FFCP PHASE1:Hg19::chr12:24102576..24102623,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6660 | |EntrezGene=6660 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11201 | |HGNC=11201 | ||
|TSSclassifier=strong | |||
|UniProt=F5H0I3 | |UniProt=F5H0I3 | ||
|association_with_transcript=0bp_to_ENST00000537393_5end | |association_with_transcript=0bp_to_ENST00000537393_5end | ||
|cluster_id=chr12:24102576..24102623,- | |||
|coexpression_cluster_id=C3267 | |||
|description=CAGE_peak_2_at_SOX5_5end | |description=CAGE_peak_2_at_SOX5_5end | ||
|id=chr12:24102576..24102623,- | |id=chr12:24102576..24102623,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.59e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.16e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.16e-15;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.50e-45!57;UBERON:0005068!1.50e-45!57;UBERON:0006241!1.50e-45!57;UBERON:0007135!1.50e-45!57;UBERON:0001017!5.87e-42!82;UBERON:0005743!1.45e-41!86;UBERON:0002780!1.68e-40!41;UBERON:0001890!1.68e-40!41;UBERON:0006240!1.68e-40!41;UBERON:0003080!3.98e-39!42;UBERON:0002616!8.39e-39!59;UBERON:0000073!4.96e-38!94;UBERON:0001016!4.96e-38!94;UBERON:0003075!2.13e-36!86;UBERON:0007284!2.13e-36!86;UBERON:0000955!2.00e-35!69;UBERON:0006238!2.00e-35!69;UBERON:0002346!2.90e-35!90;UBERON:0007023!3.79e-34!115;UBERON:0001893!6.05e-34!34;UBERON:0002020!7.88e-34!34;UBERON:0003528!7.88e-34!34;UBERON:0002791!6.15e-33!33;UBERON:0001869!2.73e-32!32;UBERON:0003056!1.84e-29!61;UBERON:0000956!3.38e-26!25;UBERON:0000203!3.38e-26!25;UBERON:0002619!3.62e-23!22;UBERON:0004121!1.71e-22!169;UBERON:0000924!2.89e-22!173;UBERON:0006601!2.89e-22!173;UBERON:0000033!1.04e-21!123;UBERON:0000153!3.22e-21!129;UBERON:0007811!3.22e-21!129;UBERON:0001950!3.98e-21!20;UBERON:0000025!8.26e-13!194;UBERON:0004111!2.93e-11!241;UBERON:0000477!3.77e-11!286;UBERON:0000481!1.21e-10!347;UBERON:0000483!1.87e-09!309;UBERON:0002420!2.40e-09!9;UBERON:0007245!2.40e-09!9;UBERON:0010009!2.40e-09!9;UBERON:0010011!2.40e-09!9;UBERON:0000454!2.40e-09!9;UBERON:0000119!4.25e-09!312;UBERON:0001871!4.95e-09!7;UBERON:0002308!5.04e-09!9;UBERON:0000125!5.04e-09!9;UBERON:0003076!4.24e-08!15;UBERON:0003057!4.24e-08!15;UBERON:0000475!6.04e-08!365;UBERON:0001894!7.25e-08!7;UBERON:0006222!7.25e-08!7;UBERON:0000922!7.34e-08!612;UBERON:0000062!1.99e-07!511;UBERON:0009663!2.16e-07!7;UBERON:0000200!3.03e-07!6 | |ontology_enrichment_uberon=UBERON:0001049!1.50e-45!57;UBERON:0005068!1.50e-45!57;UBERON:0006241!1.50e-45!57;UBERON:0007135!1.50e-45!57;UBERON:0001017!5.87e-42!82;UBERON:0005743!1.45e-41!86;UBERON:0002780!1.68e-40!41;UBERON:0001890!1.68e-40!41;UBERON:0006240!1.68e-40!41;UBERON:0003080!3.98e-39!42;UBERON:0002616!8.39e-39!59;UBERON:0000073!4.96e-38!94;UBERON:0001016!4.96e-38!94;UBERON:0003075!2.13e-36!86;UBERON:0007284!2.13e-36!86;UBERON:0000955!2.00e-35!69;UBERON:0006238!2.00e-35!69;UBERON:0002346!2.90e-35!90;UBERON:0007023!3.79e-34!115;UBERON:0001893!6.05e-34!34;UBERON:0002020!7.88e-34!34;UBERON:0003528!7.88e-34!34;UBERON:0002791!6.15e-33!33;UBERON:0001869!2.73e-32!32;UBERON:0003056!1.84e-29!61;UBERON:0000956!3.38e-26!25;UBERON:0000203!3.38e-26!25;UBERON:0002619!3.62e-23!22;UBERON:0004121!1.71e-22!169;UBERON:0000924!2.89e-22!173;UBERON:0006601!2.89e-22!173;UBERON:0000033!1.04e-21!123;UBERON:0000153!3.22e-21!129;UBERON:0007811!3.22e-21!129;UBERON:0001950!3.98e-21!20;UBERON:0000025!8.26e-13!194;UBERON:0004111!2.93e-11!241;UBERON:0000477!3.77e-11!286;UBERON:0000481!1.21e-10!347;UBERON:0000483!1.87e-09!309;UBERON:0002420!2.40e-09!9;UBERON:0007245!2.40e-09!9;UBERON:0010009!2.40e-09!9;UBERON:0010011!2.40e-09!9;UBERON:0000454!2.40e-09!9;UBERON:0000119!4.25e-09!312;UBERON:0001871!4.95e-09!7;UBERON:0002308!5.04e-09!9;UBERON:0000125!5.04e-09!9;UBERON:0003076!4.24e-08!15;UBERON:0003057!4.24e-08!15;UBERON:0000475!6.04e-08!365;UBERON:0001894!7.25e-08!7;UBERON:0006222!7.25e-08!7;UBERON:0000922!7.34e-08!612;UBERON:0000062!1.99e-07!511;UBERON:0009663!2.16e-07!7;UBERON:0000200!3.03e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.08e-45;32!UBERON:0002791;1.36e-45;32!UBERON:0002780;1.68e-45;41!UBERON:0001890;1.68e-45;41!UBERON:0001893;1.91e-45;34!UBERON:0003528;2.32e-45;34!UBERON:0002020;2.32e-45;34!UBERON:0000956;1.22e-40;25!UBERON:0000203;1.22e-40;25!UBERON:0000073;3.44e-37;53!UBERON:0002616;3.44e-37;53!UBERON:0002619;8.22e-36;22!UBERON:0001950;1.48e-32;20!UBERON:0001017;1.90e-24;75!UBERON:0000955;5.81e-24;68!UBERON:0001016;3.43e-20;83!UBERON:0002420;6.43e-14;9!UBERON:0007245;6.43e-14;9!UBERON:0010009;6.43e-14;9!UBERON:0010011;6.43e-14;9!UBERON:0000454;6.43e-14;9!UBERON:0000125;2.10e-13;9!UBERON:0002308;2.10e-13;9!UBERON:0001871;8.48e-12;6!UBERON:0001894;1.27e-11;7!UBERON:0009663;7.55e-11;7!UBERON:0000200;1.40e-10;6!UBERON:0011216;8.12e-10;132!UBERON:0002298;1.17e-09;6!UBERON:0000349;2.16e-09;5!UBERON:0007023;4.01e-09;114!UBERON:0001872;5.15e-09;5!UBERON:0002021;8.49e-09;5!UBERON:0003296;5.03e-08;4!UBERON:0010133;5.03e-08;4!UBERON:0002368;2.72e-07;33!UBERON:0002784;3.31e-07;4!UBERON:0000369;3.48e-07;4!UBERON:0002435;3.48e-07;4!UBERON:0000204;3.48e-07;4!UBERON:0002107;7.42e-07;19!UBERON:0006925;7.42e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.13e-69,56;UBERON:0005068,1.13e-69,56;UBERON:0006241,1.13e-69,56;UBERON:0007135,1.13e-69,56;UBERON:0000073,2.84e-65,53;UBERON:0002616,2.84e-65,53;UBERON:0002780,1.60e-63,41;UBERON:0001890,1.60e-63,41;UBERON:0003080,1.60e-63,41;UBERON:0006240,1.60e-63,41;UBERON:0001017,4.12e-63,81;UBERON:0001016,3.97e-59,89;UBERON:0000955,1.47e-53,68;UBERON:0006238,1.47e-53,68;UBERON:0001893,4.63e-53,34;UBERON:0003528,7.05e-53,34;UBERON:0002020,7.05e-53,34;UBERON:0003075,6.64e-52,82;UBERON:0007284,6.64e-52,82;UBERON:0002346,6.48e-51,86;UBERON:0001869,2.02e-50,32;UBERON:0002791,3.52e-50,32;UBERON:0003056,1.91e-44,61;UBERON:0000956,1.05e-40,25;UBERON:0000203,1.05e-40,25;UBERON:0010371,1.00e-38,104;UBERON:0002619,7.05e-36,22;UBERON:0011216,