FFCP PHASE1:Hg19::chr5:31193785..31193810,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1004 | |EntrezGene=1004 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1765 | |HGNC=1765 | ||
|TSSclassifier=strong | |||
|UniProt=P55285 | |UniProt=P55285 | ||
|association_with_transcript=0bp_to_uc003jhc.1,uc003jhd.1,uc003jhe.1_5end | |association_with_transcript=0bp_to_uc003jhc.1,uc003jhd.1,uc003jhe.1_5end | ||
|cluster_id=chr5:31193785..31193810,+ | |||
|coexpression_cluster_id=C1958 | |||
|description=CAGE_peak_2_at_CDH6_5end | |description=CAGE_peak_2_at_CDH6_5end | ||
|id=chr5:31193785..31193810,+ | |id=chr5:31193785..31193810,+ | ||
|ontology_enrichment_celltype=CL:0000359!1.09e-17!32;CL:0000192!4.12e-16!42;CL:0000514!4.12e-16!42;CL:0000183!5.77e-15!59;CL:0000187!5.10e-14!54;CL:0000680!2.69e-13!57;CL:0000056!2.69e-13!57;CL:0000355!2.69e-13!57;CL:0000393!2.52e-12!60;CL:0000211!2.52e-12!60;CL:0000055!3.67e-12!180;CL:0002494!3.00e-07!16 | |ontology_enrichment_celltype=CL:0000359!1.09e-17!32;CL:0000192!4.12e-16!42;CL:0000514!4.12e-16!42;CL:0000183!5.77e-15!59;CL:0000187!5.10e-14!54;CL:0000680!2.69e-13!57;CL:0000056!2.69e-13!57;CL:0000355!2.69e-13!57;CL:0000393!2.52e-12!60;CL:0000211!2.52e-12!60;CL:0000055!3.67e-12!180;CL:0002494!3.00e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.82e-19;32!CL:0000192;1.43e-10;43!CL:0002494;3.56e-08;16!CL:0002539;1.48e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.33e-19,32;CL:0000192,7.86e-14,43;CL:0000514,7.86e-14,43;CL:0000187,1.46e-10,55;CL:0000680,8.34e-10,58;CL:0000056,8.34e-10,58;CL:0000355,8.34e-10,58;CL:0000393,3.18e-09,61;CL:0000211,3.18e-09,61;CL:0002494,4.03e-08,16;CL:0002539,1.77e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.43e-10;43!UBERON:0005795;4.50e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;5.93e-13;33!UBERON:0004571;5.93e-13;33!UBERON:0001869;6.89e-11;32!UBERON:0003528;9.41e-11;34!UBERON:0002020;9.41e-11;34!UBERON:0002791;1.06e-10;32!UBERON:0001637;1.10e-10;42!UBERON:0003509;1.10e-10;42!UBERON:0004572;1.10e-10;42!UBERON:0001893;1.17e-10;34!UBERON:0002780;9.48e-10;41!UBERON:0001890;9.48e-10;41!UBERON:0000956;1.69e-09;25!UBERON:0000203;1.69e-09;25!UBERON:0000073;3.16e-09;53!UBERON:0002616;3.16e-09;53!UBERON:0002619;1.24e-08;22!UBERON:0000948;1.40e-08;22!UBERON:0001017;1.92e-08;75!UBERON:0000955;2.23e-08;68!UBERON:0001950;3.35e-08;20!UBERON:0007100;5.32e-08;25!UBERON:0004237;1.48e-07;10!UBERON:0004695;1.48e-07;10!UBERON:0002111;1.48e-07;10!UBERON:0004178;1.48e-07;10!UBERON:0001016;5.22e-07;83!UBERON:0000947;8.57e-07;21!UBERON:0010191;8.57e-07;21 | |||
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| ||
|short_description=p2@CDH6 | |short_description=p2@CDH6 | ||
}} | }} |
Latest revision as of 14:39, 17 September 2015
Short description: | p2@CDH6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDH6_5end |
Coexpression cluster: | C1958_mesodermal_Lens_Smooth_Ciliary_Fibroblast_teratocarcinoma_leiomyoma |
Association with transcript: | 0bp_to_uc003jhc.1, uc003jhd.1, uc003jhe.1_5end |
EntrezGene: | CDH6 |
HGNC: | 1765 |
UniProt: | P55285 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.33e-19 | 32 |
smooth muscle cell | 7.86e-14 | 43 |
smooth muscle myoblast | 7.86e-14 | 43 |
muscle cell | 1.46e-10 | 55 |
muscle precursor cell | 8.34e-10 | 58 |
myoblast | 8.34e-10 | 58 |
multi-potent skeletal muscle stem cell | 8.34e-10 | 58 |
electrically responsive cell | 3.18e-09 | 61 |
electrically active cell | 3.18e-09 | 61 |
cardiocyte | 4.03e-08 | 16 |
aortic smooth muscle cell | 1.77e-07 | 10 |