FFCP PHASE1:Hg19::chr17:982198..982256,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29 | |EntrezGene=29 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=81 | |HGNC=81 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z683 | |UniProt=B7Z683 | ||
|association_with_transcript=0bp_to_ENST00000536794,uc010vqg.1_5end | |association_with_transcript=0bp_to_ENST00000536794,uc010vqg.1_5end | ||
|cluster_id=chr17:982198..982256,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_5_at_ABR_5end | |description=CAGE_peak_5_at_ABR_5end | ||
|id=chr17:982198..982256,- | |id=chr17:982198..982256,- | ||
|ontology_enrichment_celltype=CL:0000047!1.75e-13!8;CL:0002319!1.02e-10!25;CL:0000133!3.04e-10!59;CL:0000540!4.08e-10!6;CL:0000031!4.08e-10!6;CL:0000404!4.08e-10!6;CL:0000221!1.85e-07!71;CL:1000507!4.89e-07!12;CL:1000494!4.89e-07!12 | |ontology_enrichment_celltype=CL:0000047!1.75e-13!8;CL:0002319!1.02e-10!25;CL:0000133!3.04e-10!59;CL:0000540!4.08e-10!6;CL:0000031!4.08e-10!6;CL:0000404!4.08e-10!6;CL:0000221!1.85e-07!71;CL:1000507!4.89e-07!12;CL:1000494!4.89e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.65e-16;5!CL:0002605;7.63e-11;3!CL:0002319;1.53e-08;25!CL:0000047;4.30e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,7.52e-11,3;CL:0000047,8.49e-11,8;CL:0000133,1.32e-08,59;CL:0002319,1.60e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.42e-12;82!UBERON:0010122;1.96e-07;2 | |||
|ontology_enrichment_disease=DOID:169!8.86e-08!6;DOID:171!1.41e-07!10 | |ontology_enrichment_disease=DOID:169!8.86e-08!6;DOID:171!1.41e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:169;1.07e-13;6!DOID:171;4.61e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.21e-13,6;DOID:171,4.93e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.64e-63!94;UBERON:0001016!2.64e-63!94;UBERON:0001017!3.81e-63!82;UBERON:0005743!2.52e-59!86;UBERON:0001049!3.80e-51!57;UBERON:0005068!3.80e-51!57;UBERON:0006241!3.80e-51!57;UBERON:0007135!3.80e-51!57;UBERON:0002780!1.47e-49!41;UBERON:0001890!1.47e-49!41;UBERON:0006240!1.47e-49!41;UBERON:0003080!4.29e-48!42;UBERON:0000955!1.14e-47!69;UBERON:0006238!1.14e-47!69;UBERON:0001869!1.64e-46!32;UBERON:0002616!1.64e-46!59;UBERON:0001893!5.09e-46!34;UBERON:0002020!7.25e-46!34;UBERON:0003528!7.25e-46!34;UBERON:0002791!1.43e-44!33;UBERON:0002346!1.41e-42!90;UBERON:0003075!6.18e-42!86;UBERON:0007284!6.18e-42!86;UBERON:0003056!6.71e-39!61;UBERON:0000924!1.10e-38!173;UBERON:0006601!1.10e-38!173;UBERON:0004121!1.06e-37!169;UBERON:0000956!5.25e-36!25;UBERON:0000203!5.25e-36!25;UBERON:0002619!4.09e-31!22;UBERON:0000153!2.28e-30!129;UBERON:0007811!2.28e-30!129;UBERON:0000033!3.64e-29!123;UBERON:0001950!1.66e-28!20;UBERON:0007023!3.08e-25!115;UBERON:0000025!4.91e-16!194;UBERON:0000064!6.21e-15!219;UBERON:0001871!2.59e-13!7;UBERON:0000922!2.35e-12!612;UBERON:0002420!9.01e-12!9;UBERON:0007245!9.01e-12!9;UBERON:0010009!9.01e-12!9;UBERON:0010011!9.01e-12!9;UBERON:0000454!9.01e-12!9;UBERON:0004111!2.95e-11!241;UBERON:0002308!3.32e-11!9;UBERON:0000125!3.32e-11!9;UBERON:0000477!9.29e-11!286;UBERON:0000481!9.49e-11!347;UBERON:0000475!2.90e-10!365;UBERON:0000483!3.01e-10!309;UBERON:0002050!3.82e-10!605;UBERON:0005423!3.82e-10!605;UBERON:0000119!5.73e-10!312;UBERON:0000923!1.06e-09!604;UBERON:0005291!1.06e-09!604;UBERON:0006598!1.06e-09!604;UBERON:0002532!1.06e-09!604;UBERON:0000200!1.06e-09!6;UBERON:0000013!1.76e-09!5;UBERON:0002410!1.76e-09!5;UBERON:0000468!3.15e-09!659;UBERON:0009663!8.17e-09!7;UBERON:0000349!8.86e-09!5;UBERON:0002021!1.72e-08!5;UBERON:0000467!5.89e-08!625;UBERON:0000489!6.14e-08!32;UBERON:0000480!6.75e-08!626;UBERON:0000080!6.98e-08!18;UBERON:0002120!6.98e-08!18;UBERON:0004875!6.98e-08!18;UBERON:0005721!6.98e-08!18;UBERON:0005754!6.98e-08!18;UBERON:0007297!6.98e-08!18;UBERON:0000369!8.14e-08!4;UBERON:0002435!8.14e-08!4;UBERON:0000204!8.14e-08!4;UBERON:0010082!8.14e-08!4;UBERON:0000062!1.22e-07!511;UBERON:0002113!1.85e-07!27;UBERON:0003918!1.85e-07!27;UBERON:0005095!1.85e-07!27;UBERON:0007687!1.85e-07!27;UBERON:0009773!4.89e-07!12;UBERON:0001231!4.89e-07!12;UBERON:0004810!4.89e-07!12;UBERON:0006555!5.33e-07!17;UBERON:0005103!5.33e-07!17;UBERON:0000083!5.33e-07!17;UBERON:0009201!5.33e-07!17;UBERON:0004819!5.33e-07!17;UBERON:0006553!5.33e-07!17;UBERON:0003074!5.33e-07!17;UBERON:0003060!5.33e-07!17;UBERON:0004876!7.48e-07!20 | |ontology_enrichment_uberon=UBERON:0000073!2.64e-63!94;UBERON:0001016!2.64e-63!94;UBERON:0001017!3.81e-63!82;UBERON:0005743!2.52e-59!86;UBERON:0001049!3.80e-51!57;UBERON:0005068!3.80e-51!57;UBERON:0006241!3.80e-51!57;UBERON:0007135!3.80e-51!57;UBERON:0002780!1.47e-49!41;UBERON:0001890!1.47e-49!41;UBERON:0006240!1.47e-49!41;UBERON:0003080!4.29e-48!42;UBERON:0000955!1.14e-47!69;UBERON:0006238!1.14e-47!69;UBERON:0001869!1.64e-46!32;UBERON:0002616!1.64e-46!59;UBERON:0001893!5.09e-46!34;UBERON:0002020!7.25e-46!34;UBERON:0003528!7.25e-46!34;UBERON:0002791!1.43e-44!33;UBERON:0002346!1.41e-42!90;UBERON:0003075!6.18e-42!86;UBERON:0007284!6.18e-42!86;UBERON:0003056!6.71e-39!61;UBERON:0000924!1.10e-38!173;UBERON:0006601!1.10e-38!173;UBERON:0004121!1.06e-37!169;UBERON:0000956!5.25e-36!25;UBERON:0000203!5.25e-36!25;UBERON:0002619!4.09e-31!22;UBERON:0000153!2.28e-30!129;UBERON:0007811!2.28e-30!129;UBERON:0000033!3.64e-29!123;UBERON:0001950!1.66e-28!20;UBERON:0007023!3.08e-25!115;UBERON:0000025!4.91e-16!194;UBERON:0000064!6.21e-15!219;UBERON:0001871!2.59e-13!7;UBERON:0000922!2.35e-12!612;UBERON:0002420!9.01e-12!9;UBERON:0007245!9.01e-12!9;UBERON:0010009!9.01e-12!9;UBERON:0010011!9.01e-12!9;UBERON:0000454!9.01e-12!9;UBERON:0004111!2.95e-11!241;UBERON:0002308!3.32e-11!9;UBERON:0000125!3.32e-11!9;UBERON:0000477!9.29e-11!286;UBERON:0000481!9.49e-11!347;UBERON:0000475!2.90e-10!365;UBERON:0000483!3.01e-10!309;UBERON:0002050!3.82e-10!605;UBERON:0005423!3.82e-10!605;UBERON:0000119!5.73e-10!312;UBERON:0000923!1.06e-09!604;UBERON:0005291!1.06e-09!604;UBERON:0006598!1.06e-09!604;UBERON:0002532!1.06e-09!604;UBERON:0000200!1.06e-09!6;UBERON:0000013!1.76e-09!5;UBERON:0002410!1.76e-09!5;UBERON:0000468!3.15e-09!659;UBERON:0009663!8.17e-09!7;UBERON:0000349!8.86e-09!5;UBERON:0002021!1.72e-08!5;UBERON:0000467!5.89e-08!625;UBERON:0000489!6.14e-08!32;UBERON:0000480!6.75e-08!626;UBERON:0000080!6.98e-08!18;UBERON:0002120!6.98e-08!18;UBERON:0004875!6.98e-08!18;UBERON:0005721!6.98e-08!18;UBERON:0005754!6.98e-08!18;UBERON:0007297!6.98e-08!18;UBERON:0000369!8.14e-08!4;UBERON:0002435!8.14e-08!4;UBERON:0000204!8.14e-08!4;UBERON:0010082!8.14e-08!4;UBERON:0000062!1.22e-07!511;UBERON:0002113!1.85e-07!27;UBERON:0003918!1.85e-07!27;UBERON:0005095!1.85e-07!27;UBERON:0007687!1.85e-07!27;UBERON:0009773!4.89e-07!12;UBERON:0001231!4.89e-07!12;UBERON:0004810!4.89e-07!12;UBERON:0006555!5.33e-07!17;UBERON:0005103!5.33e-07!17;UBERON:0000083!5.33e-07!17;UBERON:0009201!5.33e-07!17;UBERON:0004819!5.33e-07!17;UBERON:0006553!5.33e-07!17;UBERON:0003074!5.33e-07!17;UBERON:0003060!5.33e-07!17;UBERON:0004876!7.48e-07!20 | ||
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| ||
|short_description=p5@ABR | |short_description=p5@ABR | ||
}} | }} |
Latest revision as of 17:22, 18 September 2015
Short description: | p5@ABR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ABR_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000536794, uc010vqg.1_5end |
EntrezGene: | ABR |
HGNC: | 81 |
UniProt: | B7Z683 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 7.52e-11 | 3 |
neuronal stem cell | 8.49e-11 | 8 |
neurectodermal cell | 1.32e-08 | 59 |
neural cell | 1.60e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.21e-13 | 6 |
neuroectodermal tumor | 4.93e-08 | 10 |