FFCP PHASE1:Hg19::chr21:17442864..17442881,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388815 | |EntrezGene=388815 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=1274 | |HGNC=1274 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=22bp_to_ENST00000458468,NR_027790,uc002ykb.2_5end | |association_with_transcript=22bp_to_ENST00000458468,NR_027790,uc002ykb.2_5end | ||
|cluster_id=chr21:17442864..17442881,+ | |||
|coexpression_cluster_id=C1328 | |||
|description=CAGE_peak_11_at_LINC00478_5end | |description=CAGE_peak_11_at_LINC00478_5end | ||
|id=chr21:17442864..17442881,+ | |id=chr21:17442864..17442881,+ | ||
|ontology_enrichment_celltype=CL:0000128!2.03e-07!7;CL:0000126!2.03e-07!7;CL:0000127!2.03e-07!7;CL:0002453!2.03e-07!7;CL:0002319!5.64e-07!25 | |ontology_enrichment_celltype=CL:0000128!2.03e-07!7;CL:0000126!2.03e-07!7;CL:0000127!2.03e-07!7;CL:0002453!2.03e-07!7;CL:0002319!5.64e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000128;3.06e-11;7!CL:0000126;3.06e-11;7!CL:0000127;3.06e-11;7!CL:0002605;1.96e-10;3!CL:0002319;6.79e-10;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.22e-11,7;CL:0000126,2.22e-11,7;CL:0000127,2.22e-11,7;CL:0002453,2.22e-11,7;CL:0002605,2.04e-10,3;CL:0002319,6.16e-10,25;CL:0000047,8.42e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.89e-11;3!UBERON:0006601;5.61e-11;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.23e-60!57;UBERON:0005068!8.23e-60!57;UBERON:0006241!8.23e-60!57;UBERON:0007135!8.23e-60!57;UBERON:0000073!2.13e-59!94;UBERON:0001016!2.13e-59!94;UBERON:0001017!3.36e-59!82;UBERON:0005743!1.17e-57!86;UBERON:0002616!4.53e-52!59;UBERON:0000955!9.96e-51!69;UBERON:0006238!9.96e-51!69;UBERON:0002346!4.72e-45!90;UBERON:0003075!8.84e-45!86;UBERON:0007284!8.84e-45!86;UBERON:0003080!2.64e-41!42;UBERON:0002780!2.80e-40!41;UBERON:0001890!2.80e-40!41;UBERON:0006240!2.80e-40!41;UBERON:0002020!2.54e-34!34;UBERON:0003528!2.54e-34!34;UBERON:0001893!2.90e-34!34;UBERON:0002791!4.15e-33!33;UBERON:0001869!5.30e-32!32;UBERON:0007023!1.69e-31!115;UBERON:0000924!2.97e-31!173;UBERON:0006601!2.97e-31!173;UBERON:0003056!9.20e-31!61;UBERON:0004121!1.60e-30!169;UBERON:0000153!7.33e-30!129;UBERON:0007811!7.33e-30!129;UBERON:0000033!8.55e-29!123;UBERON:0000956!1.09e-24!25;UBERON:0000203!1.09e-24!25;UBERON:0002619!7.54e-21!22;UBERON:0003076!4.20e-19!15;UBERON:0003057!4.20e-19!15;UBERON:0001950!5.66e-19!20;UBERON:0004732!3.83e-17!13;UBERON:0000475!1.25e-16!365;UBERON:0004733!5.86e-16!12;UBERON:0002028!5.86e-16!12;UBERON:0007277!5.86e-16!12;UBERON:0002680!7.01e-13!9;UBERON:0001895!7.01e-13!9;UBERON:0010092!7.01e-13!9;UBERON:0000468!2.34e-11!659;UBERON:0000467!2.50e-11!625;UBERON:0000480!3.01e-11!626;UBERON:0002308!4.93e-11!9;UBERON:0000125!4.93e-11!9;UBERON:0002298!2.55e-10!8;UBERON:0000483!9.17e-10!309;UBERON:0000119!1.84e-09!312;UBERON:0002037!3.18e-09!6;UBERON:0006215!3.18e-09!6;UBERON:0000025!4.73e-09!194;UBERON:0000922!4.93e-09!612;UBERON:0000200!1.11e-08!6;UBERON:0009663!1.29e-08!7;UBERON:0002050!1.41e-08!605;UBERON:0005423!1.41e-08!605;UBERON:0000062!2.36e-08!511;UBERON:0002420!3.10e-08!9;UBERON:0007245!3.10e-08!9;UBERON:0010009!3.10e-08!9;UBERON:0010011!3.10e-08!9;UBERON:0000454!3.10e-08!9;UBERON:0000923!3.10e-08!604;UBERON:0005291!3.10e-08!604;UBERON:0006598!3.10e-08!604;UBERON:0002532!3.10e-08!604;UBERON:0000064!3.44e-08!219;UBERON:0001872!9.59e-08!5;UBERON:0001894!2.41e-07!7;UBERON:0006222!2.41e-07!7;UBERON:0004111!2.47e-07!241 | |ontology_enrichment_uberon=UBERON:0001049!8.23e-60!57;UBERON:0005068!8.23e-60!57;UBERON:0006241!8.23e-60!57;UBERON:0007135!8.23e-60!57;UBERON:0000073!2.13e-59!94;UBERON:0001016!2.13e-59!94;UBERON:0001017!3.36e-59!82;UBERON:0005743!1.17e-57!86;UBERON:0002616!4.53e-52!59;UBERON:0000955!9.96e-51!69;UBERON:0006238!9.96e-51!69;UBERON:0002346!4.72e-45!90;UBERON:0003075!8.84e-45!86;UBERON:0007284!8.84e-45!86;UBERON:0003080!2.64e-41!42;UBERON:0002780!2.80e-40!41;UBERON:0001890!2.80e-40!41;UBERON:0006240!2.80e-40!41;UBERON:0002020!2.54e-34!34;UBERON:0003528!2.54e-34!34;UBERON:0001893!2.90e-34!34;UBERON:0002791!4.15e-33!33;UBERON:0001869!5.30e-32!32;UBERON:0007023!1.69e-31!115;UBERON:0000924!2.97e-31!173;UBERON:0006601!2.97e-31!173;UBERON:0003056!9.20e-31!61;UBERON:0004121!1.60e-30!169;UBERON:0000153!7.33e-30!129;UBERON:0007811!7.33e-30!129;UBERON:0000033!8.55e-29!123;UBERON:0000956!1.09e-24!25;UBERON:0000203!1.09e-24!25;UBERON:0002619!7.54e-21!22;UBERON:0003076!4.20e-19!15;UBERON:0003057!4.20e-19!15;UBERON:0001950!5.66e-19!20;UBERON:0004732!3.83e-17!13;UBERON:0000475!1.25e-16!365;UBERON:0004733!5.86e-16!12;UBERON:0002028!5.86e-16!12;UBERON:0007277!5.86e-16!12;UBERON:0002680!7.01e-13!9;UBERON:0001895!7.01e-13!9;UBERON:0010092!7.01e-13!9;UBERON:0000468!2.34e-11!659;UBERON:0000467!2.50e-11!625;UBERON:0000480!3.01e-11!626;UBERON:0002308!4.93e-11!9;UBERON:0000125!4.93e-11!9;UBERON:0002298!2.55e-10!8;UBERON:0000483!9.17e-10!309;UBERON:0000119!1.84e-09!312;UBERON:0002037!3.18e-09!6;UBERON:0006215!3.18e-09!6;UBERON:0000025!4.73e-09!194;UBERON:0000922!4.93e-09!612;UBERON:0000200!1.11e-08!6;UBERON:0009663!1.29e-08!7;UBERON:0002050!1.41e-08!605;UBERON:0005423!1.41e-08!605;UBERON:0000062!2.36e-08!511;UBERON:0002420!3.10e-08!9;UBERON:0007245!3.10e-08!9;UBERON:0010009!3.10e-08!9;UBERON:0010011!3.10e-08!9;UBERON:0000454!3.10e-08!9;UBERON:0000923!3.10e-08!604;UBERON:0005291!3.10e-08!604;UBERON:0006598!3.10e-08!604;UBERON:0002532!3.10e-08!604;UBERON:0000064!3.44e-08!219;UBERON:0001872!9.59e-08!5;UBERON:0001894!2.41e-07!7;UBERON:0006222!2.41e-07!7;UBERON:0004111!2.47e-07!241 | ||
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|short_description=p11@LINC00478 | |short_description=p11@LINC00478 | ||
}} | }} |
Latest revision as of 19:25, 17 September 2015
Short description: | p11@LINC00478 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_LINC00478_5end |
Coexpression cluster: | C1328_extraskeletal_cerebellum_brain_duodenum_occipital_parietal_temporal |
Association with transcript: | 22bp_to_ENST00000458468, NR_027790, uc002ykb.2_5end |
EntrezGene: | LINC00478 |
HGNC: | 1274 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.22e-11 | 7 |
macroglial cell | 2.22e-11 | 7 |
astrocyte | 2.22e-11 | 7 |
oligodendrocyte precursor cell | 2.22e-11 | 7 |
astrocyte of the cerebral cortex | 2.04e-10 | 3 |
neural cell | 6.16e-10 | 25 |
neuronal stem cell | 8.42e-07 | 8 |