FFCP PHASE1:Hg19::chr2:17773341..17773362,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7447 | |EntrezGene=7447 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12722 | |HGNC=12722 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AB528541,DQ890800,DQ893955_5end | |association_with_transcript=0bp_to_AB528541,DQ890800,DQ893955_5end | ||
|cluster_id=chr2:17773341..17773362,+ | |||
|coexpression_cluster_id=C16 | |coexpression_cluster_id=C16 | ||
|description=CAGE_peak_6_at_VSNL1_5end | |description=CAGE_peak_6_at_VSNL1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.39e-19;3!UBERON:0006601;7.83e-16;82 | |ontology_enrichment_development_v019=UBERON:0006215;4.39e-19;3!UBERON:0006601;7.83e-16;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.85e-54!82;UBERON:0005743!2.34e-51!86;UBERON:0001049!2.13e-50!57;UBERON:0005068!2.13e-50!57;UBERON:0006241!2.13e-50!57;UBERON:0007135!2.13e-50!57;UBERON:0000073!2.14e-47!94;UBERON:0001016!2.14e-47!94;UBERON:0000955!1.31e-44!69;UBERON:0006238!1.31e-44!69;UBERON:0002616!5.00e-43!59;UBERON:0002780!1.13e-34!41;UBERON:0001890!1.13e-34!41;UBERON:0006240!1.13e-34!41;UBERON:0007023!7.03e-34!115;UBERON:0001893!8.99e-34!34;UBERON:0003075!9.67e-34!86;UBERON:0007284!9.67e-34!86;UBERON:0003080!1.11e-33!42;UBERON:0002020!1.42e-33!34;UBERON:0003528!1.42e-33!34;UBERON:0001869!4.23e-33!32;UBERON:0002619!6.60e-33!22;UBERON:0001950!1.60e-32!20;UBERON:0004121!2.05e-32!169;UBERON:0000033!7.36e-32!123;UBERON:0002346!9.46e-32!90;UBERON:0002791!1.25e-31!33;UBERON:0000924!2.51e-31!173;UBERON:0006601!2.51e-31!173;UBERON:0000153!3.19e-31!129;UBERON:0007811!3.19e-31!129;UBERON:0000956!1.77e-28!25;UBERON:0000203!1.77e-28!25;UBERON:0003056!5.90e-21!61;UBERON:0003076!1.12e-17!15;UBERON:0003057!1.12e-17!15;UBERON:0000200!1.88e-16!6;UBERON:0004733!1.64e-15!12;UBERON:0002028!1.64e-15!12;UBERON:0007277!1.64e-15!12;UBERON:0004732!3.63e-14!13;UBERON:0002021!1.40e-12!5;UBERON:0001871!1.32e-11!7;UBERON:0000025!2.34e-11!194;UBERON:0002298!1.01e-10!8;UBERON:0000475!3.33e-10!365;UBERON:0004111!3.52e-10!241;UBERON:0002680!1.01e-09!9;UBERON:0001895!1.01e-09!9;UBERON:0010092!1.01e-09!9;UBERON:0002771!4.54e-09!3;UBERON:0000064!1.19e-08!219;UBERON:0000349!2.19e-08!5;UBERON:0000988!3.22e-08!3;UBERON:0000483!4.53e-08!309;UBERON:0001896!4.98e-08!3;UBERON:0005290!4.98e-08!3;UBERON:0010096!4.98e-08!3;UBERON:0000477!6.30e-08!286;UBERON:0000119!7.06e-08!312;UBERON:0003729!2.81e-07!5;UBERON:0002420!5.78e-07!9;UBERON:0007245!5.78e-07!9;UBERON:0010009!5.78e-07!9;UBERON:0010011!5.78e-07!9;UBERON:0000454!5.78e-07!9;UBERON:0002308!7.18e-07!9;UBERON:0000125!7.18e-07!9 | |ontology_enrichment_uberon=UBERON:0001017!1.85e-54!82;UBERON:0005743!2.34e-51!86;UBERON:0001049!2.13e-50!57;UBERON:0005068!2.13e-50!57;UBERON:0006241!2.13e-50!57;UBERON:0007135!2.13e-50!57;UBERON:0000073!2.14e-47!94;UBERON:0001016!2.14e-47!94;UBERON:0000955!1.31e-44!69;UBERON:0006238!1.31e-44!69;UBERON:0002616!5.00e-43!59;UBERON:0002780!1.13e-34!41;UBERON:0001890!1.13e-34!41;UBERON:0006240!1.13e-34!41;UBERON:0007023!7.03e-34!115;UBERON:0001893!8.99e-34!34;UBERON:0003075!9.67e-34!86;UBERON:0007284!9.67e-34!86;UBERON:0003080!1.11e-33!42;UBERON:0002020!1.42e-33!34;UBERON:0003528!1.42e-33!34;UBERON:0001869!4.23e-33!32;UBERON:0002619!6.60e-33!22;UBERON:0001950!1.60e-32!20;UBERON:0004121!2.05e-32!169;UBERON:0000033!7.36e-32!123;UBERON:0002346!9.46e-32!90;UBERON:0002791!1.25e-31!33;UBERON:0000924!2.51e-31!173;UBERON:0006601!2.51e-31!173;UBERON:0000153!3.19e-31!129;UBERON:0007811!3.19e-31!129;UBERON:0000956!1.77e-28!25;UBERON:0000203!1.77e-28!25;UBERON:0003056!5.90e-21!61;UBERON:0003076!1.12e-17!15;UBERON:0003057!1.12e-17!15;UBERON:0000200!1.88e-16!6;UBERON:0004733!1.64e-15!12;UBERON:0002028!1.64e-15!12;UBERON:0007277!1.64e-15!12;UBERON:0004732!3.63e-14!13;UBERON:0002021!1.40e-12!5;UBERON:0001871!1.32e-11!7;UBERON:0000025!2.34e-11!194;UBERON:0002298!1.01e-10!8;UBERON:0000475!3.33e-10!365;UBERON:0004111!3.52e-10!241;UBERON:0002680!1.01e-09!9;UBERON:0001895!1.01e-09!9;UBERON:0010092!1.01e-09!9;UBERON:0002771!4.54e-09!3;UBERON:0000064!1.19e-08!219;UBERON:0000349!2.19e-08!5;UBERON:0000988!3.22e-08!3;UBERON:0000483!4.53e-08!309;UBERON:0001896!4.98e-08!3;UBERON:0005290!4.98e-08!3;UBERON:0010096!4.98e-08!3;UBERON:0000477!6.30e-08!286;UBERON:0000119!7.06e-08!312;UBERON:0003729!2.81e-07!5;UBERON:0002420!5.78e-07!9;UBERON:0007245!5.78e-07!9;UBERON:0010009!5.78e-07!9;UBERON:0010011!5.78e-07!9;UBERON:0000454!5.78e-07!9;UBERON:0002308!7.18e-07!9;UBERON:0000125!7.18e-07!9 | ||
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| ||
|short_description=p6@VSNL1 | |short_description=p6@VSNL1 | ||
}} | }} |
Latest revision as of 10:03, 18 September 2015
Short description: | p6@VSNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_VSNL1_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 0bp_to_AB528541, DQ890800, DQ893955_5end |
EntrezGene: | VSNL1 |
HGNC: | 12722 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data