FFCP PHASE1:Hg19::chr13:95364963..95364978,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=39807 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000438290,uc001vmb.1_5end | |||
|cluster_id=chr13:95364963..95364978,+ | |||
|coexpression_cluster_id=C2273 | |||
|description=CAGE_peak_1_at_SOX21-AS1_5end | |||
|id=chr13:95364963..95364978,+ | |||
|ontology_enrichment_celltype=CL:0002319!5.30e-11!25;CL:0000047!2.25e-09!8;CL:0000128!4.26e-08!7;CL:0000126!4.26e-08!7;CL:0000127!4.26e-08!7;CL:0002453!4.26e-08!7;CL:0002322!7.96e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;5.01e-12;5!CL:0002605;6.74e-10;3!CL:0002319;1.72e-08;25!CL:0000047;5.86e-07;2!CL:0000128;8.90e-07;7!CL:0000126;8.90e-07;7!CL:0000127;8.90e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.19e-12,5;CL:0002605,6.58e-10,3;CL:0000047,6.07e-09,8;CL:0002319,1.67e-08,25;CL:0000128,7.51e-07,7;CL:0000126,7.51e-07,7;CL:0000127,7.51e-07,7;CL:0002453,7.51e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.71e-13;82!UBERON:0006241;1.24e-08;3!UBERON:0003057;1.24e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.64e-60!82;UBERON:0005743!8.90e-57!86;UBERON:0001049!2.09e-55!57;UBERON:0005068!2.09e-55!57;UBERON:0006241!2.09e-55!57;UBERON:0007135!2.09e-55!57;UBERON:0000073!1.62e-49!94;UBERON:0001016!1.62e-49!94;UBERON:0000955!8.15e-46!69;UBERON:0006238!8.15e-46!69;UBERON:0002616!1.72e-45!59;UBERON:0002780!5.79e-43!41;UBERON:0001890!5.79e-43!41;UBERON:0006240!5.79e-43!41;UBERON:0003075!1.49e-42!86;UBERON:0007284!1.49e-42!86;UBERON:0003080!1.17e-41!42;UBERON:0002346!7.48e-40!90;UBERON:0001893!1.94e-39!34;UBERON:0002020!4.15e-39!34;UBERON:0003528!4.15e-39!34;UBERON:0002791!5.35e-38!33;UBERON:0001869!1.91e-36!32;UBERON:0000153!1.01e-31!129;UBERON:0007811!1.01e-31!129;UBERON:0003056!1.06e-31!61;UBERON:0000033!1.19e-31!123;UBERON:0004121!5.67e-30!169;UBERON:0000956!2.76e-29!25;UBERON:0000203!2.76e-29!25;UBERON:0000924!8.94e-29!173;UBERON:0006601!8.94e-29!173;UBERON:0007023!2.75e-26!115;UBERON:0002619!1.52e-24!22;UBERON:0001950!1.16e-21!20;UBERON:0003076!2.35e-14!15;UBERON:0003057!2.35e-14!15;UBERON:0000025!4.47e-13!194;UBERON:0004111!3.22e-12!241;UBERON:0002420!1.11e-11!9;UBERON:0007245!1.11e-11!9;UBERON:0010009!1.11e-11!9;UBERON:0010011!1.11e-11!9;UBERON:0000454!1.11e-11!9;UBERON:0000064!3.07e-11!219;UBERON:0002308!3.88e-11!9;UBERON:0000125!3.88e-11!9;UBERON:0004733!1.97e-10!12;UBERON:0002028!1.97e-10!12;UBERON:0007277!1.97e-10!12;UBERON:0000477!6.79e-10!286;UBERON:0000475!8.31e-10!365;UBERON:0000200!8.35e-10!6;UBERON:0004732!1.90e-09!13;UBERON:0000349!3.46e-09!5;UBERON:0002298!5.40e-09!8;UBERON:0009663!1.16e-08!7;UBERON:0002021!4.87e-08!5;UBERON:0000922!8.58e-08!612;UBERON:0000483!8.67e-08!309;UBERON:0000119!1.51e-07!312;UBERON:0001871!2.28e-07!7;UBERON:0002680!5.87e-07!9;UBERON:0001895!5.87e-07!9;UBERON:0010092!5.87e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.43e-56;34!UBERON:0003528;4.96e-56;34!UBERON:0002020;4.96e-56;34!UBERON:0001869;1.56e-55;32!UBERON:0002791;1.69e-55;32!UBERON:0000956;1.75e-49;25!UBERON:0000203;1.75e-49;25!UBERON:0002780;3.11e-49;41!UBERON:0001890;3.11e-49;41!UBERON:0002619;1.99e-41;22!UBERON:0000073;9.64e-38;53!UBERON:0002616;9.