FFCP PHASE1:Hg19::chr1:183774285..183774294,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:183774285..183774294,+ to FFCP PHASE1:Hg19::chr1:183774285..183774294,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23179 | |EntrezGene=23179 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30281 | |HGNC=30281 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6U6 | |UniProt=F5H6U6 | ||
|association_with_transcript=0bp_to_ENST00000539189_5end | |||
|cluster_id=chr1:183774285..183774294,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_5_at_RGL1_5end | |||
|id=chr1:183774285..183774294,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.99e-09;6!CL:0002619;1.07e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.29e-09,6;CL:0002619,1.09e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.17e-07;82!UBERON:0006241;8.00e-07;3!UBERON:0003057;8.00e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.09e-28!115;UBERON:0001017!5.68e-22!82;UBERON:0001049!9.50e-22!57;UBERON:0005068!9.50e-22!57;UBERON:0006241!9.50e-22!57;UBERON:0007135!9.50e-22!57;UBERON:0005743!1.75e-21!86;UBERON:0002616!4.09e-21!59;UBERON:0000073!2.14e-20!94;UBERON:0001016!2.14e-20!94;UBERON:0000955!6.03e-18!69;UBERON:0006238!6.03e-18!69;UBERON:0003080!7.81e-17!42;UBERON:0002780!2.99e-16!41;UBERON:0001890!2.99e-16!41;UBERON:0006240!2.99e-16!41;UBERON:0002346!3.39e-16!90;UBERON:0001893!4.28e-16!34;UBERON:0002020!6.08e-16!34;UBERON:0003528!6.08e-16!34;UBERON:0002791!1.36e-15!33;UBERON:0003075!2.09e-15!86;UBERON:0007284!2.09e-15!86;UBERON:0001869!8.96e-15!32;UBERON:0000468!9.60e-15!659;UBERON:0000922!1.85e-13!612;UBERON:0002050!3.93e-13!605;UBERON:0005423!3.93e-13!605;UBERON:0000467!8.15e-13!625;UBERON:0000923!1.01e-12!604;UBERON:0005291!1.01e-12!604;UBERON:0006598!1.01e-12!604;UBERON:0002532!1.01e-12!604;UBERON:0000480!1.26e-12!626;UBERON:0000062!2.90e-11!511;UBERON:0000956!5.39e-11!25;UBERON:0000203!5.39e-11!25;UBERON:0003056!5.78e-11!61;UBERON:0002619!7.71e-11!22;UBERON:0000924!1.23e-10!173;UBERON:0006601!1.23e-10!173;UBERON:0004121!5.53e-10!169;UBERON:0001950!1.35e-09!20;UBERON:0000153!2.81e-09!129;UBERON:0007811!2.81e-09!129;UBERON:0000033!2.84e-09!123;UBERON:0000025!7.11e-09!194;UBERON:0000477!1.90e-08!286;UBERON:0004111!4.99e-08!241;UBERON:0000119!1.15e-07!312;UBERON:0000483!1.28e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.49e-24;34!UBERON:0003528;1.02e-23;34!UBERON:0002020;1.02e-23;34!UBERON:0001869;7.66e-23;32!UBERON:0002791;8.72e-23;32!UBERON:0002780;4.00e-20;41!UBERON:0001890;4.00e-20;41!UBERON:0000073;6.86e-19;53!UBERON:0002616;6.86e-19;53!UBERON:0002619;8.50e-19;22!UBERON:0000956;3.26e-18;25!UBERON:0000203;3.26e-18;25!UBERON:0001950;7.50e-16;20!UBERON:0001017;2.41e-14;75!UBERON:0001016;2.23e-12;83!UBERON:0000125;5.78e-12;9!UBERON:0002308;5.78e-12;9!UBERON:0000955;1.51e-11;68!UBERON:0002298;9.26e-11;6!UBERON:0000200;2.31e-10;6!UBERON:0001872;2.61e-09;5!UBERON:0002420;3.13e-09;9!UBERON:0007245;3.13e-09;9!UBERON:0010009;3.13e-09;9!UBERON:0010011;3.13e-09;9!UBERON:0000454;3.13e-09;9!UBERON:0009663;4.19e-09;7!UBERON:0000922;2.03e-08;49!UBERON:0007023;5.90e-07;114!UBERON:0002240;8.00e-07;3!UBERON:0005174;8.00e-07;3!UBERON:0001137;8.00e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.24e-34,56;UBERON:0005068,1.24e-34,56;UBERON:0006241,1.24e-34,56;UBERON:0007135,1.24e-34,56;UBERON:0001017,2.21e-31,81;UBERON:0000073,2.66e-30,53;UBERON:0002616,2.66e-30,53;UBERON:0001016,3.01e-30,89;UBERON:0001893,1.20e-28,34;UBERON:0003528,2.61e-28,34;UBERON:0002020,2.61e-28,34;UBERON:0007023,1.09e-27,114;UBERON:0002780,7.71e-27,41;UBERON:0001890,7.71e-27,41;UBERON:0003080,7.71e-27,41;UBERON:0006240,7.71e-27,41;UBERON:0002346,1.56e-26,86;UBERON:0000955,8.29e-26,68;UBERON:0006238,8.29e-26,68;UBERON:0002791,1.06e-25,32;UBERON:0001869,1.91e-25,32;UBERON:0003075,7.17e-25,82;UBERON:0007284,7.17e-25,82;UBERON:0010371,1.12e-19,104;UBERON:0002619,7.52e-19,22;UBERON:0003056,9.77e-19,61;UBERON:0000956,3.81e-18,25;UBERON:0000203,3.81e-18,25;UBERON:0004121,1.59e-16,171;UBERON:0000924,1.59e-16,171;UBERON:0006601,1.59e-16,171;UBERON:0001950,7.64e-16,20;UBERON:0010314,1.08e-15,132;UBERON:0011216,9.76e-15,223;UBERON:0000125,4.24e-12,9;UBERON:0002308,4.24e-12,9;UBERON:0000922,2.44e-11,592;UBERON:0002050,3.39e-11,564;UBERON:0002298,4.19e-11,6;UBERON:0000923,8.25e-11,560;UBERON:0010316,8.25e-11,560;UBERON:0005291,8.25e-11,560;UBERON:0006598,8.25e-11,560;UBERON:0010317,8.25e-11,560;UBERON:0002532,8.25e-11,560;UBERON:0005423,8.97e-11,581;UBERON:0000200,1.21e-10,6;UBERON:0002420,1.59e-09,9;UBERON:0007245,1.59e-09,9;UBERON:0010009,1.59e-09,9;UBERON:0010011,1.59e-09,9;UBERON:0000454,1.59e-09,9;UBERON:0009663,2.14e-09,7;UBERON:0001872,2.36e-09,5;UBERON:0003076,6.93e-09,15;UBERON:0003057,6.93e-09,15;UBERON:0000025,7.74e-08,192;UBERON:0001896,7.24e-07,3;UBERON:0005290,7.24e-07,3;UBERON:0010096,7.24e-07,3 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0.436882744260345,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0.612002073732759,0.313454721478088,1.14494394852423,0.410623275218653,0.125542639594803,0.0764134057479513,0,0.236132343941038,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,4.92614043327834,5.18229865630367,6.43938919085466,0.436194716338694,0,0,1.39457422143411,1.23350366406548,0.929119112685311,0.575384784644301,1.5369642391746,0.709446689665756,0.344745680736619,0,0,0.376484679085209,0.545812300115692,0.674170453335254,0,0.320929027076094,0,1.31940520074686,0.797854630486527,2.13112375266347,0.290209238628584,0,0.622822248995575,0.75374599577023,0.521482918420201,0.65156653411535,0.605399502633369,0,0.632924774881769,0.211255286311942,0.637812899895131,0.838634582033504,0.112328631146495,0.150176892841506,0.16072558669708,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,1.34140171940727,0.639312809217652,0.722878304769133,0,0.869079113764942,0,0.486634870302636,0.378139268656271,0.221729397462564,0.351339142772504,0.851363990735132,0,0,1.62273696827342,1.56716763569341,0.930705723632056,0,0,0,0.79504962946682,0.860234595106124,0.347140501607594,2.26123176769604,0,0,0.208994966536811,0.775250277507987,0.71153252537342,0.66944122552934,0,0,0.976248230192678,0.367663080345869,0,0.267899184852239,0.44905874525234,0.675668882899933,0,0.949265659568129,0.549605231791222,0,0,0,0,0.379891534993739,0.397227542439656,1.43418310374407,0.709336764396714,0,0,0.74000264525148,0.933633106199299,0.404132016209064,0.490385709340376,1.05950199351452,0.576175924479999,0,0.624320153660641,0.570471821544449,0.149448680551801,0.117434498643765,0.809364721840658,0.280901613404497,1.22492502752936,0.122834317311768,0.413303124703062,0,0.989067717114227,0,0,0.168336113954066,