1.46e-35,223;UBERON:0004121,1.00e-32,171;UBERON:0000924,1.00e-32,171;UBERON:0006601,1.00e-32,171;UBERON:0001950,1.26e-32,20;UBERON:0007023,3.56e-31,114;UBERON:0010314,4.16e-28,132;UBERON:0000025,5.76e-21,192;UBERON:0004111,8.19e-16,240;UBERON:0002420,6.65e-14,9;UBERON:0007245,6.65e-14,9;UBERON:0010009,6.65e-14,9;UBERON:0010011,6.65e-14,9;UBERON:0000454,6.65e-14,9;UBERON:0000125,2.15e-13,9;UBERON:0002308,2.15e-13,9;UBERON:0001871,8.22e-12,6;UBERON:0000483,1.10e-11,306;UBERON:0001894,1.46e-11,7;UBERON:0006222,1.46e-11,7;UBERON:0000119,2.20e-11,309;UBERON:0009663,8.18e-11,7;UBERON:0000200,1.40e-10,6;UBERON:0002298,1.15e-09,6;UBERON:0000349,2.08e-09,5;UBERON:0003076,2.70e-09,15;UBERON:0003057,2.70e-09,15;UBERON:0001872,4.70e-09,5;UBERON:0002021,7.76e-09,5;UBERON:0003296,5.59e-08,4;UBERON:0010133,5.59e-08,4;UBERON:0002368,2.41e-07,35;UBERON:0000922,3.06e-07,592;UBERON:0002784,3.43e-07,4;UBERON:0000369,3.78e-07,4;UBERON:0002435,3.78e-07,4;UBERON:0000204,3.78e-07,4;UBERON:0010082,3.78e-07,4;UBERON:0002107,6.72e-07,19;UBERON:0006925,6.72e-07,19;UBERON:0008836,6.72e-07,19 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.866364470720326,0.994192127183747,0,0,0,0,0.492484232307152,0,0,15.170507317946,9.17058647988324,10.796667005153,0.229240217243854,0.328402357799783,0.314843125254717,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,1.0843174571537,0,4.20054904986389,43.7407270878105,58.3961844363163,1.70162670895322,0.886917589850256,0.351339142772504,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0.933633106199299,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,0.397589304964456,0.464775771478074,3.73179798055334,2.01856680700503,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4079531339648,3.9313088667105,4.13552934676983,0,1.35287282397425,0,0,0,0,0,0,0,0,3.014190529352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.25248486685276,0.190493682876507,0,0,3.4214489204541,0.616964956219941,0,1.42913216315289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,20.3275699377971,29.932166387253,17.0123538811093,20.1019518401219,22.9657950595139,0,0,0,1.96306386750624,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0,2.53804844142407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,5.87333766392017,0,0,0,0,0,0.48335359146061,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0,0,0,7.71979166369589,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,3.15537356548735,0,0,0,0,0,7.95318118213038,15.8956440543879,0,0,0,1.19548792950642,0.276283915531148,4.78672220923124,0,0,0,0,0,0,0.493217028184668,0,0,2.90799823828566,6.95760736213884,19.9613798001194,0,0,0,0,0.508507300585533,0,0,0,10.7647496858641,5.31444831488303,7.83876851065152,0,7.07707263559838,0.886642856860642,3.07139556015562,0,0,0.461701551022782,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0.37950746544837,0,0,0.816164040795739,0.141353071433941,48.2546666624863,0,0.0884575645033392,0.611030144933625,0,0,0