64e-38;53!UBERON:0001950;1.95e-36;20!UBERON:0001017;4.76e-27;75!UBERON:0000955;4.17e-25;68!UBERON:0001016;1.05e-20;83!UBERON:0002420;1.14e-18;9!UBERON:0007245;1.14e-18;9!UBERON:0010009;1.14e-18;9!UBERON:0010011;1.14e-18;9!UBERON:0000454;1.14e-18;9!UBERON:0000125;1.14e-17;9!UBERON:0002308;1.14e-17;9!UBERON:0000200;2.15e-15;6!UBERON:0000349;1.40e-14;5!UBERON:0009663;1.45e-13;7!UBERON:0002021;1.40e-12;5!UBERON:0001871;1.15e-09;6!UBERON:0007023;3.08e-09;114!UBERON:0001872;4.49e-09;5!UBERON:0011216;6.15e-09;132!UBERON:0001870;1.24e-08;3!UBERON:0002240;1.24e-08;3!UBERON:0005174;1.24e-08;3!UBERON:0001137;1.24e-08;3!UBERON:0002298;5.17e-07;6!UBERON:0001876;6.12e-07;2!UBERON:0001954;9.32e-07;2!UBERON:0003022;9.32e-07;2!UBERON:0002421;9.32e-07;2!UBERON:0002600;9.32e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.36e-72,81;UBERON:0001049,1.56e-72,56;UBERON:0005068,1.56e-72,56;UBERON:0006241,1.56e-72,56;UBERON:0007135,1.56e-72,56;UBERON:0002780,6.61e-70,41;UBERON:0001890,6.61e-70,41;UBERON:0003080,6.61e-70,41;UBERON:0006240,6.61e-70,41;UBERON:0001893,7.05e-67,34;UBERON:0003528,2.58e-66,34;UBERON:0002020,2.58e-66,34;UBERON:0000073,1.16e-65,53;UBERON:0002616,1.16e-65,53;UBERON:0001016,3.82e-64,89;UBERON:0002791,5.98e-62,32;UBERON:0001869,8.69e-62,32;UBERON:0000955,6.87e-57,68;UBERON:0006238,6.87e-57,68;UBERON:0003075,2.61e-51,82;UBERON:0007284,2.61e-51,82;UBERON:0003056,6.57e-50,61;UBERON:0000956,2.49e-49,25;UBERON:0000203,2.49e-49,25;UBERON:0002346,2.18e-48,86;UBERON:0002619,2.86e-41,22;UBERON:0010371,6.33e-40,104;UBERON:0001950,2.27e-36,20;UBERON:0004121,2.82e-36,171;UBERON:0000924,2.82e-36,171;UBERON:0006601,2.82e-36,171;UBERON:0007023,7.35e-32,114;UBERON:0010314,1.06e-30,132;UBERON:0011216,4.68e-28,223;UBERON:0002420,6.39e-19,9;UBERON:0007245,6.39e-19,9;UBERON:0010009,6.39e-19,9;UBERON:0010011,6.39e-19,9;UBERON:0000454,6.39e-19,9;UBERON:0000125,5.37e-18,9;UBERON:0002308,5.37e-18,9;UBERON:0000200,1.98e-15,6;UBERON:0000025,2.88e-15,192;UBERON:0000349,2.16e-14,5;UBERON:0009663,7.93e-14,7;UBERON:0004111,5.42e-13,240;UBERON:0002021,1.83e-12,5;UBERON:0001871,1.37e-09,6;UBERON:0001872,4.66e-09,5;UBERON:0002240,1.09e-08,3;UBERON:0005174,1.09e-08,3;UBERON:0001137,1.09e-08,3;UBERON:0001870,1.15e-08,3;UBERON:0000483,8.05e-08,306;UBERON:0000119,1.22e-07,309;UBERON:0003076,1.41e-07,15;UBERON:0003057,1.41e-07,15;UBERON:0000922,4.11e-07,592;UBERON:0002298,5.54e-07,6;UBERON:0001876,6.49e-07,2;UBERON:0000369,8.66e-07,4;UBERON:0002435,8.66e-07,4;UBERON:0000204,8.66e-07,4;UBERON:0010082,8.66e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.940364164434263,15.7429792922081,13.6874425072884,5.90050406095573,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41802225746102,0,0.087834785693126,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70763188581434,1.45782745153634,1.39432731443422,1.96956004529204,1.26160425437814,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,4.17349457910277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.40150109623115,3.90419561572865,3.09315525111078,2.68026024534958,5.10351001322531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,1.01289087829486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