0.500474079487857,0.277064115484183,0,0.612975591598039,0,0.340296549480063,0,0,0.423863802319124,0,0.103052529238439,0.515281080091258,0,0,0,0.252433774244115,0.368199594569197,0.161646056818812,0,0.302256294682921,0.169560592310488,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,1.28648187638577,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0.738155454624648,0,0.8231480226628,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0.325808305310325,0,0,0.811512834825538,0.587043471179108,0,0,0.380508304469197,0,0,5.17055712783534,0.468008530278475,2.37809859661965,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0.829312462163088,1.29707958075265,0.25248486685276,0.063497894292169,0,0,0,0.205654985406647,0,0.857479297891735,0.784917590417525,0,0.22001485746285,0.258543431515556,0,0,0.531876233169741,1.04007436911366,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0.791951872933429,0.904318131178758,0,0.499864955910285,7.29742683847143,4.52031382288914,2.10833939483032,0.239624855491583,0,0,0.434343920002738,0,0,0,0,0,0,1.27047312111232,2.60279707715243,0.773288812777695,0.502548796003046,0.637938751653163,0,0,0,0.736148950314839,0,0.271265023699736,0.831883446123229,0.178428988797162,0.473107245101804,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.521301686808497,0.587403472388222,0.343143423810856,0,0,0,0,0,0,0.744323423456331,0.920771839728375,0.561320188866147,0.512556597022804,1.02341449813341,0.321707842287215,0,0.616838775210622,0,0.574890092096664,0,0.581051892299796,0.846016147141356,0,0.0920809889358963,0.459257792658427,0.364182336013434,0.393373244878272,0,0,0,0,0.211103257785751,0,0.510281115829547,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0.9273691048295,0.27470839445503,0.165018999841176,0,0.650060246036521,0,0.290012154876366,0.308097234229289,0,0.551346289938122,0.429680979473094,0.435050081742686,0.681813019328807,0.178064071293475,0,0,0,0,0.464845549297286,0,0.6970372701606,0.308033580176089,1.06461206063404,0.869932992075073,0.55597265731176,0.143124886741991,0.744316738719335,0.632758849437452,0.38126038784765,0.511795582622668,0,0,0,0.539617372749944,0,0.117812402345686,0,0,0.421258456238981,0,0.487426979262569,1.05650146756755,0.136499911407986,0.707027159768564,0,0.551365343546124,0,0.876901770507525,0.578775534266688,1.31178950409327,0.202910376962704,0,0,0,0.294747123039363,0.35667105148125,0.354761064070598,1.26664581178598,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0.994147647766298,1.40669416410513,0.222617410045812,0,0,1.39473591775749,1.65770349318689,0,0.20453736500431,0.738508832766417,0,0,0,0.511572370226872,1.1837208676432,0,0,0,1.39152147242777,1.99613798001194,0,0,1.44999915086959,0,0,0,0,0.874813840149763,0.520874984799877,0.885741385813839,1.4471572635049,0,0.774054819518572,0.591095237907095,1.53569778007781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| ||
|short_description=p5@RGL1 | |||
}} | }} |
Latest revision as of 04:02, 19 September 2015
Short description: | p5@RGL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RGL1_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 0bp_to_ENST00000539189_5end |
EntrezGene: | RGL1 |
HGNC: | 30281 |
UniProt: | F5H6U6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.29e-09 | 6 |
adult endothelial progenitor cell | 1.09e-07 | 3 |