FFCP PHASE1:Hg19::chr20:9495263..9495313,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=24141 | |EntrezGene=24141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16097 | |HGNC=16097 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJQ1 | |UniProt=Q9UJQ1 | ||
|association_with_transcript=0bp_to_ENST00000427562,uc002wni.1,uc010zrc.1_5end | |association_with_transcript=0bp_to_ENST00000427562,uc002wni.1,uc010zrc.1_5end | ||
|cluster_id=chr20:9495263..9495313,+ | |||
|coexpression_cluster_id=C2627 | |coexpression_cluster_id=C2627 | ||
|description=CAGE_peak_3_at_LAMP5_5end | |description=CAGE_peak_3_at_LAMP5_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000784;2.38e-10;3 | |ontology_enrichment_celltype_v019=CL:0000784;2.38e-10;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.38e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.58e-13;82!UBERON:0010122;4.72e-07;2 | |ontology_enrichment_development_v019=UBERON:0006601;1.58e-13;82!UBERON:0010122;4.72e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.23e-46!57;UBERON:0005068!1.23e-46!57;UBERON:0006241!1.23e-46!57;UBERON:0007135!1.23e-46!57;UBERON:0001017!1.06e-40!82;UBERON:0005743!1.60e-39!86;UBERON:0007023!8.90e-39!115;UBERON:0002616!1.48e-38!59;UBERON:0000073!4.71e-37!94;UBERON:0001016!4.71e-37!94;UBERON:0000955!3.91e-36!69;UBERON:0006238!3.91e-36!69;UBERON:0002780!6.16e-32!41;UBERON:0001890!6.16e-32!41;UBERON:0006240!6.16e-32!41;UBERON:0003075!1.20e-31!86;UBERON:0007284!1.20e-31!86;UBERON:0003080!7.01e-31!42;UBERON:0001869!1.18e-29!32;UBERON:0001893!1.95e-29!34;UBERON:0002020!2.11e-29!34;UBERON:0003528!2.11e-29!34;UBERON:0002346!2.17e-29!90;UBERON:0002791!3.07e-28!33;UBERON:0002619!3.05e-25!22;UBERON:0000153!8.66e-25!129;UBERON:0007811!8.66e-25!129;UBERON:0000033!2.49e-23!123;UBERON:0001950!7.26e-23!20;UBERON:0000956!2.27e-21!25;UBERON:0000203!2.27e-21!25;UBERON:0003056!5.92e-20!61;UBERON:0004121!1.42e-19!169;UBERON:0000924!1.29e-18!173;UBERON:0006601!1.29e-18!173;UBERON:0003076!7.63e-17!15;UBERON:0003057!7.63e-17!15;UBERON:0004733!4.06e-14!12;UBERON:0002028!4.06e-14!12;UBERON:0007277!4.06e-14!12;UBERON:0004732!9.62e-13!13;UBERON:0002680!8.42e-11!9;UBERON:0001895!8.42e-11!9;UBERON:0010092!8.42e-11!9;UBERON:0002420!8.25e-10!9;UBERON:0007245!8.25e-10!9;UBERON:0010009!8.25e-10!9;UBERON:0010011!8.25e-10!9;UBERON:0000454!8.25e-10!9;UBERON:0002308!1.85e-09!9;UBERON:0000125!1.85e-09!9;UBERON:0000200!7.47e-09!6;UBERON:0001871!2.89e-08!7;UBERON:0000349!9.12e-08!5;UBERON:0002037!2.22e-07!6;UBERON:0006215!2.22e-07!6;UBERON:0009663!2.37e-07!7;UBERON:0001872!3.30e-07!5;UBERON:0002021!4.38e-07!5;UBERON:0004111!5.40e-07!241;UBERON:0000369!9.36e-07!4;UBERON:0002435!9.36e-07!4;UBERON:0000204!9.36e-07!4;UBERON:0010082!9.36e-07!4 | |ontology_enrichment_uberon=UBERON:0001049!1.23e-46!57;UBERON:0005068!1.23e-46!57;UBERON:0006241!1.23e-46!57;UBERON:0007135!1.23e-46!57;UBERON:0001017!1.06e-40!82;UBERON:0005743!1.60e-39!86;UBERON:0007023!8.90e-39!115;UBERON:0002616!1.48e-38!59;UBERON:0000073!4.71e-37!94;UBERON:0001016!4.71e-37!94;UBERON:0000955!3.91e-36!69;UBERON:0006238!3.91e-36!69;UBERON:0002780!6.16e-32!41;UBERON:0001890!6.16e-32!41;UBERON:0006240!6.16e-32!41;UBERON:0003075!1.20e-31!86;UBERON:0007284!1.20e-31!86;UBERON:0003080!7.01e-31!42;UBERON:0001869!1.18e-29!32;UBERON:0001893!1.95e-29!34;UBERON:0002020!2.11e-29!34;UBERON:0003528!2.11e-29!34;UBERON:0002346!2.17e-29!90;UBERON:0002791!3.07e-28!33;UBERON:0002619!3.05e-25!22;UBERON:0000153!8.66e-25!129;UBERON:0007811!8.66e-25!129;UBERON:0000033!2.49e-23!123;UBERON:0001950!7.26e-23!20;UBERON:0000956!2.27e-21!25;UBERON:0000203!2.27e-21!25;UBERON:0003056!5.92e-20!61;UBERON:0004121!1.42e-19!169;UBERON:0000924!1.29e-18!173;UBERON:0006601!1.29e-18!173;UBERON:0003076!7.63e-17!15;UBERON:0003057!7.63e-17!15;UBERON:0004733!4.06e-14!12;UBERON:0002028!4.06e-14!12;UBERON:0007277!4.06e-14!12;UBERON:0004732!9.62e-13!13;UBERON:0002680!8.42e-11!9;UBERON:0001895!8.42e-11!9;UBERON:0010092!8.42e-11!9;UBERON:0002420!8.25e-10!9;UBERON:0007245!8.25e-10!9;UBERON:0010009!8.25e-10!9;UBERON:0010011!8.25e-10!9;UBERON:0000454!8.25e-10!9;UBERON:0002308!1.85e-09!9;UBERON:0000125!1.85e-09!9;UBERON:0000200!7.47e-09!6;UBERON:0001871!2.89e-08!7;UBERON:0000349!9.12e-08!5;UBERON:0002037!2.22e-07!6;UBERON:0006215!2.22e-07!6;UBERON:0009663!2.37e-07!7;UBERON:0001872!3.30e-07!5;UBERON:0002021!4.38e-07!5;UBERON:0004111!5.40e-07!241;UBERON:0000369!9.36e-07!4;UBERON:0002435!9.36e-07!4;UBERON:0000204!9.36e-07!4;UBERON:0010082!9.36e-07!4 | ||
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|short_description=p3@LAMP5 | |short_description=p3@LAMP5 | ||
}} | }} |
Latest revision as of 17:34, 17 September 2015
Short description: | p3@LAMP5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LAMP5_5end |
Coexpression cluster: | C2627_biphenotypic_acute_putamen_caudate_Dendritic_hippocampus_amygdala |
Association with transcript: | 0bp_to_ENST00000427562, uc002wni.1, uc010zrc.1_5end |
EntrezGene: | LAMP5 |
HGNC: | 16097 |
UniProt: | Q9UJQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.38e-10 | 3 |