46174797895425,1.35227839237992,0,0,0,0,0.121360521749513,0,0,0,0,0,7.95318118213038,3.23539657744179,0,0,0,0,0,0,1.84083628503879,0,0,0,2.50629644545853,0,0,0,0,6.78532922266653,1.85536196323703,0,0,0,0,0.796554137998498,1.01701460117107,0.472775363535873,0,0,0,0,3.37670028151142,0,0.774054819518572,0.886642856860642,2.63262476584767,0,0.83654246567162,0.153900517007594,0,0,0,0,0,0,0,0,0,1.82832850090172,0,0,0,0.189753732724185,0,0,0,0,0.649165919226273,0,0,0,0,0.370691816839509,0.313265848516366,2.83084758518844,0,2.10838001152805,0,4.10895699757388,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0,0,0,1.64881328030313,0,0,0,0,2.34249945036751,0.782205530939212,0.0801588202515337,0,0,0.864542502924636,0,0,0,0.621262677827163,0.235694034616795,0,0,0,0,1.80126086612937,3.83335060897581,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0.0984274815147488,0,3.18091875923721,3.13267834056624,0.160753148465019,0.275078873194468,0,0.2249738915515,0,1.88323625639876,0,0,0.0524545881349981,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16354660725395,1.98348902614035,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,2.51286554000375,1.77213635993397,1.58634144372552,3.254964198369,0.573409195690071,2.3295100822739,2.29756690883119,0.276697269872462,0.37494122388632,0,0,0.470531639396343,0,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,2.48865185073115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14723202972652,1.41696576325585,2.39450788585727,2.66651273512982,1.00828678488687,1.65977405914123,3.71393984953257,0,0.196295437002051,1.29766695682514,0,0,0,0.690359926060101,0.198916222116275,0,0,0,0,0,0,2.566428215499,7.02970288752463,3.30698874401895,1.71222687523548,0,0,0,0,0.255524855279191,1.07140367175657,0,0,0.227662191351298,0,0,0,0.951576261675644,2.23627430113687,0,0.889851215136553,0,1.88538707899202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.77939922312,0,0,0.33883824611688,0,0.301925687133347,0,0,0,0,0.235676547101626,2.94462700672418,3.56455680392503,1.2679671827502,0,0,0,0,0.178553938605658,0,0,0.730336388246517,0.458729283404541,3.44014999563483,0,2.03974470572744,0.436350690340377,0,0,0,0,4.03732559472253,5.13548188229369,0.126698501011437,0.917899467677836,2.93939145792117,0,0,0,0,3.31667775783512,1.55149493792843,0.639701945702943,0.714193294391221,0,0,0,0,0,0,1.36893320434112,1.68380132536469,1.00411087549747,2.32862249582209,0.976839223331694,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@SOX21-AS1 | |||
}} |
Latest revision as of 05:41, 18 September 2015
Short description: | p1@SOX21-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SOX21-AS1_5end |
Coexpression cluster: | C2273_Neural_Astrocyte_small_teratocarcinoma_testicular_brain_Neurons |
Association with transcript: | 0bp_to_ENST00000438290, uc001vmb.1_5end |
EntrezGene: | NA |
HGNC: | 39807 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.19e-12 | 5 |
astrocyte of the cerebral cortex | 6.58e-10 | 3 |
neuronal stem cell | 6.07e-09 | 8 |
neural cell | 1.67e-08 | 25 |
oligodendrocyte | 7.51e-07 | 7 |
macroglial cell | 7.51e-07 | 7 |
astrocyte | 7.51e-07 | 7 |
oligodendrocyte precursor cell | 7.51e-07 | 7 |