERON:0001049,2.62e-57,56;UBERON:0005068,2.62e-57,56;UBERON:0006241,2.62e-57,56;UBERON:0007135,2.62e-57,56;UBERON:0000073,2.08e-52,53;UBERON:0002616,2.08e-52,53;UBERON:0000955,1.96e-48,68;UBERON:0006238,1.96e-48,68;UBERON:0001893,4.75e-44,34;UBERON:0003528,5.95e-44,34;UBERON:0002020,5.95e-44,34;UBERON:0003075,3.64e-42,82;UBERON:0007284,3.64e-42,82;UBERON:0002780,8.19e-41,41;UBERON:0001890,8.19e-41,41;UBERON:0003080,8.19e-41,41;UBERON:0006240,8.19e-41,41;UBERON:0002791,1.69e-40,32;UBERON:0001869,1.83e-40,32;UBERON:0002346,1.60e-39,86;UBERON:0004121,3.77e-36,171;UBERON:0000924,3.77e-36,171;UBERON:0006601,3.77e-36,171;UBERON:0007023,4.50e-34,114;UBERON:0002619,8.63e-34,22;UBERON:0010371,3.77e-33,104;UBERON:0003056,2.55e-31,61;UBERON:0001950,2.00e-30,20;UBERON:0000956,4.23e-29,25;UBERON:0000203,4.23e-29,25;UBERON:0011216,2.11e-28,223;UBERON:0010314,2.67e-25,132;UBERON:0003076,4.72e-17,15;UBERON:0003057,4.72e-17,15;UBERON:0000125,1.52e-16,9;UBERON:0002308,1.52e-16,9;UBERON:0004732,6.23e-14,13;UBERON:0009663,4.07e-13,7;UBERON:0002420,6.89e-13,9;UBERON:0007245,6.89e-13,9;UBERON:0010009,6.89e-13,9;UBERON:0010011,6.89e-13,9;UBERON:0000454,6.89e-13,9;UBERON:0004733,1.97e-12,12;UBERON:0002028,1.97e-12,12;UBERON:0007277,1.97e-12,12;UBERON:0000025,3.82e-12,192;UBERON:0002298,7.85e-12,6;UBERON:0000200,2.56e-11,6;UBERON:0002021,1.18e-10,5;UBERON:0001872,2.28e-10,5;UBERON:0004111,3.10e-10,240;UBERON:0002680,5.10e-08,9;UBERON:0001895,5.10e-08,9;UBERON:0010092,5.10e-08,9;UBERON:0000483,7.80e-08,306;UBERON:0000922,8.34e-08,592;UBERON:0000369,1.23e-07,4;UBERON:0002435,1.23e-07,4;UBERON:0000204,1.23e-07,4;UBERON:0010082,1.23e-07,4;UBERON:0000119,1.28e-07,309;UBERON:0001871,3.91e-07,6;UBERON:0000988,4.84e-07,3 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.492484232307152,0,0.940364164434263,0.85870796139317,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0.795285947051099,0,0.283604451492204,0.221729397462564,0.175669571386252,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0.245668634623536,0,1.18800285728205,0.247266929278557,0,0,0,0.250237039743928,0,0,0,0.300476117813194,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,3.78118489001746,5.16866096453793,2.67246068599892,6.94529068602982,8.07426722802011,4.37972830890996,0,0,0,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0.8231480226628,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0.325808305310325,0,0,1.15930404975077,0,0,0,0.190254152234598,6.3216351836742,9.4433477830436,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0.571481048629521,0.381988425558278,0,0,0.205654985406647,0,0.571652865261156,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,1.01637849688985,28.6307678486768,39.4377294516625,25.2949560654867,26.7934275694329,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0.280660094433074,0.256278298511402,0,0.321707842287215,0,0.308419387605311,1.9531789784444,0.410635780069046,0.519254429183621,1.39452454151951,0.241718899183244,0,0,0,0.364182336013434,0.393373244878272,0,0.308061348417659,0,0,0.316654886678627,0,0.170093705276516,0.647747748306418,0,0,0,0,0,0.223874754722178,0.219259876645935,0,0.256450125116389,0,0,0.206082023295445,0.0915694648183434,0.247528499761764,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0.145016693914229,0.511359764496605,0.356128142586949,0,0,0,0.10115778085555,0,0,0,9.85707456563484,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0,0.707027159768564,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,14.4371978289504,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0.485442086998054,0,0,0,0,0,0.994147647766298,7.17414023693615,0,0.16480387422676,4.43363357068786,0,0.276283915531148,0,2.86352311006033,0.123084805461069,0.311039587661807,0.0898683511473268,0,0,0,0,0,2.90799823828566,6.40099877316774,43.9150355602627,24.2197817809267,0.349839999984783,0,0.1137934482855,0,0,3.44743373241465,0.291604613383254,0.868124974666461,4.42870692906919,6.75340056302285,9.15490417902499,25.7649675639753,21.574976183609,1.97446857438575,0,0,0.153900517007594,0.227884111694002,0,0.269272933229316,0,0.957003479195758,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0.123563938946503,0,20.0181364952611,3.21031058919516,0.937057782901357,0,0,0.485560759068186,1.57833761139756,0,25.7101119769612,0.063186579628488,2.1045278718029,0.311064574191741,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0,4.71762004253481,0,0,0,0.0821154570532092,0.0969890164884194,0.0882561266915003,0.90392296312213,0.137041924646751,0,11.2693216801464,0.195551382734803,0,0,0.19980960958213,0.144090417154106,0.687219576995494,0.343189995723929,0,0,0,0.135904206073614,0.732219924186332,0.203996435272644,0.288950589901519,18.6130289500035,25.4644004739107,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0.196854963029498,0,7.15706720828373,11.4410861133724,8.03765742325096,7.28959013965339,7.06248574649615,0,0,6.92544945901481,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0.082092520749339,0.170388021785422,0,0,0,8.27410920713923,12.1653993603275,0.171086837884329,0.704815022316672,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0.314108192500469,1.77213635993397,4.14889300666675,12.268711209237,3.44045517414043,11.6475504113695,9.06607482944198,0.276697269872462,0.124980407962107,0,0.570930667089935,0,0.936669811613763,4.49255188693558,0.597019211547496,0,0,0,0,0,0,0,0,0.295710299979268,0,0,0.621051827505038,0,0,0,0,0,0,4.9099137984691,0.107410557042488,0,0.398095888698616,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0.303859956177382,12.4432592536558,0.194860308839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| ||
|short_description=p1@NKAIN1 | |short_description=p1@NKAIN1 | ||
}} | }} |
Latest revision as of 12:55, 17 September 2015
Short description: | p1@NKAIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NKAIN1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_NM_024522_5end |
EntrezGene: | NKAIN1 |
HGNC: | 25743 |
UniProt: | B7Z5F5Q4KMZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.61e-15 | 8 |
neuron | 2.73e-12 | 6 |
neuroblast | 2.73e-12 | 6 |
electrically signaling cell | 2.73e-12 | 6 |
embryonic stem cell | 4.29e-09 | 5 |