,4.04406797884062,0,3.04543779442941,0,0.19566461893209,0,0,1.20990716048664,60.2963340412066,0.252746318513952,1.9542044523884,0.622129148383483,0,0,0,0,0,0.416024019039416,0.347119476670262,0,0,0.17472666824203,0,0,0,0,0,0,2.93774963014692,0,0,10.0031057610288,0,0.561111741760736,0.213452994739353,0,0,1.94712213482057,6.52060991875465,0,0.124252535565433,0,0,0,0,0,2.40168115483916,4.92859364011175,0,0,0,4.18923601908381,1.83328339209347,0,0,0,0,0.335917362433631,0,5.82479747637269,17.6474328368181,17.4721619768073,17.9293426652132,0,0,11.1332156573302,12.8031201744881,0,0,0,0,0,13.9116484746876,0,0.0788057072991982,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63794020620548,1.32506888912221,3.74920573448497,6.87609529061988,0,0,0.320362237703084,1.72924735609633,0,0,0.592834895693833,1.58330377895165,0,0,0,0,0,0,6.2024772597689,8.90791733784331,11.767947486411,2.29363678276028,5.99016878299002,6.08544748825558,0,0.124980407962107,3.03298235083296,0.285465333544967,0,0,0.579684114443301,0.149254802886874,0,0,1.51522404220071,0.754703705257725,0.889811221596536,0,0,0.466311601748341,0.295710299979268,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3693827113798,0,0,0,0,0,0,0,0,0,0,0,0,0,9.33628910516657,1.1860729253635,0,0,0,0,12.8893194829362,0,0,2.20812886003509,5.60399523799829,0,0,7.83596546176806,5.6678630530234,7.98169295285756,6.97395638418567,43.6084034463572,4.14943514785307,8.39673357285626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.99556252352241,3.90539049306924,9.92096623205684,9.44895571889212,63.9960526551317,1.09651553371436,0,0,0.127762427639595,9.10693120993088,11.0973628332212,12.1393120847326,15.0257046291856,0.79832133146375,0.345701962667338,3.94422421706063,17.6721305739762,6.77459567697346,0.236387681767936,0,0.549451649953598,5.18481446722806,0,0.913158720509496,1.29556554731173,0,3.35939757630285,0,2.78979420883501,0,0,0.828864656652147,0,0,6.88363774112444,0,0,0.423387050190929,0,0,0,4.80978356730507,0.196300467230486,0,0,0,0,0.485710993059139,1.16969731731053,4.17796627838873,0,0.11294608203896,0.329821550236287,0.452888530700021,0.0771741581079447,0.218559560503957,23.5158648180761,0.245148321753905,3.29947165942276,3.33724394095407,7.42616000817715,8.8757702792514,0,0.469919589899268,0.45120521581504,0,0,0,0,0.730336388246517,4.12856355064087,5.3035645766037,2.83988811947732,5.91525964660958,70.2524611448008,1.058053681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| ||
|short_description=p2@SOX5 | |short_description=p2@SOX5 | ||
}} | }} |
Latest revision as of 20:57, 17 September 2015
Short description: | p2@SOX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SOX5_5end |
Coexpression cluster: | C3267_temporal_parietal_duodenum_Chondrocyte_colon_occipital_Neural |
Association with transcript: | 0bp_to_ENST00000537393_5end |
EntrezGene: | SOX5 |
HGNC: | 11201 |
UniProt: | F5H0I3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.16e-08 | 12 |